BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028439
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268415.1| PREDICTED: pentatricopeptide repeat-containi...   414   e-113
emb|CBI38708.3| unnamed protein product [Vitis vinifera]              414   e-113
ref|XP_003614316.1| Pentatricopeptide repeat-containing protein ...   410   e-112
ref|XP_002515072.1| pentatricopeptide repeat-containing protein,...   408   e-111
ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containi...   405   e-110

>ref|XP_002268415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g05600-like [Vitis vinifera]
          Length = 503

 Score =  414 bits (1065), Expect = e-113
 Identities = 200/312 (64%), Positives = 248/312 (79%)
 Frame = -2

Query: 936 AIRWPRVLNPTQLSQLISAQNSPLKALKIFNEAKVKYPNYCHNSKVYATMINILGNTCRI 757
           +++WPR L PTQLSQ+I  Q +PL ALKIFNEAK K+PNY HN  VYATMIN+LG++ RI
Sbjct: 2   SVKWPRFLIPTQLSQMIRTQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGRI 61

Query: 756 SEMKQVIDQMKHDSCQCQDSIFVYALKTYAMSGLIDEAVSLFKSLPQFNCVSWTNSFNTI 577
           +EM++VIDQMK DSC+C+DS+F   +KTYA +G++DEAVSLFK+LPQFNCV+WT SFNT+
Sbjct: 62  AEMREVIDQMKQDSCECKDSVFSSVMKTYARAGMVDEAVSLFKTLPQFNCVNWTGSFNTL 121

Query: 576 LEIMVKENRLESACRVFLEHSHGWEVKSRTKSLTLLIEALCRIQKPDLALCVLQEMDYQG 397
           L I+VKE++LE+ACR+FLEHS GWEVKSR  SL LL++ALC+I + DLAL V QEM YQ 
Sbjct: 122 LRILVKESKLETACRLFLEHSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQC 181

Query: 396 CYPQRETYRILMKGLCEEGMFNEATHLLYSMFWRISLKGSGGDVAIYKILLDSFCDNGMI 217
           C P +E+YRILM+GLCE+G  NEATHLLYSMFWRIS KG G D+A Y+ LLD+ CDNG +
Sbjct: 182 CSPDKESYRILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGHV 241

Query: 216 KEAGDFLGKILKKGLKAPKRCHKQLDLGRLYDERMDAKEAKDLINEALIKGLVPSSESYK 37
           +EA + LGK+LKKGLKAPKRC   LDL    +   D +  K LINEALI+G VPS  SY 
Sbjct: 242 EEALEILGKVLKKGLKAPKRCRGHLDLSYCCNGE-DIERTKGLINEALIRGGVPSMASYS 300

Query: 36  TMAVDFSFTKEI 1
            MA+D    ++I
Sbjct: 301 AMAIDLYSERKI 312



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
 Frame = -2

Query: 798 YATMINILGNTCRISEMKQVIDQMKHDSCQCQDSIFVYALKTYAMSGLIDEAVSLFKSLP 619
           Y+ M   L +  +I E  QV+D+M+    +   SI+   +      G ++EAV +     
Sbjct: 299 YSAMAIDLYSERKIGEANQVLDEMRDRGFKPSLSIYEAKIAALCRCGGVEEAVKV----- 353

Query: 618 QFNCVSWTNSFNTILEIMVKENRLESACRVFLEHSHGWEVKSRTKSLTLLIEALCRIQKP 439
                             +KE  +E +C                +   ++++ LCR  K 
Sbjct: 354 ------------------IKEEMVEDSC------------VPTVRLYNIVLKGLCREGKS 383

Query: 438 DLALCVLQEMDYQ-GCYPQRETYRILMKGLCEEGMFNEATHLLYSMFWRISLKGSGGDVA 262
             A+  L++M  Q GC   +ETY IL+ GLC +G F EA+ +L  M  R S  G    V 
Sbjct: 384 AFAVGYLEKMARQVGCVADKETYSILVDGLCCDGRFVEASGILERMLIRSSSPG----VE 439

