BLASTX nr result
ID: Lithospermum22_contig00028311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00028311
(1106 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001185269.1| paired amphipathic helix protein Sin3-like 5... 275 1e-71
ref|NP_176197.3| paired amphipathic helix protein Sin3-like 5 [A... 275 1e-71
ref|NP_001185267.1| paired amphipathic helix protein Sin3-like 5... 267 4e-69
ref|XP_002314629.1| SIN3 component, histone deacetylase complex ... 221 2e-55
ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ... 218 3e-54
>ref|NP_001185269.1| paired amphipathic helix protein Sin3-like 5 [Arabidopsis thaliana]
gi|332195516|gb|AEE33637.1| paired amphipathic helix
protein Sin3-like 5 [Arabidopsis thaliana]
Length = 1152
Score = 275 bits (704), Expect = 1e-71
Identities = 166/370 (44%), Positives = 213/370 (57%), Gaps = 3/370 (0%)
Frame = -3
Query: 1101 VMKDFKAQRIDTPGVIQRVKQLFVGHRQLILGFNTFLPKGYQITLAPDEGLPLTKKQVQI 922
VMKDFKAQR+DT GVI RVK LF G+ L+LGFNTFLPKGY+ITL P++ P KK V
Sbjct: 70 VMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPEDEKP--KKPVDF 127
Query: 921 DDAFSFVGKIKAKLQGDNHVFKSFLRILNMYKMENKSISEVYQEVSELFRDHPDLLSEFA 742
A FV +IKA+ GD+ +K FL ILNMY+ E KSI+EVYQEV+ LF+DH DLL EF
Sbjct: 128 QVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEFV 187
Query: 741 LFLPYDSVAATIHDSQAGRDP---SRDGLRPPMNVLKSTRDNGVKKQDSECETTLLRSNN 571
FLP + +++D R+ R+ P M+ + + D E +
Sbjct: 188 HFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTEL------S 241
Query: 570 DQRMNGDLDKLRRHDKDIRERGYDQRNFSHNGVQHDSTENNESRNNRQFPMSVKIEDHDR 391
DQR +GD + + Y + ++ G Q+P K+ED +
Sbjct: 242 DQREDGDENLV----------AYSAESLANQG---------------QWPGYPKVEDTE- 275
Query: 390 ERGGRNKVDRYNYSDGREQLKYDKGVTILSQEVSGQKVPIFSKEKYVQKSIQELDLSNCE 211
+ Y + G E+ ++ QK + ++ K+I ELDL++C
Sbjct: 276 ------GIQIYESNGGHER----------DPDIGSQKNLL--STNHMAKAINELDLTDCA 317
Query: 210 SCTPSYRLLPKDYPIPSVSQRTDIGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 31
CTPSYR LP DYPI S R +G +VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC
Sbjct: 318 QCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 377
Query: 30 EDDRFEMDML 1
EDDRFE+DML
Sbjct: 378 EDDRFELDML 387
>ref|NP_176197.3| paired amphipathic helix protein Sin3-like 5 [Arabidopsis thaliana]
gi|357529151|sp|Q9XIE1.3|SNL5_ARATH RecName: Full=Paired
amphipathic helix protein Sin3-like 5
gi|332195513|gb|AEE33634.1| paired amphipathic helix
protein Sin3-like 5 [Arabidopsis thaliana]
Length = 1162
Score = 275 bits (704), Expect = 1e-71
Identities = 166/370 (44%), Positives = 213/370 (57%), Gaps = 3/370 (0%)
Frame = -3
Query: 1101 VMKDFKAQRIDTPGVIQRVKQLFVGHRQLILGFNTFLPKGYQITLAPDEGLPLTKKQVQI 922
VMKDFKAQR+DT GVI RVK LF G+ L+LGFNTFLPKGY+ITL P++ P KK V
Sbjct: 70 VMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPEDEKP--KKPVDF 127
Query: 921 DDAFSFVGKIKAKLQGDNHVFKSFLRILNMYKMENKSISEVYQEVSELFRDHPDLLSEFA 742
A FV +IKA+ GD+ +K FL ILNMY+ E KSI+EVYQEV+ LF+DH DLL EF
Sbjct: 128 QVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEFV 187
