BLASTX nr result

ID: Lithospermum22_contig00028371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028371
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   146   4e-33
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...   145   7e-33
gb|EEE55075.1| hypothetical protein OsJ_02804 [Oryza sativa Japo...   145   9e-33
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   144   2e-32
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...   143   3e-32

>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  146 bits (368), Expect = 4e-33
 Identities = 65/136 (47%), Positives = 93/136 (68%), Gaps = 5/136 (3%)
 Frame = -1

Query: 678 LGTSKKVKFSSILNRVKVKVE-----LLSKAGKEVFVKSVLQTIPNYPMQCFLLPKQVCN 514
           +G S+K  F  I  ++  +++     LLSKAGKE+ +K+V Q+IP Y M CF L K +C+
Sbjct: 338 IGKSRKKPFEYIKKKIWSRIQGWQEKLLSKAGKEILIKAVAQSIPTYAMSCFDLTKGLCD 397

Query: 513 KINSILSNYWWGATENKKTIHWASWKKLYITKENGGLGFSDLRLFNLALLSKQVWRIITD 334
           +++SI+  YWW   +    IHW SW+KL  +KE GGLGF DL LFNLA+LS+Q WR++T+
Sbjct: 398 ELSSIIGRYWWSQQDKANKIHWISWEKLTQSKEKGGLGFRDLHLFNLAMLSRQAWRLLTN 457

Query: 333 PQSQLARIYKAKYFPH 286
           P S   ++ KA+YFPH
Sbjct: 458 PDSLCGQVLKARYFPH 473


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  145 bits (366), Expect = 7e-33
 Identities = 69/148 (46%), Positives = 96/148 (64%), Gaps = 5/148 (3%)
 Frame = -1

Query: 678 LGTSKKVKFSSILNRVKVKV-----ELLSKAGKEVFVKSVLQTIPNYPMQCFLLPKQVCN 514
           +G SK+     +  RV  ++     + LS AG+EV +KSV Q IP Y M CF LP  VC+
Sbjct: 6   VGHSKRAVLGFVKERVWTRLNGWKEKFLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCH 65

Query: 513 KINSILSNYWWGATENKKTIHWASWKKLYITKENGGLGFSDLRLFNLALLSKQVWRIITD 334
           +I S++ N+WW   E  + IHW SWK+L  +K  GG+GF  L+ FN ALL+KQ WR++  
Sbjct: 66  EIESMVCNFWWXQKEETRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQR 125

Query: 333 PQSQLARIYKAKYFPHGTFWDAKLGENP 250
           PQS +AR++KA+YFP  +F DA +G NP
Sbjct: 126 PQSLVARVFKARYFPQTSFLDALVGSNP 153


>gb|EEE55075.1| hypothetical protein OsJ_02804 [Oryza sativa Japonica Group]
          Length = 287

 Score =  145 bits (365), Expect = 9e-33
 Identities = 70/146 (47%), Positives = 91/146 (62%), Gaps = 5/146 (3%)
 Frame = -1

Query: 675 GTSKKVKFSSILNRVKVKV-----ELLSKAGKEVFVKSVLQTIPNYPMQCFLLPKQVCNK 511
           G   K KF S+  R+  ++      LLS  GKEV +KSV+QTIP Y M  F LP+ VC +
Sbjct: 37  GRMCKGKFQSLQERIWKRLIIWGENLLSSGGKEVLIKSVIQTIPVYVMGIFNLPESVCEE 96

Query: 510 INSILSNYWWGATENKKTIHWASWKKLYITKENGGLGFSDLRLFNLALLSKQVWRIITDP 331
           +  +  N+WWG  + K+  HW SW+ L   K NGGLGF D RLFN ALL++Q WR+I +P
Sbjct: 97  LTKLTRNFWWGVEKGKRKTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNP 156

Query: 330 QSQLARIYKAKYFPHGTFWDAKLGEN 253
            S  AR+ KAKYFP+G+  D   G N
Sbjct: 157 DSLCARVLKAKYFPNGSLVDTSFGGN 182


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  144 bits (362), Expect = 2e-32
 Identities = 65/148 (43%), Positives = 99/148 (66%), Gaps = 5/148 (3%)
 Frame = -1

Query: 681  FLGTSKKVKFSSILNRVKVKVE-----LLSKAGKEVFVKSVLQTIPNYPMQCFLLPKQVC 517
            F+G+SKK  F +I +RV  K++      LS+AG+EV +K+V Q IP Y MQCF++PK + 
Sbjct: 765  FIGSSKKRVFQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSII 824

Query: 516  NKINSILSNYWWGATENKKTIHWASWKKLYITKENGGLGFSDLRLFNLALLSKQVWRIIT 337
            + I  +  N++WG  E ++ + W +W+KL++ K+ GGLG  +  +FN ALL+KQ WRI+T
Sbjct: 825  DGIEKMCRNFFWGQKEEERRVAWVAWEKLFLPKKEGGLGIRNFDVFNRALLAKQAWRILT 884

Query: 336  DPQSQLARIYKAKYFPHGTFWDAKLGEN 253
             P S +AR+ K KYFP   F +A++  N
Sbjct: 885  KPDSLMARVIKGKYFPRSNFLEARVSPN 912


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  143 bits (361), Expect = 3e-32
 Identities = 70/148 (47%), Positives = 95/148 (64%), Gaps = 5/148 (3%)
 Frame = -1

Query: 678 LGTSKKVKFSSILNRVKVKV-----ELLSKAGKEVFVKSVLQTIPNYPMQCFLLPKQVCN 514
           +G SK+     +  RV  ++     + LS AG+EV +KSV Q IP Y M CF LP  VC 
Sbjct: 6   VGHSKRAVLGFVKERVWSRLNGWKEKSLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCX 65

Query: 513 KINSILSNYWWGATENKKTIHWASWKKLYITKENGGLGFSDLRLFNLALLSKQVWRIITD 334
           +I S++ N+WWG  E  + IHW SWK+L  +K  GG+GF  L+ FN ALL+KQ WR+   
Sbjct: 66  EIESMVCNFWWGQKEETRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQR 125

Query: 333 PQSQLARIYKAKYFPHGTFWDAKLGENP 250
           PQS +AR++KA+YFP  +F DA +G NP
Sbjct: 126 PQSLVARVFKARYFPQTSFLDALVGSNP 153


Top