Query: 261 IYKILLDSFCDNGMIKEAGDFLGKILKKG 175
            Y  L+   C  G   +A  +L +++ +G
Sbjct: 440 TYNTLIRGLCLMGRQYDAVIWLEEMVVQG 468


>emb|CBI38708.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  414 bits (1065), Expect = e-113
 Identities = 200/312 (64%), Positives = 248/312 (79%)
 Frame = -2

Query: 936 AIRWPRVLNPTQLSQLISAQNSPLKALKIFNEAKVKYPNYCHNSKVYATMINILGNTCRI 757
           +++WPR L PTQLSQ+I  Q +PL ALKIFNEAK K+PNY HN  VYATMIN+LG++ RI
Sbjct: 2   SVKWPRFLIPTQLSQMIRTQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGRI 61

Query: 756 SEMKQVIDQMKHDSCQCQDSIFVYALKTYAMSGLIDEAVSLFKSLPQFNCVSWTNSFNTI 577
           +EM++VIDQMK DSC+C+DS+F   +KTYA +G++DEAVSLFK+LPQFNCV+WT SFNT+
Sbjct: 62  AEMREVIDQMKQDSCECKDSVFSSVMKTYARAGMVDEAVSLFKTLPQFNCVNWTGSFNTL 121

Query: 576 LEIMVKENRLESACRVFLEHSHGWEVKSRTKSLTLLIEALCRIQKPDLALCVLQEMDYQG 397
           L I+VKE++LE+ACR+FLEHS GWEVKSR  SL LL++ALC+I + DLAL V QEM YQ 
Sbjct: 122 LRILVKESKLETACRLFLEHSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQC 181

Query: 396 CYPQRETYRILMKGLCEEGMFNEATHLLYSMFWRISLKGSGGDVAIYKILLDSFCDNGMI 217
           C P +E+YRILM+GLCE+G  NEATHLLYSMFWRIS KG G D+A Y+ LLD+ CDNG +
Sbjct: 182 CSPDKESYRILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGHV 241

Query: 216 KEAGDFLGKILKKGLKAPKRCHKQLDLGRLYDERMDAKEAKDLINEALIKGLVPSSESYK 37
           +EA + LGK+LKKGLKAPKRC   LDL    +   D +  K LINEALI+G VPS  SY 
Sbjct: 242 EEALEILGKVLKKGLKAPKRCRGHLDLSYCCNGE-DIERTKGLINEALIRGGVPSMASYS 300

Query: 36  TMAVDFSFTKEI 1
            MA+D    ++I
Sbjct: 301 AMAIDLYSERKI 312


>ref|XP_003614316.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515651|gb|AES97274.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 504

 Score =  410 bits (1054), Expect = e-112
 Identities = 195/305 (63%), Positives = 246/305 (80%)
 Frame = -2

Query: 936 AIRWPRVLNPTQLSQLISAQNSPLKALKIFNEAKVKYPNYCHNSKVYATMINILGNTCRI 757
           +IRWPRVLNPT L+Q+I  Q +PLKAL+IFNEAK+KYP Y HN  VYATMINILG + R+
Sbjct: 4   SIRWPRVLNPTYLTQIIRTQKNPLKALEIFNEAKLKYPKYSHNGPVYATMINILGTSGRL 63

Query: 756 SEMKQVIDQMKHDSCQCQDSIFVYALKTYAMSGLIDEAVSLFKSLPQFNCVSWTNSFNTI 577
            EM  +I+QMK DSC+C+DS+FV A+KTYA  GL+DEA+SL+K++PQFNCV+WT SFNT+
Sbjct: 64  KEMSDLIEQMKEDSCECKDSVFVSAIKTYAKEGLVDEAISLYKNIPQFNCVNWTQSFNTL 123

