BLASTX nr result

ID: Lithospermum22_contig00028382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028382
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA63753.1| cyclin A-like protein [Nicotiana tabacum]             163   2e-38
ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]             155   3e-36
ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36
gb|AFK65510.1| cyclin A, partial [Dimocarpus longan]                  152   2e-35

>emb|CAA63753.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 314

 Score =  163 bits (412), Expect = 2e-38
 Identities = 97/174 (55%), Positives = 116/174 (66%), Gaps = 30/174 (17%)
 Frame = +2

Query: 2   TRQAKKRAAQSISAQLQPVNKKQMKRVVLGELRNVQN---------LPNEENKYPQKLVI 154
           TR AKKRAA+++   LQ  NKK   RVVLGE+RN+ N         L  + NK   K  +
Sbjct: 11  TRLAKKRAAEAMVQHLQQPNKK---RVVLGEIRNLSNQIQMFDSEPLKPKCNKQTTKRKV 67

Query: 155 QGS------------------DHPQMC---VSGIYHYLRQLESQEKRRPMVDYIGKVQKD 271
           + S                  D PQMC   VS IY YL Q+E ++KRRP+ DY+ KVQKD
Sbjct: 68  KRSVSVKEREFREEDVDSKLDDDPQMCSAYVSDIYEYLHQMEIEKKRRPLSDYLEKVQKD 127

Query: 272 VSANMRGVLIDWLVEVAEEYKLLSDTLYMAVSYIDRYMSLNVIKRQRLQLLGVS 433
           V+ANMRGVL+DWLVEVAEEYKLLSDTLY+AV+YIDRY+S+ VI RQRLQLLGVS
Sbjct: 128 VTANMRGVLVDWLVEVAEEYKLLSDTLYLAVAYIDRYLSIKVIPRQRLQLLGVS 181


>ref|XP_002327190.1| predicted protein [Populus trichocarpa] gi|222835505|gb|EEE73940.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  155 bits (392), Expect = 3e-36
 Identities = 92/169 (54%), Positives = 109/169 (64%), Gaps = 25/169 (14%)
 Frame = +2

Query: 2   TRQAKKRAAQSISAQLQPVNKKQMKRVVLGELRNVQNLP---NEENKYPQKLVIQGS--- 163
           TR AKKRAA   SA+ +P+NKK   RVVLGEL N+ N     NE +K   K     S   
Sbjct: 14  TRAAKKRAAALASAEDRPLNKK---RVVLGELPNLSNTTVSVNEVHKQKAKTKSNTSKRT 70

Query: 164 ----------------DHPQMCV---SGIYHYLRQLESQEKRRPMVDYIGKVQKDVSANM 286
                           + PQMC    S IY YL ++E   KRRP+ DYI KVQKDVS NM
Sbjct: 71  LTKKEGVFKEDVDGKPEDPQMCAPYASDIYEYLHKMEVDPKRRPLPDYIEKVQKDVSPNM 130

Query: 287 RGVLIDWLVEVAEEYKLLSDTLYMAVSYIDRYMSLNVIKRQRLQLLGVS 433
           RG+L+DWLVEVAEEYK++SDTLY+ VSYIDR++S NV+ RQRLQLLGVS
Sbjct: 131 RGILVDWLVEVAEEYKIVSDTLYLTVSYIDRFLSFNVLNRQRLQLLGVS 179


>emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 384

 Score =  155 bits (392), Expect = 3e-36
 Identities = 94/180 (52%), Positives = 113/180 (62%), Gaps = 36/180 (20%)
 Frame = +2

Query: 2   TRQAKKRAAQSISAQLQPVNKKQMKRVVLGELRNVQNLP--------NEENKYPQKLVIQ 157
           TR AKKRAA+++++  Q    K  KRVVLGE++N  NL          E  K P+    Q
Sbjct: 20  TRLAKKRAAEAMASHQQQHPSK--KRVVLGEIQNFSNLGVSQIKGLNTEPKKQPKSKQQQ 77

