BLASTX nr result

ID: Lithospermum22_contig00028481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028481
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196467.1| transmembrane CLPTM1 family protein [Arabidopsi...    55   8e-06
ref|XP_002871342.1| transmembrane CLPTM1 family protein [Arabido...    55   8e-06
ref|XP_002871331.1| transmembrane CLPTM1 family protein [Arabido...    55   8e-06
ref|XP_002872064.1| hypothetical protein ARALYDRAFT_489219 [Arab...    54   1e-05
ref|XP_002325290.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|NP_196467.1| transmembrane CLPTM1 family protein [Arabidopsis thaliana]
           gi|9759344|dbj|BAB09999.1| cleft lip and palate
           associated transmembrane protein-like [Arabidopsis
           thaliana] gi|20466780|gb|AAM20707.1| cleft lip and
           palate associated transmembrane protein-like
           [Arabidopsis thaliana] gi|332003928|gb|AED91311.1|
           transmembrane CLPTM1 family protein [Arabidopsis
           thaliana]
          Length = 590

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 341 LEGNPYLLVVTMFVSLLHSLFDFLAFKN 258
           LEGNPYLL VTMFVS+LHS+FDFLAFKN
Sbjct: 322 LEGNPYLLGVTMFVSMLHSVFDFLAFKN 349


>ref|XP_002871342.1| transmembrane CLPTM1 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317179|gb|EFH47601.1| transmembrane CLPTM1
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 341 LEGNPYLLVVTMFVSLLHSLFDFLAFKN 258
           LEGNPYLL VTMFVS+LHS+FDFLAFKN
Sbjct: 322 LEGNPYLLGVTMFVSMLHSVFDFLAFKN 349


>ref|XP_002871331.1| transmembrane CLPTM1 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317168|gb|EFH47590.1| transmembrane CLPTM1
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 590

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 341 LEGNPYLLVVTMFVSLLHSLFDFLAFKN 258
           LEGNPYLL VTMFVS+LHS+FDFLAFKN
Sbjct: 322 LEGNPYLLGVTMFVSMLHSVFDFLAFKN 349


>ref|XP_002872064.1| hypothetical protein ARALYDRAFT_489219 [Arabidopsis lyrata subsp.
           lyrata] gi|297317901|gb|EFH48323.1| hypothetical protein
           ARALYDRAFT_489219 [Arabidopsis lyrata subsp. lyrata]
          Length = 593

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -3

Query: 341 LEGNPYLLVVTMFVSLLHSLFDFLAFKN 258
           LEGNPYLL +TMFVS+LHS+FDFLAFKN
Sbjct: 324 LEGNPYLLGITMFVSMLHSVFDFLAFKN 351


>ref|XP_002325290.1| predicted protein [Populus trichocarpa] gi|222862165|gb|EEE99671.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 24/28 (85%), Positives = 27/28 (96%)
 Frame = -3

Query: 341 LEGNPYLLVVTMFVSLLHSLFDFLAFKN 258
           LEGNPYLLV+TM VS+LHS+FDFLAFKN
Sbjct: 288 LEGNPYLLVITMVVSMLHSVFDFLAFKN 315


Top