Query: 741 LFLPYDSVAATIHDSQAGRDP---SRDGLRPPMNVLKSTRDNGVKKQDSECETTLLRSNN 571
FLP + +++D R+ R+ P M+ + + D E +
Sbjct: 188 HFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTEL------S 241
Query: 570 DQRMNGDLDKLRRHDKDIRERGYDQRNFSHNGVQHDSTENNESRNNRQFPMSVKIEDHDR 391
DQR +GD + + Y + ++ G Q+P K+ED +
Sbjct: 242 DQREDGDENLV----------AYSAESLANQG---------------QWPGYPKVEDTE- 275
Query: 390 ERGGRNKVDRYNYSDGREQLKYDKGVTILSQEVSGQKVPIFSKEKYVQKSIQELDLSNCE 211
+ Y + G E+ ++ QK + ++ K+I ELDL++C
Sbjct: 276 ------GIQIYESNGGHER----------DPDIGSQKNLL--STNHMAKAINELDLTDCA 317
Query: 210 SCTPSYRLLPKDYPIPSVSQRTDIGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 31
CTPSYR LP DYPI S R +G +VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC
Sbjct: 318 QCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 377
Query: 30 EDDRFEMDML 1
EDDRFE+DML
Sbjct: 378 EDDRFELDML 387
>ref|NP_001185267.1| paired amphipathic helix protein Sin3-like 5 [Arabidopsis thaliana]
gi|332195514|gb|AEE33635.1| paired amphipathic helix
protein Sin3-like 5 [Arabidopsis thaliana]
Length = 1158
Score = 267 bits (682), Expect = 4e-69
Identities = 164/370 (44%), Positives = 211/370 (57%), Gaps = 3/370 (0%)
Frame = -3
Query: 1101 VMKDFKAQRIDTPGVIQRVKQLFVGHRQLILGFNTFLPKGYQITLAPDEGLPLTKKQVQI 922
VMKDFKAQR+DT GVI RVK LF G+ L+LGFNTFLPKGY+ITL P++ P KK V
Sbjct: 70 VMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFLPKGYKITLQPEDEKP--KKPVDF 127
Query: 921 DDAFSFVGKIKAKLQGDNHVFKSFLRILNMYKMENKSISEVYQEVSELFRDHPDLLSEFA 742
A FV +IKA+ GD+ +K FL ILNMY+ E KSI+EVYQEV+ LF+DH DLL EF
Sbjct: 128 QVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEFV 187
Query: 741 LFLPYDSVAATIHDSQAGRDP---SRDGLRPPMNVLKSTRDNGVKKQDSECETTLLRSNN 571
FLP + +++D R+ R+ P M+ + + D E +
Sbjct: 188 HFLPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTEL------S 241
Query: 570 DQRMNGDLDKLRRHDKDIRERGYDQRNFSHNGVQHDSTENNESRNNRQFPMSVKIEDHDR 391
DQR +GD + + Y + ++ G Q+P K+ED +
Sbjct: 242 DQREDGDENLV----------AYSAESLANQG---------------QWPGYPKVEDTE- 275
Query: 390 ERGGRNKVDRYNYSDGREQLKYDKGVTILSQEVSGQKVPIFSKEKYVQKSIQELDLSNCE 211
+ Y + G E+ ++ QK + ++ K+I ELDL++C
Sbjct: 276 ------GIQIYESNGGHER----------DPDIGSQKNLL--STNHMAKAINELDLTDCA 317
Query: 210 SCTPSYRLLPKDYPIPSVSQRTDIGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 31
CTPSYR LP D P S R +G +VLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC
Sbjct: 318 QCTPSYRRLPDDIP----SYRNSLGEKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRC 373
Query: 30 EDDRFEMDML 1
EDDRFE+DML
Sbjct: 374 EDDRFELDML 383
>ref|XP_002314629.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
gi|222863669|gb|EEF00800.1| SIN3 component, histone
deacetylase complex [Populus trichocarpa]
Length = 1385
Score = 221 bits (564), Expect = 2e-55
Identities = 124/256 (48%), Positives = 164/256 (64%), Gaps = 14/256 (5%)
Frame = -3
Query: 1104 EVMKDFKAQRIDTPGVIQRVKQLFVGHRQLILGFNTFLPKGYQITLAPDEGLPLTKKQVQ 925
EVMKDFKAQRIDT GVI RVK+LF GHR LILGFNTFLPKGY+ITL ++ P KK V+
Sbjct: 42 EVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPQKKPVE 101
