BLASTX nr result

ID: Lithospermum22_contig00029057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029057
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transp...   137   9e-31
emb|CBI16927.3| unnamed protein product [Vitis vinifera]              137   9e-31
emb|CAN75802.1| hypothetical protein VITISV_016976 [Vitis vinifera]   135   3e-30
ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago t...   128   5e-28
gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago trun...   128   5e-28

>ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transport protein BIG-like
            [Vitis vinifera]
          Length = 6279

 Score =  137 bits (345), Expect = 9e-31
 Identities = 79/159 (49%), Positives = 100/159 (62%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2    LDSLDNAFILFDPHIAKSYFTFLVQLSRGESLIVPLLRRTVVLIEKLSVDEHSLHGLKHI 181
            L SLD AFILFD H AKSYF F+VQLSRGESL+ PLL+RTV L+EKL+ DE  L GLK +
Sbjct: 2559 LISLDTAFILFDIHTAKSYFHFIVQLSRGESLMKPLLKRTVALMEKLAGDEGLLQGLKFL 2618

Query: 182  FGFLAMVLDECGSNKHLVEKHSAKFLSGSYSAVGSISAGSMGSRINSDTLILPANQ-GAP 358
            FGFL  VL +C SNK  +EK   K  S     VG +++  +GSR NS+TL+L ANQ    
Sbjct: 2619 FGFLGTVLSDCRSNKSTLEKSPGKPFSSGSIGVGPVASRPVGSRKNSETLVLSANQETGS 2678

Query: 359  TSLXXXXXXXXXXXXXXXXXXXMVAVYKDDEEDANSERS 475
             SL                   + ++ KD+E+D+NSER+
Sbjct: 2679 ASLECDATSVDEDEDDGTSDGEVASMDKDEEDDSNSERA 2717


>emb|CBI16927.3| unnamed protein product [Vitis vinifera]
          Length = 4380

 Score =  137 bits (345), Expect = 9e-31
 Identities = 79/159 (49%), Positives = 100/159 (62%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2    LDSLDNAFILFDPHIAKSYFTFLVQLSRGESLIVPLLRRTVVLIEKLSVDEHSLHGLKHI 181
            L SLD AFILFD H AKSYF F+VQLSRGESL+ PLL+RTV L+EKL+ DE  L GLK +
Sbjct: 1372 LISLDTAFILFDIHTAKSYFHFIVQLSRGESLMKPLLKRTVALMEKLAGDEGLLQGLKFL 1431

Query: 182  FGFLAMVLDECGSNKHLVEKHSAKFLSGSYSAVGSISAGSMGSRINSDTLILPANQ-GAP 358
            FGFL  VL +C SNK  +EK   K  S     VG +++  +GSR NS+TL+L ANQ    
Sbjct: 1432 FGFLGTVLSDCRSNKSTLEKSPGKPFSSGSIGVGPVASRPVGSRKNSETLVLSANQETGS 1491

Query: 359  TSLXXXXXXXXXXXXXXXXXXXMVAVYKDDEEDANSERS 475
             SL                   + ++ KD+E+D+NSER+
Sbjct: 1492 ASLECDATSVDEDEDDGTSDGEVASMDKDEEDDSNSERA 1530


>emb|CAN75802.1| hypothetical protein VITISV_016976 [Vitis vinifera]
          Length = 5622

 Score =  135 bits (340), Expect = 3e-30
 Identities = 78/159 (49%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2    LDSLDNAFILFDPHIAKSYFTFLVQLSRGESLIVPLLRRTVVLIEKLSVDEHSLHGLKHI 181
            L SLD AFILFD H AKSYF F+VQLSRGESL+ PLL+RTV L+EKL+ DE  L GLK +
Sbjct: 2213 LISLDTAFILFDIHTAKSYFHFIVQLSRGESLMKPLLKRTVALMEKLAGDEGLLQGLKFL 2272

Query: 182  FGFLAMVLDECGSNKHLVEKHSAKFLSGSYSAVGSISAGSMGSRINSDTLILPANQ-GAP 358
            FGFL  VL +C SNK  +EK   K  S     VG +++  +GSR NS+T +L ANQ    
Sbjct: 2273 FGFLGTVLSDCRSNKXTLEKSPGKPFSSGSIGVGPVASRPVGSRKNSETXVLSANQETGS 2332

Query: 359  TSLXXXXXXXXXXXXXXXXXXXMVAVYKDDEEDANSERS 475
             SL                   + ++ KD+E+D+NSER+
Sbjct: 2333 ASLECDATSVDEDEDDGTSDGEVASMDKDEEDDSNSERA 2371


>ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago truncatula]
            gi|355496574|gb|AES77777.1| E3 ubiquitin-protein ligase
            UBR4 [Medicago truncatula]
          Length = 5158

 Score =  128 bits (321), Expect = 5e-28
 Identities = 70/156 (44%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
 Frame = +2

Query: 11   LDNAFILFDPHIAKSYFTFLVQLSRGESLIVPLLRRTVVLIEKLSVDEHSLHGLKHIFGF 190
            LDNAF+LFD H+AKSYF F+VQ+SRGE L+  LL RTV+++ KL+ +E+ L GLK +FGF
Sbjct: 1466 LDNAFLLFDIHVAKSYFNFIVQISRGELLMKQLLTRTVMIMGKLAGNENLLPGLKFLFGF 1525

Query: 191  LAMVLDECGSNKHLVEKHSAKFLSGSYSAVGSISAGSMGSRINSDTLILPANQ-GAPTSL 367
            +A VL ECGS K  +++ +    +G+ + VG  SA  +GSR  S+  ++ +NQ G  TSL
Sbjct: 1526 IASVLGECGSGKTSLQRITKNCSTGNTAGVGHASARLVGSRKTSEAFVVSSNQEGGSTSL 1585

Query: 368  XXXXXXXXXXXXXXXXXXXMVAVYKDDEEDANSERS 475
                               ++++ KDD+EDANSER+
Sbjct: 1586 ECDATSVDEDEDDATSDGEVLSIDKDDDEDANSERA 1621


>gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago truncatula]
          Length = 2165

 Score =  128 bits (321), Expect = 5e-28
 Identities = 70/156 (44%), Positives = 101/156 (64%), Gaps = 1/156 (0%)
 Frame = +2

Query: 11   LDNAFILFDPHIAKSYFTFLVQLSRGESLIVPLLRRTVVLIEKLSVDEHSLHGLKHIFGF 190
            LDNAF+LFD H+AKSYF F+VQ+SRGE L+  LL RTV+++ KL+ +E+ L GLK +FGF
Sbjct: 1350 LDNAFLLFDIHVAKSYFNFIVQISRGELLMKQLLTRTVMIMGKLAGNENLLPGLKFLFGF 1409

Query: 191  LAMVLDECGSNKHLVEKHSAKFLSGSYSAVGSISAGSMGSRINSDTLILPANQ-GAPTSL 367
            +A VL ECGS K  +++ +    +G+ + VG  SA  +GSR  S+  ++ +NQ G  TSL
Sbjct: 1410 IASVLGECGSGKTSLQRITKNCSTGNTAGVGHASARLVGSRKTSEAFVVSSNQEGGSTSL 1469

Query: 368  XXXXXXXXXXXXXXXXXXXMVAVYKDDEEDANSERS 475
                               ++++ KDD+EDANSER+
Sbjct: 1470 ECDATSVDEDEDDATSDGEVLSIDKDDDEDANSERA 1505


Top