BLASTX nr result
ID: Lithospermum22_contig00028444
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00028444 (472 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI18267.3| unnamed protein product [Vitis vinifera] 102 4e-20 ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica... 102 4e-20 ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|2... 101 6e-20 ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica... 101 7e-20 ref|XP_003559590.1| PREDICTED: probable ATP-dependent RNA helica... 100 9e-20 >emb|CBI18267.3| unnamed protein product [Vitis vinifera] Length = 1162 Score = 102 bits (253), Expect = 4e-20 Identities = 50/54 (92%), Positives = 52/54 (96%) Frame = +1 Query: 247 PLLGDPNRVLLLTCHGSMATSEQKLIFEKAAPNIRKIVLSTNMAEASITINDVV 408 PLLGDPNRVLLLTCHGSMATSEQKLIFEK PN+RKIVL+TNMAEASITINDVV Sbjct: 541 PLLGDPNRVLLLTCHGSMATSEQKLIFEKPPPNVRKIVLATNMAEASITINDVV 594 >ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera] Length = 1136 Score = 102 bits (253), Expect = 4e-20 Identities = 50/54 (92%), Positives = 52/54 (96%) Frame = +1 Query: 247 PLLGDPNRVLLLTCHGSMATSEQKLIFEKAAPNIRKIVLSTNMAEASITINDVV 408 PLLGDPNRVLLLTCHGSMATSEQKLIFEK PN+RKIVL+TNMAEASITINDVV Sbjct: 541 PLLGDPNRVLLLTCHGSMATSEQKLIFEKPPPNVRKIVLATNMAEASITINDVV 594 >ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|222865503|gb|EEF02634.1| predicted protein [Populus trichocarpa] Length = 1077 Score = 101 bits (252), Expect = 6e-20 Identities = 54/77 (70%), Positives = 60/77 (77%) Frame = +1 Query: 178 WCDTCSMGDPNRE*KAKTHTFFSPLLGDPNRVLLLTCHGSMATSEQKLIFEKAAPNIRKI 357 W D S+ D + K H PLLGDPNRVLL+TCHGSMATSEQKLIFEK PN+RKI Sbjct: 468 WEDISSLRD-----QLKAH----PLLGDPNRVLLVTCHGSMATSEQKLIFEKPPPNVRKI 518 Query: 358 VLSTNMAEASITINDVV 408 VL+TNMAEASITIND+V Sbjct: 519 VLATNMAEASITINDIV 535 >ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine max] Length = 1161 Score = 101 bits (251), Expect = 7e-20 Identities = 53/77 (68%), Positives = 60/77 (77%) Frame = +1 Query: 178 WCDTCSMGDPNRE*KAKTHTFFSPLLGDPNRVLLLTCHGSMATSEQKLIFEKAAPNIRKI 357 W D S+ D + K H PL+GDPNRVLLLTCHGSMATSEQKLIFEK PNIRK+ Sbjct: 552 WEDISSLKD-----QLKAH----PLVGDPNRVLLLTCHGSMATSEQKLIFEKPPPNIRKV 602 Query: 358 VLSTNMAEASITINDVV 408 +L+TNMAEASITIND+V Sbjct: 603 ILATNMAEASITINDIV 619 >ref|XP_003559590.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Brachypodium distachyon] Length = 1121 Score = 100 bits (250), Expect = 9e-20 Identities = 52/77 (67%), Positives = 61/77 (79%) Frame = +1 Query: 178 WCDTCSMGDPNRE*KAKTHTFFSPLLGDPNRVLLLTCHGSMATSEQKLIFEKAAPNIRKI 357 W D S+ D + K H PLLGDPNRVLLL+CHGSMAT+EQ+LIFEKA PN+RK+ Sbjct: 535 WDDISSLKD-----QLKAH----PLLGDPNRVLLLSCHGSMATAEQRLIFEKAPPNVRKV 585 Query: 358 VLSTNMAEASITINDVV 408 VL+TNMAEASITIND+V Sbjct: 586 VLATNMAEASITINDIV 602