BLASTX nr result

ID: Lithospermum22_contig00028274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028274
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75147.1| hypothetical protein VITISV_014145 [Vitis vinifera]    49   3e-07
emb|CAN77162.1| hypothetical protein VITISV_029831 [Vitis vinifera]    47   2e-06
emb|CAN65521.1| hypothetical protein VITISV_025368 [Vitis vinifera]    44   4e-06
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                       57   6e-06

>emb|CAN75147.1| hypothetical protein VITISV_014145 [Vitis vinifera]
          Length = 783

 Score = 48.5 bits (114), Expect(2) = 3e-07
 Identities = 27/58 (46%), Positives = 40/58 (68%)
 Frame = -3

Query: 886 NSKNQRH*MKGAKNSSQRFAHKVTVIEEAQDLTTMKVDELIVNLTTFEMTFKSTKSNQ 713
           NSK  R   K  ++ S+RF  KVT IEE++D+ ++KVDEL+ +L TFEMT  S + ++
Sbjct: 168 NSKVVR---KILRSLSERFRAKVTAIEESKDVDSLKVDELVGSLQTFEMTLGSPRKSK 222



 Score = 33.1 bits (74), Expect(2) = 3e-07
 Identities = 17/59 (28%), Positives = 34/59 (57%)
 Frame = -1

Query: 1041 KALSAIFCIVDAEVFKLISSYKVAKEAWEVLRTTNYKMEDIEWKKMRQFPLTTQKIKDI 865
            +A+ +IF  +  + F+ I++   AKEAW++L+ T+   ED    K+ +  + T + + I
Sbjct: 82   RAMYSIFNAISTDEFRRIATCTSAKEAWDILQVTH---EDTNAVKVSKLLMLTSRFETI 137


>emb|CAN77162.1| hypothetical protein VITISV_029831 [Vitis vinifera]
          Length = 1434

 Score = 46.6 bits (109), Expect(2) = 2e-06
 Identities = 26/58 (44%), Positives = 39/58 (67%)
 Frame = -3

Query: 886  NSKNQRH*MKGAKNSSQRFAHKVTVIEEAQDLTTMKVDELIVNLTTFEMTFKSTKSNQ 713
            NSK  R   K  ++  +RF  KVT IEE++D+ ++KVDEL+ +L TFEMT  S + ++
Sbjct: 902  NSKVVR---KILRSLPERFRAKVTAIEESKDVDSLKVDELVGSLQTFEMTLGSPRKSK 956



 Score = 32.0 bits (71), Expect(2) = 2e-06
 Identities = 14/57 (24%), Positives = 32/57 (56%)
 Frame = -1

Query: 1041 KALSAIFCIVDAEVFKLISSYKVAKEAWEVLRTTNYKMEDIEWKKMRQFPLTTQKIK 871
            +A+ +IF  +  + F+ I++   AKEAW++L+ T+     ++  K++      + I+
Sbjct: 816  RAMYSIFNAISTDEFRRIATCTSAKEAWDILQVTHEGTNAVKVSKLQMLTSRFETIR 872


>emb|CAN65521.1| hypothetical protein VITISV_025368 [Vitis vinifera]
          Length = 1291

 Score = 44.3 bits (103), Expect(2) = 4e-06
 Identities = 25/58 (43%), Positives = 38/58 (65%)
 Frame = -3

Query: 886 NSKNQRH*MKGAKNSSQRFAHKVTVIEEAQDLTTMKVDELIVNLTTFEMTFKSTKSNQ 713
           NSK  R   K  ++  +RF  KV  IEE++D+ ++KVDEL+ +L TFEMT  S + ++
Sbjct: 176 NSKVVR---KILRSFPERFKAKVIAIEESKDVDSLKVDELVGSLQTFEMTLGSPRKSK 230



 Score = 33.1 bits (74), Expect(2) = 4e-06
 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = -1

Query: 1041 KALSAIFCIVDAEVFKLISSYKVAKEAWEVLRTTNYKMEDIEWKKMRQFP--LTTQKIKD 868
            +A+ +IF ++  + F+ I++   AKEAW++L+ T+     ++  K+        T +I+D
Sbjct: 90   RAMYSIFNVISTDEFRRIATCTSAKEAWDILQVTHEGTNVVKVSKLHMLTSRFETIRIED 149

Query: 867  IE 862
             E
Sbjct: 150  HE 151


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 71/268 (26%), Positives = 119/268 (44%), Gaps = 48/268 (17%)
 Frame = -1

Query: 1041 KALSAIFCIVDAEVFKLISSYKVAKEAWEVLRTTN---------------YKMEDIEWKK 907
            KAL+A+F  VD  +F+LI++  VAK+AWE+L+TT+                K E+++ K+
Sbjct: 82   KALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSRLQLLATKFENLKMKE 141

Query: 906  ---MRQFPLTTQKI-------------KDIE*KVLRTLPR--DLHTRSL*SKKH----RI 793
               +  F +T  +I             + +  K+LR+LP+  D+   ++   +     R+
Sbjct: 142  EECIHDFHMTILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRV 201

Query: 792  *QL*KWMN***ISPPLR*HSNLQNLIKGIALKAGC-GDEDM------ENLAETVSLLAKN 634
             +L   +     +  L      +   K +A  +   G+ED       E L   V  L K 
Sbjct: 202  DELIGSLQ----TFELGLSDRTEKKSKNLAFVSNDEGEEDEYDLDTDEGLTNAVVFLGKQ 257

Query: 633  FNKTLKRFNKKLYSGGNNPSVNDKRSDKGWKNSKSEXXXXXXXXXXXXXGI*CRECEVFG 454
            FNK L R +++      N S++ ++  +  + S  +             GI CR CE +G
Sbjct: 258  FNKVLNRMDRRQKPHVRNISLDIRKGSEYQRKSDEK--------PSHSKGIQCRGCEGYG 309

Query: 453  HIQVE---YVKKQSKSYCTTLFDD-ESE 382
            HI+ E   ++KKQ K       DD ESE
Sbjct: 310  HIKAECPTHLKKQRKGLSVCRSDDTESE 337


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