BLASTX nr result

ID: Lithospermum22_contig00028156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028156
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g...    79   3e-13
ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g...    79   3e-13
ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g...    78   8e-13
emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]    78   8e-13
ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [...    76   2e-12

>ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 643

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
 Frame = +3

Query: 84  AKRLKQPQNPWFVPPSHVALRLLCHVSRVGGLIGKSGSIIRQLQQETTAKIRIEDFPNNN 263
           +KR KQP  P  +PP HVA R+LCH SR+GG+IGKSG +I+QLQQ T  KIR+E+ P+ +
Sbjct: 42  SKRSKQPP-PLIIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSES 100

Query: 264 -----STSGSTALT 290
                +  GS ALT
Sbjct: 101 PDRVVTVIGSPALT 114


>ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 658

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
 Frame = +3

Query: 84  AKRLKQPQNPWFVPPSHVALRLLCHVSRVGGLIGKSGSIIRQLQQETTAKIRIEDFPNNN 263
           +KR KQP  P  +PP HVA R+LCH SR+GG+IGKSG +I+QLQQ T  KIR+E+ P+ +
Sbjct: 37  SKRSKQPP-PLIIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSES 95

Query: 264 -----STSGSTALT 290
                +  GS ALT
Sbjct: 96  PDRVVTVIGSPALT 109


>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 648

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/75 (49%), Positives = 49/75 (65%)
 Frame = +3

Query: 84  AKRLKQPQNPWFVPPSHVALRLLCHVSRVGGLIGKSGSIIRQLQQETTAKIRIEDFPNNN 263
           +KR K P  P  VP  HVA RLLCH SR+GG+IGKSG I++QLQ +T A+IR+ED P+ +
Sbjct: 34  SKRSKPPPPPIPVPAGHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTS 93

Query: 264 STSGSTALTPVDYHR 308
                  + P   +R
Sbjct: 94  DHRVILVIAPASVNR 108


>emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
          Length = 587

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/75 (49%), Positives = 49/75 (65%)
 Frame = +3

Query: 84  AKRLKQPQNPWFVPPSHVALRLLCHVSRVGGLIGKSGSIIRQLQQETTAKIRIEDFPNNN 263
           +KR K P  P  VP  HVA RLLCH SR+GG+IGKSG I++QLQ +T A+IR+ED P+ +
Sbjct: 34  SKRSKPPPPPIPVPAGHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTS 93

Query: 264 STSGSTALTPVDYHR 308
                  + P   +R
Sbjct: 94  DHRVILVIAPASVNR 108


>ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 663

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/58 (62%), Positives = 43/58 (74%)
 Frame = +3

Query: 90  RLKQPQNPWFVPPSHVALRLLCHVSRVGGLIGKSGSIIRQLQQETTAKIRIEDFPNNN 263
           R  +P  P  VPP HVA RLLC+ SR+GG+IGKSGS+I+ LQQ T AKIRIED P  +
Sbjct: 30  RQSKPPPPLSVPPGHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQES 87


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