Query: 576 LEIMVKENRLESACRVFLEHSHGWEVKSRTKSLTLLIEALCRIQKPDLALCVLQEMDYQG 397
           LEIMV EN+LE A  +F+E S GWEVKSR ++L LL+ ALCR  + DLAL + QEMDYQG
Sbjct: 124 LEIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDYQG 183

Query: 396 CYPQRETYRILMKGLCEEGMFNEATHLLYSMFWRISLKGSGGDVAIYKILLDSFCDNGMI 217
           CYP RE+Y I+MKGLC++   +EATHLLYSMFWRISLKG+G D+ IY+ LLD+ CDNG  
Sbjct: 184 CYPNRESYLIVMKGLCQDKRLHEATHLLYSMFWRISLKGNGEDIVIYRTLLDALCDNGKF 243

Query: 216 KEAGDFLGKILKKGLKAPKRCHKQLDLGRLYDERMDAKEAKDLINEALIKGLVPSSESYK 37
            EA + LGKIL+KGLKAPKRC+ +LD+ +  D + DA+  K  I+EAL++G VPS+ SY 
Sbjct: 244 DEAVEILGKILRKGLKAPKRCYNRLDISQCGDGK-DAEVTKRWIHEALVRGSVPSTASYT 302

Query: 36  TMAVD 22
           +MAVD
Sbjct: 303 SMAVD 307



 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
 Frame = -2

Query: 798 YATMINILGNTCRISEMKQVIDQMKHDSCQCQDSIFVYALKTYAMSGLIDEAVSLFKS-L 622
           Y +M   L    +I E  +VI +MK    + + SIF   +      G +DEA+ + +  +
Sbjct: 301 YTSMAVDLYEEGKIDEADKVIIEMKDRRFKPKHSIFEAKVAALCKVGKVDEAIKVIEEDM 360

Query: 621 PQFNCVSWTNSFNTILEIMVKENRLESACRVFLEHSHGWEVKSRTKSLTLLIEALCRIQK 442
            + NC+     +  +L+ +       S      + S      +  ++  +L+E LCR +K
Sbjct: 361 VEVNCLPNATVYTILLKNLGGVGNSTSVLESLNKMSKKVNCMADKETYCILLEMLCRERK 420

Query: 441 PDLALCVLQEMDYQGCYPQRETYRILMKGLCEEGMFNEATHLLYSMFWRISLKGSGGDVA 262
              A  +L++M  +  +P   TY +L++GLC  G   EA   L  M      +G   +++
Sbjct: 421 YLEASQLLEQMSIKSYWPCANTYNLLIEGLCSLGRQYEAVMWLEDMI----SQGKLPEIS 476

Query: 261 IYKILLDSFCDNGMIKEAGDFLGKI 187
           ++  L  SFC++GM+K + +   +I
Sbjct: 477 VWNSLASSFCNSGMMKVSTETFDRI 501


>ref|XP_002515072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545552|gb|EEF47056.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  408 bits (1049), Expect = e-111
 Identities = 194/305 (63%), Positives = 247/305 (80%)
 Frame = -2

Query: 933 IRWPRVLNPTQLSQLISAQNSPLKALKIFNEAKVKYPNYCHNSKVYATMINILGNTCRIS 754
           +RWPR+L PT LSQ+I  Q +PL AL+IF EAK KYPNY HN  VYATMI ILG++ RI+
Sbjct: 3   VRWPRLLTPTHLSQIIRNQKNPLIALRIFKEAKDKYPNYRHNGPVYATMIGILGSSGRIT 62

Query: 753 EMKQVIDQMKHDSCQCQDSIFVYALKTYAMSGLIDEAVSLFKSLPQFNCVSWTNSFNTIL 574
           EMK+V+DQM+ DSC+C+DSIF  A+KTYA  GL++EA+SLFK++PQFNCV+WT SFNT+L
Sbjct: 63  EMKEVLDQMREDSCECKDSIFANAIKTYARVGLLNEAISLFKNIPQFNCVNWTESFNTLL 122

