BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028318
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   194   1e-47
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   194   2e-47
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi...   193   3e-47
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              189   3e-46
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   183   2e-44

>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  194 bits (493), Expect = 1e-47
 Identities = 107/233 (45%), Positives = 142/233 (60%), Gaps = 24/233 (10%)
 Frame = -2

Query: 633 SPPVCCTGRIGGG-------------ASCGVAKMR-RHLL------KYFS-YLPVKYRAF 517
           +PP  C   IGG               +  +A  R RH+L      +Y S +LP + R  
Sbjct: 37  APPNMCLSLIGGSETESHGGPTHPFSTNLTLASARWRHILAPTLKSRYTSKFLPPRRRPI 96

Query: 516 QL---AASCIDASTNYNKNDKTAIDFEVLFRSCTSIFVIKQLHALLIVSGKAESRYGSTR 346
           QL   A S    S+    N    IDF  LF S T     K LHALL+V+GK +S + STR
Sbjct: 97  QLFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTR 156

Query: 345 LVNLYAHLGDILLSRCTFNHMSNKDAYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRP 166
           LVNLYA+LGD+ LSRCTF+ +  KD Y+WNSM+SAYV  G   +A+ CF ++LL S++RP
Sbjct: 157 LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 216

Query: 165 DHYTFPPLLKGCGNLNDGARLHCWVVKLNFEWDVFVSSILVHMYCRLGYSEVA 7
           D YTFPP+LK CG L DG ++HCW  KL F+W+VFV++ L+HMY R G++ +A
Sbjct: 217 DFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIA 269



 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 39/153 (25%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
 Frame = -2

Query: 450 FEVLFRSCTSIFVIKQLHALLIVSGKAESRYGSTRLVNLYAHLGDILLSRCTFNHMSNKD 271
           F  + ++C ++   +++H      G   + + +  L+++Y+  G   ++R  F+ M  +D
Sbjct: 221 FPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRD 280

Query: 270 AYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRPDHYTFPPLLKGC---GNLNDGARLH 100
             SWN+M+S  ++ G +  A++  +EM L   ++ +  T   +L  C   G+++    +H
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRL-EGIKMNFVTVVSILPVCPQLGDISTAMLIH 339

Query: 99  CWVVKLNFEWDVFVSSILVHMYCRLGYSEVAHR 1
            +V+K   E+D+FVS+ L++MY + G  E A +
Sbjct: 340 LYVIKHGLEFDLFVSNALINMYAKFGNLEDARK 372



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
 Frame = -2

Query: 345 LVNLYAHLGDILLSRCTFNHMSNKDAYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRP 166
           +V++YA LG +  +   F  +  KD  SWN++++ Y + G + +A+  +  M    ++ P
Sbjct: 459 VVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 518

Query: 165 DHYTFPPLLKG---CGNLNDGARLHCWVVKLNFEWDVFVSSILVHMYCRLG 22
           +  T+  +L      G L  G ++H  V+K N   DVFV++ L+ +Y + G
Sbjct: 519 NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCG 569


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  194 bits (492), Expect = 2e-47
 Identities = 98/190 (51%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
 Frame = -2

Query: 567 RHLLKYFSYLPVKYRAFQL---AASCIDASTNYNKNDKTAIDFEVLFRSCTSIFVIKQLH 397
           RH  K+   LP + R  QL   A S    S+    N    IDF  LF S T     K LH
Sbjct: 83  RHTSKF---LPPRRRPIQLFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPFAKCLH 139

Query: 396 ALLIVSGKAESRYGSTRLVNLYAHLGDILLSRCTFNHMSNKDAYSWNSMMSAYVRCGRSG 217
           ALL+V+GK +S + STRLVNLYA+LGD+ LSRCTF+ +  KD Y+WNSM+SAYV  G   
Sbjct: 140 ALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFH 199

Query: 216 DAMNCFNEMLLTSDVRPDHYTFPPLLKGCGNLNDGARLHCWVVKLNFEWDVFVSSILVHM 37
           +A+ CF ++LL S++RPD YTFPP+LK CG L DG R+HCW  KL F+W+VFV++ L+HM
Sbjct: 200 EAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHM 259

Query: 36  YCRLGYSEVA 7
           Y R G++ +A
Sbjct: 260 YSRFGFTGIA 269



 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 39/153 (25%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
 Frame = -2