Query: 924 IDDAFSFVGKIKAKLQGDNHVFKSFLRILNMYKMENKSISEVYQEVSELFRDHPDLLSEF 745
++A +FV KIK + QGD+ V+KSFL ILN+Y+ ENKSISEVYQEV+ LFRDH DLL EF
Sbjct: 102 FEEAINFVNKIKTRFQGDDRVYKSFLDILNLYRKENKSISEVYQEVASLFRDHHDLLLEF 161
Query: 744 ALFLPYDSVAATIHDSQAGRDPS---RDGLRPPMNVL-----------KSTRDNGVKKQD 607
FLP S AA+ H GR+P+ R P M + + RD V + D
Sbjct: 162 THFLPDSSAAASAH-FPTGRNPALRDRSSAMPTMRQMHVDKKERATASHADRDFSVDRPD 220
Query: 606 SECETTLLRSNNDQRMNGDLDKLRRHDKDIRERGYDQRNFSHNGVQHDSTENNESRNNRQ 427
+ + +++R++ DQR + +K RR D+D RER D R++ H+G + + N R +
Sbjct: 221 PDHDRSMIRADKDQRRRAEKEKERREDRDRRERERDDRDYDHDG----NRDFNMQRLPHK 276
Query: 426 FPMSVKIEDHDRERGG 379
+ ++ED E+GG
Sbjct: 277 RKSAPRVEDSVAEQGG 292
Score = 160 bits (406), Expect = 4e-37
Identities = 87/143 (60%), Positives = 97/143 (67%), Gaps = 2/143 (1%)
Frame = -3
Query: 423 PMSVKIEDHDRERGGRNKVDRYNYSDG--REQLKYDKGVTILSQEVSGQKVPIFSKEKYV 250
P +VK+ED DR+R R + D D RE+ + DK
Sbjct: 410 PRAVKVEDRDRDRD-RERDDGVKDRDREIRERDRLDK----------------------- 445
Query: 249 QKSIQELDLSNCESCTPSYRLLPKDYPIPSVSQRTDIGAEVLNDHWVSVTSGSEDYSFKH 70
K I ELDLSNCE C+PSYRLLPK Y IPS SQRT++GAEVLNDHWVSVTSGSEDYSFKH
Sbjct: 446 TKPINELDLSNCERCSPSYRLLPKSYMIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKH 505
Query: 69 MRKNQYEESLFRCEDDRFEMDML 1
MRKNQYEESLFRCEDDRFE+DML
Sbjct: 506 MRKNQYEESLFRCEDDRFELDML 528
>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
vinifera]
Length = 1421
Score = 218 bits (554), Expect = 3e-54
Identities = 120/224 (53%), Positives = 155/224 (69%), Gaps = 14/224 (6%)
Frame = -3
Query: 1104 EVMKDFKAQRIDTPGVIQRVKQLFVGHRQLILGFNTFLPKGYQITLAPDEGLPLTKKQVQ 925
EVMKDFKAQRIDT GVI RVK+LF GHR LILGFNTFLPKGY+ITL ++ P KK V+
Sbjct: 68 EVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLEDEQPPVKKPVE 127
Query: 924 IDDAFSFVGKIKAKLQGDNHVFKSFLRILNMYKMENKSISEVYQEVSELFRDHPDLLSEF 745
++A +FV KIK + QGD+HV+KSFL ILNMY+ ENKSI+EVYQEV+ LF DHPDLL EF
Sbjct: 128 FEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAALFHDHPDLLVEF 187
Query: 744 ALFLPYDSVAATIHDSQAGRDP---SRDGLRPPMNVL-----------KSTRDNGVKKQD 607
FLP D+ AA+ + +GR+P R L PP+ + + RD V + D
Sbjct: 188 THFLP-DTSAASTQYAPSGRNPMHRERGSLVPPLRQILTDKKERITASHADRDLSVDRPD 246
Query: 606 SECETTLLRSNNDQRMNGDLDKLRRHDKDIRERGYDQRNFSHNG 475
++ + ++R++N QR G+ +K RR D+D RER D R+F H+G
Sbjct: 247 TDHDRIIMRADN-QRRGGEKEKERRDDRDRRER--DDRDFDHDG 287
Score = 194 bits (493), Expect = 3e-47
Identities = 98/148 (66%), Positives = 116/148 (78%), Gaps = 2/148 (1%)
Frame = -3
Query: 438 NNRQFPMSVKIEDHDRERGG-RNKVDRYNYSDGREQLKYDKGVTILSQEVSGQKVPIF-S 265
N P SVKIED DR+R R+ D+ + RE+ + DK +++ QK+ +F +
Sbjct: 403 NEGHLPRSVKIEDRDRDRDRERDDRDKDRDRENRERDRLDKSGGFGNKDAVNQKMSLFQN 462
Query: 264 KEKYVQKSIQELDLSNCESCTPSYRLLPKDYPIPSVSQRTDIGAEVLNDHWVSVTSGSED 85
KEKY+ K IQELDLSNCE CTPSYRLLPK+YPIPS SQRT++GAEVLND+WVSVTSGSED
Sbjct: 463 KEKYMAKPIQELDLSNCERCTPSYRLLPKNYPIPSASQRTELGAEVLNDYWVSVTSGSED 522
Query: 84 YSFKHMRKNQYEESLFRCEDDRFEMDML 1
YSFKHMRKNQYEESLFRCEDDRFE+DML
Sbjct: 523 YSFKHMRKNQYEESLFRCEDDRFELDML 550