BLASTX nr result

ID: Lithospermum22_contig00028377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028377
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273844.1| PREDICTED: UPF0187 protein At3g61320, chloro...    94   2e-17
ref|XP_002511848.1| conserved hypothetical protein [Ricinus comm...    82   4e-14
ref|XP_002320128.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|NP_191691.2| Bestrophin-like protein [Arabidopsis thaliana] ...    75   4e-12
emb|CAB71062.1| putative protein [Arabidopsis thaliana]                75   4e-12

>ref|XP_002273844.1| PREDICTED: UPF0187 protein At3g61320, chloroplastic [Vitis
           vinifera]
          Length = 419

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/105 (47%), Positives = 62/105 (59%)
 Frame = +1

Query: 82  MENSTRLIQPPTDXXXXXXXXXXXXXXRFHNPSFACKNVKLTFRVNSSSHPSQSHRPAST 261
           M   T  IQ PT+               FH      K  KL+FRV SS        P+ST
Sbjct: 1   MRKPTHSIQLPTNLAPYSSLKTIP---NFHFLPLPSKPTKLSFRVFSSRSADSPPPPSST 57

Query: 262 KQSTLVSLLRALPDWADRIKERGVKKKRTLYNHETWVQHRSSLRH 396
           +  TL+S+LR +PDWAD IKERG+++KR+LYNHETWV+HRSS RH
Sbjct: 58  QNLTLISILRTVPDWADAIKERGMQQKRSLYNHETWVEHRSSRRH 102


>ref|XP_002511848.1| conserved hypothetical protein [Ricinus communis]
           gi|223549028|gb|EEF50517.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 417

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 39/69 (56%), Positives = 49/69 (71%)
 Frame = +1

Query: 190 KNVKLTFRVNSSSHPSQSHRPASTKQSTLVSLLRALPDWADRIKERGVKKKRTLYNHETW 369
           K   L+ +   S  P   H+   T   TL+SLLRA+PDW+DRIKERG+++KRTLYNH  W
Sbjct: 42  KKSNLSLKTLCSKPPPNPHK---TLTLTLISLLRAIPDWSDRIKERGMQQKRTLYNHNKW 98

Query: 370 VQHRSSLRH 396
           V+HRSSLRH
Sbjct: 99  VEHRSSLRH 107


>ref|XP_002320128.1| predicted protein [Populus trichocarpa] gi|222860901|gb|EEE98443.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = +1

Query: 274 LVSLLRALPDWADRIKERGVKKKRTLYNHETWVQHRSSLRH 396
           + SLLRA+PDWADR+KERG++KKR+LYNHE WV+HRSS RH
Sbjct: 1   ITSLLRAIPDWADRVKERGMRKKRSLYNHEKWVEHRSSFRH 41


>ref|NP_191691.2| Bestrophin-like protein [Arabidopsis thaliana]
           gi|20141056|sp|Q9M2D2.2|YU88_ARATH RecName: Full=UPF0187
           protein At3g61320, chloroplastic; Flags: Precursor
           gi|16604549|gb|AAL24280.1| AT3g61320/T20K12_220
           [Arabidopsis thaliana] gi|23296291|gb|AAN12915.1|
           At3g61320/T20K12_220 [Arabidopsis thaliana]
           gi|332646666|gb|AEE80187.1| Bestrophin-like protein
           [Arabidopsis thaliana]
          Length = 410

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/58 (58%), Positives = 42/58 (72%)
 Frame = +1

Query: 223 SSHPSQSHRPASTKQSTLVSLLRALPDWADRIKERGVKKKRTLYNHETWVQHRSSLRH 396
           SS P  +     T    L+ LLRA+PDWAD IKERG+++KR+LY HE WV+HRSSLRH
Sbjct: 42  SSGPESNDSGHETLTDKLIHLLRAVPDWADEIKERGMQQKRSLYTHEKWVEHRSSLRH 99


>emb|CAB71062.1| putative protein [Arabidopsis thaliana]
          Length = 406

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/58 (58%), Positives = 42/58 (72%)
 Frame = +1

Query: 223 SSHPSQSHRPASTKQSTLVSLLRALPDWADRIKERGVKKKRTLYNHETWVQHRSSLRH 396
           SS P  +     T    L+ LLRA+PDWAD IKERG+++KR+LY HE WV+HRSSLRH
Sbjct: 38  SSGPESNDSGHETLTDKLIHLLRAVPDWADEIKERGMQQKRSLYTHEKWVEHRSSLRH 95


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