BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028317
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    68   9e-10
ref|XP_002466537.1| hypothetical protein SORBIDRAFT_01g009615 [S...    62   4e-08
gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 10003...    62   5e-08
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...    62   6e-08
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    61   8e-08

>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/65 (49%), Positives = 42/65 (64%)
 Frame = +1

Query: 25   SYTWRSILSVRELVYKGINWKIGDGRSINIWQHKWLNHTWSRTPITPCTEYNSSLYVADL 204
            S+ WR IL+ R+L+ KG+ W IG G SIN+W   WL+ +  +TPI P TE N  L V DL
Sbjct: 840  SHGWRGILAGRDLLRKGLGWSIGQGDSINVWTEAWLSPSSPQTPIGPPTETNKDLSVHDL 899

Query: 205  IDSEV 219
            I  +V
Sbjct: 900  ICHDV 904


>ref|XP_002466537.1| hypothetical protein SORBIDRAFT_01g009615 [Sorghum bicolor]
           gi|241920391|gb|EER93535.1| hypothetical protein
           SORBIDRAFT_01g009615 [Sorghum bicolor]
          Length = 229

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/62 (45%), Positives = 42/62 (67%)
 Frame = +1

Query: 25  SYTWRSILSVRELVYKGINWKIGDGRSINIWQHKWLNHTWSRTPITPCTEYNSSLYVADL 204
           SY+WRSIL   ++V +G+ W++GDG  +NIW + W+   +SR PITP   +N    VA+L
Sbjct: 136 SYSWRSILEGLKIVKEGLIWRVGDGVGLNIWANPWIPRDFSRRPITP-RGHNILTEVAEL 194

Query: 205 ID 210
           +D
Sbjct: 195 VD 196


>gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 100033-105622 [Arabidopsis thaliana]
          Length = 1557

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/69 (40%), Positives = 42/69 (60%)
 Frame = +1

Query: 4    AQLGVKPSYTWRSILSVRELVYKGINWKIGDGRSINIWQHKWLNHTWSRTPITPCTEYNS 183
            A LG +PSY WRS+L  R+L+ KG+  +IG+G SI++W   W+     R P+      + 
Sbjct: 1172 ADLGARPSYAWRSVLHGRDLLTKGLRKEIGNGNSISVWMDNWIYDNGPRIPLQKHFSVSL 1231

Query: 184  SLYVADLID 210
            +L V DLI+
Sbjct: 1232 NLRVKDLIN 1240


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/71 (40%), Positives = 39/71 (54%)
 Frame = +1

Query: 4   AQLGVKPSYTWRSILSVRELVYKGINWKIGDGRSINIWQHKWLNHTWSRTPITPCTEYNS 183
           A LG  PSYTWRS+ S + L+  G  WKIGDG  IN+W   W+ +  S  P T    +  
Sbjct: 430 ATLGHNPSYTWRSLWSTQSLLTLGHRWKIGDGSKINVWSMPWIRNLLSLKPSTSPPLHQH 489

Query: 184 SLYVADLIDSE 216
            L V  L+ ++
Sbjct: 490 DLTVNSLLSAD 500


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/71 (40%), Positives = 43/71 (60%)
 Frame = +1

Query: 4   AQLGVKPSYTWRSILSVRELVYKGINWKIGDGRSINIWQHKWLNHTWSRTPITPCTEYNS 183
           A +G  PS+TWRSI+  R L+  G+ W++G+G SI++   KW+    S   I P +  + 
Sbjct: 147 ALVGSNPSFTWRSIVGSRRLLNAGLRWRVGNGASISVKYDKWVPRPHSFKVILPPSTLSD 206

Query: 184 SLYVADLIDSE 216
              V+DLIDSE
Sbjct: 207 DARVSDLIDSE 217