Query: 450 FEVLFRSCTSIFVIKQLHALLIVSGKAESRYGSTRLVNLYAHLGDILLSRCTFNHMSNKD 271
           F  + ++C ++   +++H      G   + + +  L+++Y+  G   ++R  F+ M  +D
Sbjct: 221 FPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRD 280

Query: 270 AYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRPDHYTFPPLLKGC---GNLNDGARLH 100
             SWN+M+S  ++ G +  A++  +EM L   ++ +  T   +L  C   G+++    +H
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRL-EGIKMNFVTVVSILPVCPQLGDISTAMLIH 339

Query: 99  CWVVKLNFEWDVFVSSILVHMYCRLGYSEVAHR 1
            +V+K   E+D+FVS+ L++MY + G  E A +
Sbjct: 340 LYVIKHGLEFDLFVSNALINMYAKFGNLEDARK 372



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
 Frame = -2

Query: 345 LVNLYAHLGDILLSRCTFNHMSNKDAYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRP 166
           +V++YA LG +  +   F  +  KD  SWN++++ Y + G + +A+  +  M    ++ P
Sbjct: 459 VVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 518

Query: 165 DHYTFPPLLKG---CGNLNDGARLHCWVVKLNFEWDVFVSSILVHMYCRLG 22
           +  T+  +L      G L  G R+H  V+K N   DVFV++ L+ +Y + G
Sbjct: 519 NQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCG 569


>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  193 bits (490), Expect = 3e-47
 Identities = 91/165 (55%), Positives = 119/165 (72%)
 Frame = -2

Query: 495 DASTNYNKNDKTAIDFEVLFRSCTSIFVIKQLHALLIVSGKAESRYGSTRLVNLYAHLGD 316
           D     NKN+   +DF ++FRSCT+I V KQLHALL+V GKA+     T+LV LYA LGD
Sbjct: 39  DPDNKNNKNNNVVVDFNLVFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGD 98

Query: 315 ILLSRCTFNHMSNKDAYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRPDHYTFPPLLK 136
           + LS  TF H+  K+ +SWNSM+SAYVR GR  D+M+C  E+L  S VRPD YTFPP+LK
Sbjct: 99  LSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLK 158

Query: 135 GCGNLNDGARLHCWVVKLNFEWDVFVSSILVHMYCRLGYSEVAHR 1
            C +L DG ++HCWV+K+ FE DV+V++ L+H+Y R G  EVAH+
Sbjct: 159 ACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHK 203



 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
 Frame = -2

Query: 450 FEVLFRSCTSIFVIKQLHALLIVSGKAESRYGSTRLVNLYAHLGDILLSRCTFNHMSNKD 271
           F  + ++C S+   +++H  ++  G     Y +  L++LY+  G + ++   F  M  +D
Sbjct: 153 FPPVLKACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRD 212

Query: 270 AYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRPDHYTFPPLLKGCGNLND---GARLH 100
             SWN+M+S + + G   +A+   + M  T +V+ D  T   +L  C   ND   G  +H
Sbjct: 213 VGSWNAMISGFCQNGNVAEALRVLDRM-KTEEVKMDTVTVSSMLPICAQSNDVVGGVLVH 271

Query: 99  CWVVKLNFEWDVFVSSILVHMYCRLGYSEVAHR 1
            +V+K   E DVFVS+ L++MY + G  + A R
Sbjct: 272 LYVIKHGLESDVFVSNALINMYSKFGRLQDAQR 304



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
 Frame = -2

Query: 345 LVNLYAHLGDILLSRCTFNHMSNKDAYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRP 166
           LVN+YA LG I  +R  F  + ++D  SWN++++ Y + G + +A++ +N M     + P
Sbjct: 391 LVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVP 450

Query: 165 DHYTFPPLLKG---CGNLNDGARLHCWVVKLNFEWDVFVSSILVHMYCRLGYSEVA 7
           +  T+  +L      G L  G ++H  ++K     DVFV++ L+ MY + G  E A
Sbjct: 451 NQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDA 506



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
 Frame = -2

Query: 402 LHALLIVSGKAESRYGSTRLVNLYAHLGDILLSRCTFNHMSNKDAYSWNSMMSAYVRCGR 223
           +H  +I  G     + S  L+N+Y+  G +  ++  F+ M  +D  SWNS+++AY +   
Sbjct: 270 VHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDD 329