Query: 573 EIMVKENRLESACRVFLEHSHGWEVKSRTKSLTLLIEALCRIQKPDLALCVLQEMDYQGC 394
           +IMVKE++LE+A R+FLE S+GWEVKSR +SL LL++ LC+  + D+AL V QEM+YQGC
Sbjct: 123 QIMVKESKLEAAHRLFLESSYGWEVKSRVRSLNLLMDVLCQHNRSDVALQVFQEMNYQGC 182

Query: 393 YPQRETYRILMKGLCEEGMFNEATHLLYSMFWRISLKGSGGDVAIYKILLDSFCDNGMIK 214
           YP R++YRI+M GLC++G  NEATHLLYSMFWRIS KGSG D+ IY+I LD+ CD GM++
Sbjct: 183 YPDRDSYRIVMMGLCKDGRLNEATHLLYSMFWRISQKGSGEDIVIYRIFLDALCDIGMVE 242

Query: 213 EAGDFLGKILKKGLKAPKRCHKQLDLGRLYDERMDAKEAKDLINEALIKGLVPSSESYKT 34
           +A + LGKIL+KGLKAPKRCH +LDL     +  + +  K LINEALI+G +PS  SY  
Sbjct: 243 QALEVLGKILRKGLKAPKRCHPRLDLSNCNSDG-NIETTKHLINEALIRGAIPSLSSYTA 301

Query: 33  MAVDF 19
           MAVDF
Sbjct: 302 MAVDF 306


>ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g05600-like [Glycine max]
          Length = 502

 Score =  405 bits (1041), Expect = e-110
 Identities = 194/305 (63%), Positives = 245/305 (80%)
 Frame = -2

Query: 936 AIRWPRVLNPTQLSQLISAQNSPLKALKIFNEAKVKYPNYCHNSKVYATMINILGNTCRI 757
           +IRWPRVL PT LSQ+I  Q +PLKAL IFNEAK +YPNY HN  VYATMI+ILG + R+
Sbjct: 2   SIRWPRVLTPTYLSQIIKTQKNPLKALNIFNEAKSRYPNYYHNGPVYATMISILGTSGRL 61

Query: 756 SEMKQVIDQMKHDSCQCQDSIFVYALKTYAMSGLIDEAVSLFKSLPQFNCVSWTNSFNTI 577
           +EM+ VI+QMK DSC+C+DS+FV  +KTYA +GL+DEA+SL+KS+P+FNCV+WT SFNT+
Sbjct: 62  NEMRDVIEQMKEDSCECKDSVFVSVIKTYANAGLVDEAISLYKSIPRFNCVNWTESFNTM 121

Query: 576 LEIMVKENRLESACRVFLEHSHGWEVKSRTKSLTLLIEALCRIQKPDLALCVLQEMDYQG 397
           L+IMVKENRLE A R+F+E S GWEV+S  ++L LL+ ALC+  + DLAL + QEMDYQ 
Sbjct: 122 LQIMVKENRLEIAHRLFVESSCGWEVRSLVRALNLLMYALCQKSRSDLALQLFQEMDYQS 181

Query: 396 CYPQRETYRILMKGLCEEGMFNEATHLLYSMFWRISLKGSGGDVAIYKILLDSFCDNGMI 217
           CYP R++Y ILMKGLC++   +EATHLLYSMFWRIS KG+G D+ +Y+ LLD+ CD G  
Sbjct: 182 CYPNRDSYAILMKGLCQDRRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDAGKF 241

Query: 216 KEAGDFLGKILKKGLKAPKRCHKQLDLGRLYDERMDAKEAKDLINEALIKGLVPSSESYK 37
           +EA + LGKIL+KGLKAPKRCH +LDL +L D + D + AK +I+EALIKG VPS  SY 
Sbjct: 242 EEAEEILGKILRKGLKAPKRCHSRLDLDQLSDGK-DIESAKRMIHEALIKGSVPSLASYN 300

Query: 36  TMAVD 22
            MAVD
Sbjct: 301 AMAVD 305