BLASTX nr result

ID: Lithospermum22_contig00028428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028428
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_563619.1| GRF1-interacting factor 2 [Arabidopsis thaliana...   105   5e-21
emb|CBI23070.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002272754.1| PREDICTED: uncharacterized protein LOC100257...   102   2e-20
ref|XP_002892085.1| hypothetical protein ARALYDRAFT_887341 [Arab...   102   3e-20
ref|NP_001106031.1| putative GRF-interacting factor 2 [Zea mays]...   102   4e-20

>ref|NP_563619.1| GRF1-interacting factor 2 [Arabidopsis thaliana]
           gi|75192332|sp|Q9MAL9.1|GIF2_ARATH RecName:
           Full=GRF1-interacting factor 2; Short=AtGIF2; AltName:
           Full=Transcription coactivator GIF2
           gi|6715636|gb|AAF26463.1|AC007323_4 T25K16.15
           [Arabidopsis thaliana]
           gi|15294232|gb|AAK95293.1|AF410307_1 At1g01160/F6F3_1
           [Arabidopsis thaliana] gi|20857112|gb|AAM26700.1|
           At1g01160/F6F3_1 [Arabidopsis thaliana]
           gi|21539892|gb|AAM52882.1| GRF1-interacting factor 2
           [Arabidopsis thaliana] gi|332189126|gb|AEE27247.1|
           GRF1-interacting factor 2 [Arabidopsis thaliana]
          Length = 195

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/63 (77%), Positives = 56/63 (88%)
 Frame = -3

Query: 195 PLKAVTTEEIQRCLDENKNLILAILENQNLGKLAECAQYQAILQKNLTYLAAVADAQPPP 16
           P   +TTE+IQ+ LDENK LI+AI+ENQNLGKLAECAQYQA+LQKNL YLAA+ADAQPPP
Sbjct: 18  PANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPP 77

Query: 15  STP 7
            TP
Sbjct: 78  PTP 80


>emb|CBI23070.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score =  102 bits (255), Expect = 2e-20
 Identities = 55/70 (78%), Positives = 60/70 (85%), Gaps = 2/70 (2%)
 Frame = -3

Query: 204 APS-PLKAVTTEEIQRCLDENKNLILAILENQNLGKLAECAQYQAILQKNLTYLAAVADA 28
           APS P  A+TTE+IQ+ LDENK LILAILENQNLGKLAECAQYQA LQKNL YLAA+ADA
Sbjct: 5   APSFPPTAITTEQIQKYLDENKQLILAILENQNLGKLAECAQYQAQLQKNLIYLAAIADA 64

Query: 27  QPP-PSTPSQ 1
           QPP P+ P Q
Sbjct: 65  QPPAPTVPPQ 74


>ref|XP_002272754.1| PREDICTED: uncharacterized protein LOC100257141 [Vitis vinifera]
          Length = 198

 Score =  102 bits (255), Expect = 2e-20
 Identities = 55/70 (78%), Positives = 60/70 (85%), Gaps = 2/70 (2%)
 Frame = -3

Query: 204 APS-PLKAVTTEEIQRCLDENKNLILAILENQNLGKLAECAQYQAILQKNLTYLAAVADA 28
           APS P  A+TTE+IQ+ LDENK LILAILENQNLGKLAECAQYQA LQKNL YLAA+ADA
Sbjct: 12  APSFPPTAITTEQIQKYLDENKQLILAILENQNLGKLAECAQYQAQLQKNLIYLAAIADA 71

Query: 27  QPP-PSTPSQ 1
           QPP P+ P Q
Sbjct: 72  QPPAPTVPPQ 81


>ref|XP_002892085.1| hypothetical protein ARALYDRAFT_887341 [Arabidopsis lyrata subsp.
           lyrata] gi|297337927|gb|EFH68344.1| hypothetical protein
           ARALYDRAFT_887341 [Arabidopsis lyrata subsp. lyrata]
          Length = 224

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/62 (77%), Positives = 55/62 (88%)
 Frame = -3

Query: 195 PLKAVTTEEIQRCLDENKNLILAILENQNLGKLAECAQYQAILQKNLTYLAAVADAQPPP 16
           P   +TTE+IQ+ LDENK LI+AI+ENQNLGKLAECAQYQA+LQKNL YLAA+ADAQPPP
Sbjct: 16  PTNNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPP 75

Query: 15  ST 10
            T
Sbjct: 76  PT 77


>ref|NP_001106031.1| putative GRF-interacting factor 2 [Zea mays]
           gi|146008598|gb|ABQ01229.1| putative GRF-interacting
           factor 2 [Zea mays] gi|195645654|gb|ACG42295.1| GIF2
           [Zea mays] gi|219886229|gb|ACL53489.1| unknown [Zea
           mays] gi|413920419|gb|AFW60351.1| hypothetical protein
           ZEAMMB73_768103 [Zea mays]
          Length = 220

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/70 (74%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
 Frame = -3

Query: 210 SAAPSPLKAVTTEEIQRCLDENKNLILAILENQNLGKLAECAQYQAILQKNLTYLAAVAD 31
           +AA  P   +TTE+IQ+ LDENK LILAILENQNLGKLAECAQYQA LQKNL YLAA+AD
Sbjct: 15  AAAAPPAAGITTEQIQKYLDENKQLILAILENQNLGKLAECAQYQAQLQKNLLYLAAIAD 74

Query: 30  AQP-PPSTPS 4
           AQP PP  P+
Sbjct: 75  AQPQPPQNPA 84


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