BLASTX nr result

ID: Lithospermum22_contig00028370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028370
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]   164   7e-39
gb|AAX62235.1| reverse transcriptase [Peperomia caperata] gi|620...   161   5e-38
gb|AAX62236.1| reverse transcriptase [Peperomia caperata]             161   5e-38
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]   161   5e-38
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]     160   1e-37

>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
          Length = 1495

 Score =  164 bits (415), Expect = 7e-39
 Identities = 73/86 (84%), Positives = 85/86 (98%)
 Frame = -1

Query: 260 GTMRLCIDYRQLNKVTIKNRYPLPRIDDLFDQLRGARVFSKIDLRSGYHQLRIKEEDISK 81
           GT+RLCIDYR+LN+VT+KN+YPLPRIDDLFDQL+GA+ FSKIDLR+GYHQLR++EED+SK
Sbjct: 680 GTLRLCIDYRKLNRVTVKNKYPLPRIDDLFDQLKGAKYFSKIDLRTGYHQLRVREEDVSK 739

Query: 80  SAFRTRYGHYEFLVMPFGLTNAPAAF 3
           +AFRTRYGHYEFLVMPFGLTNAPAAF
Sbjct: 740 TAFRTRYGHYEFLVMPFGLTNAPAAF 765


>gb|AAX62235.1| reverse transcriptase [Peperomia caperata]
           gi|62082819|gb|AAX62237.1| reverse transcriptase
           [Peperomia caperata]
          Length = 116

 Score =  161 bits (408), Expect = 5e-38
 Identities = 74/86 (86%), Positives = 83/86 (96%)
 Frame = -1

Query: 260 GTMRLCIDYRQLNKVTIKNRYPLPRIDDLFDQLRGARVFSKIDLRSGYHQLRIKEEDISK 81
           GT RLC+DYR+LNKVTIKN+YPLPRIDDLFDQL+GA VFSKIDLRSGYHQL+I+++DI K
Sbjct: 1   GTFRLCVDYRELNKVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLKIQDKDIPK 60

Query: 80  SAFRTRYGHYEFLVMPFGLTNAPAAF 3
           +AFRTRYGHYEFLVMPFGLTNAPAAF
Sbjct: 61  TAFRTRYGHYEFLVMPFGLTNAPAAF 86


>gb|AAX62236.1| reverse transcriptase [Peperomia caperata]
          Length = 116

 Score =  161 bits (408), Expect = 5e-38
 Identities = 74/86 (86%), Positives = 83/86 (96%)
 Frame = -1

Query: 260 GTMRLCIDYRQLNKVTIKNRYPLPRIDDLFDQLRGARVFSKIDLRSGYHQLRIKEEDISK 81
           GT RLC+DYR+LNKVTIKN+YPLPRIDDLFDQL+GA VFSKIDLRSGYHQL+I+++DI K
Sbjct: 2   GTFRLCVDYRELNKVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLKIQDKDIPK 61

Query: 80  SAFRTRYGHYEFLVMPFGLTNAPAAF 3
           +AFRTRYGHYEFLVMPFGLTNAPAAF
Sbjct: 62  TAFRTRYGHYEFLVMPFGLTNAPAAF 87


>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
          Length = 1387

 Score =  161 bits (408), Expect = 5e-38
 Identities = 72/86 (83%), Positives = 84/86 (97%)
 Frame = -1

Query: 260 GTMRLCIDYRQLNKVTIKNRYPLPRIDDLFDQLRGARVFSKIDLRSGYHQLRIKEEDISK 81
           GT+RLCIDYR+LN+VT+KN+YPLPRIDDLFDQL+GA+ FSKIDLR+ YHQLR++EED+SK
Sbjct: 549 GTLRLCIDYRKLNRVTVKNKYPLPRIDDLFDQLKGAKYFSKIDLRTXYHQLRVREEDVSK 608

Query: 80  SAFRTRYGHYEFLVMPFGLTNAPAAF 3
           +AFRTRYGHYEFLVMPFGLTNAPAAF
Sbjct: 609 TAFRTRYGHYEFLVMPFGLTNAPAAF 634


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/86 (87%), Positives = 81/86 (94%)
 Frame = -1

Query: 260  GTMRLCIDYRQLNKVTIKNRYPLPRIDDLFDQLRGARVFSKIDLRSGYHQLRIKEEDISK 81
            GTMR+CIDYRQLNKVT+KNRYP+PRIDDLFDQL+GA VFSKIDLRSGYHQLRI+  DI K
Sbjct: 898  GTMRMCIDYRQLNKVTVKNRYPMPRIDDLFDQLQGAAVFSKIDLRSGYHQLRIRAADIPK 957

Query: 80   SAFRTRYGHYEFLVMPFGLTNAPAAF 3
            +AFRTRYGHYEFLVM FGLTNAPAAF
Sbjct: 958  TAFRTRYGHYEFLVMSFGLTNAPAAF 983


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