Query: 158 GS-------------------------DHPQMC---VSGIYHYLRQLESQEKRRPMVDYI 253
                                      D PQMC   VS IY YLR++E +EKRRP+ DY+
Sbjct: 78  SKRKLKRAVTSKIDKEELNVDNVDANYDDPQMCSAYVSDIYDYLRKMEIEEKRRPLPDYL 137

Query: 254 GKVQKDVSANMRGVLIDWLVEVAEEYKLLSDTLYMAVSYIDRYMSLNVIKRQRLQLLGVS 433
            KVQKD+S NMRGVL+DWLVEVAEEYKLLSDTLY+AVSYIDR++S NVI RQ+LQLLGVS
Sbjct: 138 EKVQKDLSPNMRGVLVDWLVEVAEEYKLLSDTLYLAVSYIDRFLSTNVITRQKLQLLGVS 197


>ref|XP_002301157.1| predicted protein [Populus trichocarpa] gi|222842883|gb|EEE80430.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  154 bits (389), Expect = 7e-36
 Identities = 91/169 (53%), Positives = 107/169 (63%), Gaps = 25/169 (14%)
 Frame = +2

Query: 2   TRQAKKRAAQSISAQLQPVNKKQMKRVVLGELRNVQNL---PNEENKYPQKL-------- 148
           TR AKKRAA   S + QP+NKK   RVVLGEL N+ N     NE  K   K         
Sbjct: 11  TRAAKKRAAALASTEDQPLNKK---RVVLGELPNLSNAIVSSNEPQKQKAKAKPKARKGA 67

Query: 149 -----------VIQGSDHPQMCV---SGIYHYLRQLESQEKRRPMVDYIGKVQKDVSANM 286
                      V    + PQMC    S IY YL ++E   KRRP+ DYI KVQKDVS NM
Sbjct: 68  STKKEGVLKEDVDGNPEDPQMCAPYASDIYEYLHKMEVDPKRRPLPDYIEKVQKDVSPNM 127

Query: 287 RGVLIDWLVEVAEEYKLLSDTLYMAVSYIDRYMSLNVIKRQRLQLLGVS 433
           RG+L+DWLVEVAEEYKL+S+TLY+ VSY+DR++S NV+ RQRLQLLGVS
Sbjct: 128 RGILVDWLVEVAEEYKLVSETLYLTVSYVDRFLSFNVLSRQRLQLLGVS 176


>gb|AFK65510.1| cyclin A, partial [Dimocarpus longan]
          Length = 382

 Score =  152 bits (385), Expect = 2e-35
 Identities = 91/174 (52%), Positives = 110/174 (63%), Gaps = 30/174 (17%)
 Frame = +2

Query: 2   TRQAKKRAAQSISAQLQPVNKKQMKRVVLGELRNVQNLPNEENKYPQKL----------- 148
           TR AKKRAA ++ +  QP+ +K   RVVLGEL  + N     N+ PQK            
Sbjct: 11  TRAAKKRAAFAVVSDEQPLTQK---RVVLGELPTLSNAIVPLNRGPQKPRGKTKPKRKAK 67

Query: 149 ----------------VIQGSDHPQMC---VSGIYHYLRQLESQEKRRPMVDYIGKVQKD 271
                           V   SD+PQMC    + IY YLR +E + KRRP+ DYI KVQKD
Sbjct: 68  RALEPPKVAKKEDVVDVDFTSDNPQMCGAYATDIYEYLRDMEVEPKRRPLPDYIEKVQKD 127

Query: 272 VSANMRGVLIDWLVEVAEEYKLLSDTLYMAVSYIDRYMSLNVIKRQRLQLLGVS 433
           VSANMRG+L+DWLVEV+EEYKL SDTLY+ VSYID ++SLNVI RQ+LQLLGVS
Sbjct: 128 VSANMRGILVDWLVEVSEEYKLFSDTLYLTVSYIDGFLSLNVINRQKLQLLGVS 181


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