BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028213
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   295   5e-78
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    291   6e-77
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     290   2e-76
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   288   5e-76
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     285   4e-75

>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  295 bits (754), Expect = 5e-78
 Identities = 138/201 (68%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
 Frame = -3

Query: 600 LGPENPHRMNERRRNIAPFRFIDVGVEIGLLASQDEFVVGWKGPPTGVDFFVDPFNGKCR 421
           LGPENP+R+N+RRR   PF+F DV VE+G+L S+D+FVVGW+GP TGVDFFVDPFNG C+
Sbjct: 111 LGPENPYRLNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACK 170

Query: 420 LVFTKDTVFSFKGEAKHVVIKCNFKIEFLVREINEIKEYRDFSSLVILLQLASSPLVYYR 241
           ++FTKDT FSF+GEAKH +IKCNFKIEF+VREINEIK+++DF+SLVILLQLASSPLV+YR
Sbjct: 171 ILFTKDTAFSFRGEAKHAIIKCNFKIEFMVREINEIKKFKDFTSLVILLQLASSPLVFYR 230

Query: 240 TADDDIEDSVPFXXXXXXDPWIRTTDFTPSGAIGRCNAYRISVRIRNGPNLERAIEYLRK 61
           TADDDIE+SV F      D WIRTTD T SGAIGRCN YRIS+R RNGP+ E+A+ Y   
Sbjct: 231 TADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSF 290

Query: 60  HRVRLID-CKGRKLQVHDEPD 1
           HRV +++ C  + L+V DEPD
Sbjct: 291 HRVPMVEMCNRKMLRVRDEPD 311


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  291 bits (745), Expect = 6e-77
 Identities = 137/201 (68%), Positives = 167/201 (83%), Gaps = 1/201 (0%)
 Frame = -3

Query: 600 LGPENPHRMNERRRNIAPFRFIDVGVEIGLLASQDEFVVGWKGPPTGVDFFVDPFNGKCR 421
           LGPENP+R+N+RRR   PF+F DV VE+G+L S+D+FVVGW+GP TGVDFFVDPFNG C+
Sbjct: 111 LGPENPYRLNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGTCK 170

Query: 420 LVFTKDTVFSFKGEAKHVVIKCNFKIEFLVREINEIKEYRDFSSLVILLQLASSPLVYYR 241
           ++FTKDT FSF+GEA+H +IKCNFKIEF+VREINEIK+ +DF+SLVILLQLASSPLV+YR
Sbjct: 171 ILFTKDTAFSFRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYR 230

Query: 240 TADDDIEDSVPFXXXXXXDPWIRTTDFTPSGAIGRCNAYRISVRIRNGPNLERAIEYLRK 61
           TADDDIE+SV F      D WIRTTD T SGAIGRCN YRIS+R RNGP+ E+A+ Y   
Sbjct: 231 TADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSF 290

Query: 60  HRVRLID-CKGRKLQVHDEPD 1
           HRV +++ C  + L+V DEPD
Sbjct: 291 HRVPMVEMCNRKMLRVKDEPD 311


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  290 bits (741), Expect = 2e-76
 Identities = 136/201 (67%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
 Frame = -3

Query: 600 LGPENPHRMNERRRNIAPFRFIDVGVEIGLLASQDEFVVGWKGPPTGVDFFVDPFNGKCR 421
           LGPENP+R+N+RRR   PF+F DV +E+G+L S+D+FVVGW+GP TGVDF VDPFNG C+
Sbjct: 111 LGPENPYRLNQRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACK 170

Query: 420 LVFTKDTVFSFKGEAKHVVIKCNFKIEFLVREINEIKEYRDFSSLVILLQLASSPLVYYR 241
           ++FTKDT FSF+GEA+H +IKCNFKIEFLVREINEIK+ +DF+SLVILLQLASSPLV+YR
Sbjct: 171 ILFTKDTAFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYR 230

Query: 240 TADDDIEDSVPFXXXXXXDPWIRTTDFTPSGAIGRCNAYRISVRIRNGPNLERAIEYLRK 61
           TADDDIE+SV F      D WIRTTD T SGAIGRCN YRIS+R RNGP+ E+A+ Y   
Sbjct: 231 TADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSF 290

Query: 60  HRVRLID-CKGRKLQVHDEPD 1
           HRV +++ C  + L+V DEPD
Sbjct: 291 HRVPMVEMCNRKMLRVRDEPD 311


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  288 bits (737), Expect = 5e-76
 Identities = 137/201 (68%), Positives = 165/201 (82%), Gaps = 1/201 (0%)
 Frame = -3

Query: 600 LGPENPHRMNERRRNIAPFRFIDVGVEIGLLASQDEFVVGWKGPPTGVDFFVDPFNGKCR 421
           LGPENP+R+N+RRR   PF+F DV VE+G+L S+ +FVVGW+GP TGVDF VDPFNG C+
Sbjct: 111 LGPENPYRLNQRRRTTMPFKFSDVSVEMGVLVSKHDFVVGWRGPRTGVDFLVDPFNGTCK 170

Query: 420 LVFTKDTVFSFKGEAKHVVIKCNFKIEFLVREINEIKEYRDFSSLVILLQLASSPLVYYR 241
           ++FTKDTVFSF+GEA+H +IKCNFKIEFLVREINEIK+ +DF SLVILLQLASSPLV+YR
Sbjct: 171 ILFTKDTVFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFMSLVILLQLASSPLVFYR 230

Query: 240 TADDDIEDSVPFXXXXXXDPWIRTTDFTPSGAIGRCNAYRISVRIRNGPNLERAIEYLRK 61
           TADDDIE+SV F      D WIRTTD T SGAIGRCN YRIS+R RNGP+ E+A+ Y   
Sbjct: 231 TADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSF 290

Query: 60  HRVRLID-CKGRKLQVHDEPD 1
           HRV +++ C  + L+V DEPD
Sbjct: 291 HRVPMVEMCNRKMLRVRDEPD 311


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  285 bits (729), Expect = 4e-75
 Identities = 135/201 (67%), Positives = 164/201 (81%), Gaps = 1/201 (0%)
 Frame = -3

Query: 600 LGPENPHRMNERRRNIAPFRFIDVGVEIGLLASQDEFVVGWKGPPTGVDFFVDPFNGKCR 421
           LGPENP+R+N+RRR   PF+F DV VE+G+L S+D+FVVGW+GP TGVDF VDPFNG C+
Sbjct: 111 LGPENPYRLNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCK 170

Query: 420 LVFTKDTVFSFKGEAKHVVIKCNFKIEFLVREINEIKEYRDFSSLVILLQLASSPLVYYR 241
           ++FTKDT FSF+GEA+H +IKCNFKIEFLVREINEIK+ +DF+SLVIL QLASSPLV+YR
Sbjct: 171 ILFTKDTAFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYR 230

Query: 240 TADDDIEDSVPFXXXXXXDPWIRTTDFTPSGAIGRCNAYRISVRIRNGPNLERAIEYLRK 61
           TADDDIE+SV F      D WIRTTD T SGAIGRCN YRIS+R RNGP+ E+A+ Y   
Sbjct: 231 TADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSF 290

Query: 60  HRVRLID-CKGRKLQVHDEPD 1
            RV +++ C  + L+V DEPD
Sbjct: 291 RRVPMVEMCNRKMLRVKDEPD 311