BLASTX nr result

ID: Lithospermum22_contig00028263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028263
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538189.1| PREDICTED: recQ-mediated genome instability ...   150   3e-34
dbj|BAF36320.1| hypothetical protein [Ipomoea trifida]                147   3e-33
ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability ...   144   2e-32
ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|1...   142   8e-32
gb|AAS79589.1| hypothetical protein [Ipomoea trifida]                 138   2e-30

>ref|XP_003538189.1| PREDICTED: recQ-mediated genome instability protein 2-like [Glycine
           max]
          Length = 142

 Score =  150 bits (379), Expect = 3e-34
 Identities = 81/137 (59%), Positives = 100/137 (72%), Gaps = 9/137 (6%)
 Frame = +2

Query: 2   LGAVKLTCAQLKSVRQI-------SHSQNSYTLGTLLFQRAWLQGILVSTPASAVGGRFL 160
           L A+KL C+QLK  R++       S SQ+S+TLG LLFQR WLQG+LVS   ++  G  L
Sbjct: 5   LAALKLFCSQLKQAREVAMPCQTQSQSQSSFTLGGLLFQRPWLQGVLVS---ASDAGSLL 61

Query: 161 LDDGTGLIELA--GEVQNRPLDIGAYLMVVGVYVARENDLPIIKVHKIVDLSMHPYREAM 334
           LDDGT L+EL+   E ++RP  +G Y+MVVG Y AR   LP+IKVHKIVDLS  P REAM
Sbjct: 62  LDDGTDLVELSLNSEFRHRPWKLGMYVMVVGGYAARPGKLPMIKVHKIVDLSSSPNREAM 121

Query: 335 WYLEVIEAFKLFYQPVV 385
           WYLEV+EA+KLFYQP+V
Sbjct: 122 WYLEVMEAYKLFYQPLV 138


>dbj|BAF36320.1| hypothetical protein [Ipomoea trifida]
          Length = 143

 Score =  147 bits (370), Expect = 3e-33
 Identities = 78/133 (58%), Positives = 101/133 (75%), Gaps = 5/133 (3%)
 Frame = +2

Query: 2   LGAVKLTCAQLKSVRQI-SHSQNSYTLGTLLFQRAWLQGILVSTPA-SAVGGRFLLDDGT 175
           LGA+K+ C+ L +  +  SHSQ +++LG +LFQR WLQG+LVS P+ S   GRFLLDDGT
Sbjct: 5   LGALKILCSHLTTATEATSHSQPAFSLGGILFQRVWLQGVLVSKPSPSNDAGRFLLDDGT 64

Query: 176 GLIEL--AGE-VQNRPLDIGAYLMVVGVYVARENDLPIIKVHKIVDLSMHPYREAMWYLE 346
           G+IEL  +G+ +QN   ++G Y+MVVG Y  R+N    IKVHKIVDLS  P REAMWYLE
Sbjct: 65  GVIELKLSGDYLQNDAWELGMYVMVVGGYAVRKNGTSFIKVHKIVDLSPVPDREAMWYLE 124

Query: 347 VIEAFKLFYQPVV 385
           V+EAF+LFYQP++
Sbjct: 125 VVEAFRLFYQPLI 137


>ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability protein 2 [Vitis
           vinifera] gi|297734866|emb|CBI17100.3| unnamed protein
           product [Vitis vinifera]
          Length = 134

 Score =  144 bits (363), Expect = 2e-32
 Identities = 76/129 (58%), Positives = 97/129 (75%), Gaps = 2/129 (1%)
 Frame = +2

Query: 2   LGAVKLTCAQLKSVRQISHSQNSYTLGTLLFQRAWLQGILVSTPASAVGGRFLLDDGTGL 181
           L A+K+ C QL+  ++ + SQN++TLG +LFQRAWLQG+LVS    A G RF+LDDGTG+
Sbjct: 5   LAALKVMCGQLRKAKETT-SQNAFTLGGVLFQRAWLQGVLVSVSDDAQG-RFVLDDGTGV 62

Query: 182 IELA--GEVQNRPLDIGAYLMVVGVYVARENDLPIIKVHKIVDLSMHPYREAMWYLEVIE 355
           I L+  G+  +R   IG Y+MVVG Y  R  + P+IKVHKIVDLS  P RE+MWYLEVIE
Sbjct: 63  IHLSLSGDFLHRNWKIGMYVMVVGGYFVRSGEPPMIKVHKIVDLSPFPDRESMWYLEVIE 122

Query: 356 AFKLFYQPV 382
           AF+LFYQP+
Sbjct: 123 AFRLFYQPL 131


>ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|118483555|gb|ABK93675.1|
           unknown [Populus trichocarpa]
           gi|222837597|gb|EEE75962.1| predicted protein [Populus
           trichocarpa]
          Length = 134

 Score =  142 bits (358), Expect = 8e-32
 Identities = 77/130 (59%), Positives = 94/130 (72%), Gaps = 2/130 (1%)
 Frame = +2

Query: 2   LGAVKLTCAQLKSVRQISHSQNSYTLGTLLFQRAWLQGILVSTPASAVGGRFLLDDGTGL 181
           L A+KL C QLK   + + SQN+ TLG +LFQRAWLQGILVS       GR LLDDGTG+
Sbjct: 5   LAALKLLCVQLKDASE-TPSQNALTLGGILFQRAWLQGILVSNDGD---GRLLLDDGTGV 60

Query: 182 IEL--AGEVQNRPLDIGAYLMVVGVYVARENDLPIIKVHKIVDLSMHPYREAMWYLEVIE 355
           IEL  + + + R  D G Y+MVVG Y  R  + P+IKVHK+VDLS  P REAMWYLEV+E
Sbjct: 61  IELCLSPDFRLRHWDSGMYVMVVGGYFVRHGETPMIKVHKMVDLSAFPDREAMWYLEVME 120

Query: 356 AFKLFYQPVV 385
           A+KLFYQP++
Sbjct: 121 AYKLFYQPLI 130


>gb|AAS79589.1| hypothetical protein [Ipomoea trifida]
          Length = 155

 Score =  138 bits (347), Expect = 2e-30
 Identities = 78/145 (53%), Positives = 101/145 (69%), Gaps = 17/145 (11%)
 Frame = +2

Query: 2   LGAVKLTCAQLKSVRQI-SHSQNSYTLGTLLFQRAWLQGILVSTPA-SAVGGRFLLDDGT 175
           LGA+K+ C+ L +  +  SHSQ +++LG +LFQR WLQG+LVS P+ S   GRFLLDDGT
Sbjct: 5   LGALKILCSHLTTATEATSHSQPAFSLGGILFQRVWLQGVLVSKPSPSNDAGRFLLDDGT 64

Query: 176 GLIEL--AGE-VQNRPLDIGAYLMVVGVYVARENDLPIIK------------VHKIVDLS 310
           G+IEL  +G+ +QN   ++G Y+MVVG Y  R+N    IK            VHKIVDLS
Sbjct: 65  GVIELKLSGDYLQNDAWELGMYVMVVGGYAVRKNGTSFIKMRDQEECISFSKVHKIVDLS 124

Query: 311 MHPYREAMWYLEVIEAFKLFYQPVV 385
             P REAMWYLEV+EAF+LFYQP++
Sbjct: 125 PVPDREAMWYLEVVEAFRLFYQPLI 149


Top