Query: 222 SGDAMNCFNEMLLTSDVRPDHYTFPPLLKGCGNLND---GARLHCWVVKLNF-EWDVFVS 55
              A+  F EML    +RPD  T   L    G L+D   G  +H +VV+  + E D+ + 
Sbjct: 330 PVTALGFFKEMLFVG-MRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIG 388

Query: 54  SILVHMYCRLGYSEVA 7
           + LV+MY +LG  + A
Sbjct: 389 NALVNMYAKLGSIDCA 404


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  189 bits (481), Expect = 3e-46
 Identities = 86/155 (55%), Positives = 113/155 (72%)
 Frame = -2

Query: 471 NDKTAIDFEVLFRSCTSIFVIKQLHALLIVSGKAESRYGSTRLVNLYAHLGDILLSRCTF 292
           N    IDF  LF S T     K LHALL+V+GK +S + STRLVNLYA+LGD+ LSRCTF
Sbjct: 15  NQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTF 74

Query: 291 NHMSNKDAYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRPDHYTFPPLLKGCGNLNDG 112
           + +  KD Y+WNSM+SAYV  G   +A+ CF ++LL S++RPD YTFPP+LK CG L DG
Sbjct: 75  DQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDG 134

Query: 111 ARLHCWVVKLNFEWDVFVSSILVHMYCRLGYSEVA 7
            ++HCW  KL F+W+VFV++ L+HMY R G++ +A
Sbjct: 135 RKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIA 169



 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
 Frame = -2

Query: 342 VNLYAHLGDILLSRCTFNHMSNKDAYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRPD 163
           V++YA LG +  +   F  +  KD  SWN++++ Y + G + +A+  +  M    ++ P+
Sbjct: 227 VDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 286

Query: 162 HYTFPPLLKG---CGNLNDGARLHCWVVKLNFEWDVFVSSILVHMYCRLG 22
             T+  +L      G L  G ++H  V+K N   DVFV++ L+ +Y + G
Sbjct: 287 QGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCG 336


>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  183 bits (465), Expect = 2e-44
 Identities = 86/156 (55%), Positives = 114/156 (73%)
 Frame = -2

Query: 474 KNDKTAIDFEVLFRSCTSIFVIKQLHALLIVSGKAESRYGSTRLVNLYAHLGDILLSRCT 295
           KN++  IDF  LF SCT   + K+LHALL+VSGK +S + S RLVNLYA LGD+ LSR T
Sbjct: 73  KNEE--IDFNSLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGT 130

Query: 294 FNHMSNKDAYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRPDHYTFPPLLKGCGNLND 115
           F+ +  KD Y+WNSM+SAYVR G   +A++CF ++LL +  + D YTFPP+LK C  L D
Sbjct: 131 FDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD 190

Query: 114 GARLHCWVVKLNFEWDVFVSSILVHMYCRLGYSEVA 7
           G ++HCWV KL F+WDVFV++ L+HMY R G+  +A
Sbjct: 191 GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIA 226



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
 Frame = -2

Query: 519 FQLAASCIDASTNYNKNDKTAIDFEVLFRSCTSIFVIKQLHALLIVSGKAESRYGSTRLV 340
           F+ A  C        K       F  + ++C ++   +++H  +   G     + +  L+
Sbjct: 155 FREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLI 214

Query: 339 NLYAHLGDILLSRCTFNHMSNKDAYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRPDH 160
           ++Y+  G + ++R  F+ M  +D  SWN+M+S  ++ G +  A++  +EM L   +  D 
Sbjct: 215 HMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL-EGINMDS 273

Query: 159 YTFPPLLKGCGNLND---GARLHCWVVKLNFEWDVFVSSILVHMYCRLG 22
            T   +L  C  L D      +H +V+K   E+++FVS+ L++MY + G
Sbjct: 274 VTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFG 322



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
 Frame = -2

Query: 345 LVNLYAHLGDILLSRCTFNHMSNKDAYSWNSMMSAYVRCGRSGDAMNCFNEMLLTSDVRP 166
           ++++YA LG I  +   FN +  KD  SWN+++S Y + G + +A+  +  M    +++ 
Sbjct: 416 VMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKL 475

Query: 165 DHYTFPPLLKG---CGNLNDGARLHCWVVKLNFEWDVFVSSILVHMYCRLG 22
           +  T+  +L      G L  G R+H  ++K N   DVFV + L+ +Y + G
Sbjct: 476 NQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCG 526