BLASTX nr result
ID: Lithospermum22_contig00028144
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00028144
(1728 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM... 548 e-153
ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, put... 546 e-153
ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago... 540 e-151
gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japo... 517 e-144
ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group] g... 517 e-144
>ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
Length = 505
Score = 548 bits (1412), Expect = e-153
Identities = 272/459 (59%), Positives = 330/459 (71%), Gaps = 28/459 (6%)
Frame = +2
Query: 290 NDTQSFASDFYNSGTDCSSLLFVDNMEEIKNPE--SXXXXXXXXXXXXXXWGLSPQSLL- 460
++ SFA+DFY SGTD SSLL ++E+ K + WG +
Sbjct: 47 SEKSSFAADFYRSGTDWSSLLL--SLEDSKQSDLAQDSGKKMKQANLFQIWGFKRNDAIG 104
Query: 461 ------------------SDKPNMHPQEE-----KNSGSIEGAMXXXXXXXXXXHR--SH 565
S++ + P+ E A +
Sbjct: 105 SVESGPSKSGCCDDGGGSSERKIVKPENRCSIFPDTGKEFENAKSSRKRKGSCGENRVTR 164
Query: 566 VCPFYKKMPGTPFTVDAFRYGKVQDCAAYFLSHFHADHYGGLTKKWSHGPIYATALTARL 745
CPFYKKMPGT FTVDAFRYG V+ C+AYFL+HFH DHYGGL+KKWSHGPIY + LT RL
Sbjct: 165 SCPFYKKMPGTMFTVDAFRYGCVEGCSAYFLTHFHCDHYGGLSKKWSHGPIYCSPLTGRL 224
Query: 746 VKMCLYVDPFYIHPLEFGKEYVIEGVRVTMLEANHCPGAALIHFLLPNGACYLHTGDFRA 925
V+MCL V+P YIHPLEF +E+VI+GV+VT+LEANHCPGAALIHF LPNG YLHTGDFRA
Sbjct: 225 VQMCLSVNPLYIHPLEFNEEHVIDGVKVTLLEANHCPGAALIHFNLPNGQRYLHTGDFRA 284
Query: 926 SKSLQSYPILLNHRVNVLYLDTTYCNPKYRFPPKEEVLKFAVRVVRNHLKNHPKTLIIVG 1105
K +Q+Y +L+N RVNVLYLDTTYCNPKYRFP KEEVL + V++ +NHLK HP+TL++VG
Sbjct: 285 CKLMQAYHLLVNQRVNVLYLDTTYCNPKYRFPSKEEVLNYVVKITKNHLKIHPRTLVVVG 344
Query: 1106 AYSIGKECVYLEISKALGVKIHATASRRRILQSYGWPQISDNLCTNGRETPLHILPISSL 1285
AYSIGKECVYL ISKALGVKI+A ASRRRILQ++GWP +SD LCTNG T LH+LP+SSL
Sbjct: 345 AYSIGKECVYLAISKALGVKIYANASRRRILQAFGWPDLSDKLCTNGNNTLLHVLPMSSL 404
Query: 1286 KDEHLQSYLLSFKSQFSTVLAFRPTGWTFSETIGHNLDLIKPRTNGSITIYGVPYSEHSS 1465
+ E L+ YL ++K QF+ +LAFRPTGWTFSE I ++L+LIKP + G+ITIYGVPYSEHSS
Sbjct: 405 RVETLKDYLKTYKEQFTAILAFRPTGWTFSEKISNDLELIKPVSKGNITIYGVPYSEHSS 464
Query: 1466 FDELQEFVKFLRPEKIIPTVNVGSAVNRDKMQSYFRQWL 1582
F ELQ+FV+ LRP+KIIPTVNVG+A NR+KMQSYFR WL
Sbjct: 465 FSELQDFVQVLRPDKIIPTVNVGNAANREKMQSYFRDWL 503
>ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis]
gi|223547811|gb|EEF49303.1| DNA cross-link repair protein
pso2/snm1, putative [Ricinus communis]
Length = 493
Score = 546 bits (1408), Expect = e-153
Identities = 264/440 (60%), Positives = 326/440 (74%), Gaps = 7/440 (1%)
Frame = +2
Query: 284 KENDTQSFASDFYNSGTDCSSLLFVDNMEEIKNPESXXXXXXXXXXXXXXWGLSPQS--- 454
+E + +SFA+DFY G+D SSLL N E WGL +
Sbjct: 56 EEEEEESFAADFYRCGSDWSSLLLDRGDTNNNNIEKKLKQANLLDV----WGLKNNNPKP 111
Query: 455 ----LLSDKPNMHPQEEKNSGSIEGAMXXXXXXXXXXHRSHVCPFYKKMPGTPFTVDAFR 622
L S P+ + + S S + VCPFYKK+PGTPFTVDAFR
Sbjct: 112 KALPLTSSSPSPFKKLKIGSSSSSSIKPNYKNLIPKSIKPRVCPFYKKIPGTPFTVDAFR 171
Query: 623 YGKVQDCAAYFLSHFHADHYGGLTKKWSHGPIYATALTARLVKMCLYVDPFYIHPLEFGK 802
YG +Q+C+AYFL+HFHADHYGGLTK WSHGPIY T LTARL+K+CLYV+ +IHPL+
Sbjct: 172 YGPIQNCSAYFLTHFHADHYGGLTKGWSHGPIYCTQLTARLLKLCLYVNSSFIHPLDLNT 231
Query: 803 EYVIEGVRVTMLEANHCPGAALIHFLLPNGACYLHTGDFRASKSLQSYPILLNHRVNVLY 982
EY IEGVRVT+LEANHCPGAAL+HF L NG CYLHTGDFRASK +QSY +L+N +VN LY
Sbjct: 232 EYAIEGVRVTLLEANHCPGAALLHFRLSNGLCYLHTGDFRASKVMQSYHLLVNQKVNALY 291
Query: 983 LDTTYCNPKYRFPPKEEVLKFAVRVVRNHLKNHPKTLIIVGAYSIGKECVYLEISKALGV 1162
LDTTYCNPKY+FP KE+VL + VRV ++ LK P+TLI+VGAYSIGKECVYL ISKALGV
Sbjct: 292 LDTTYCNPKYKFPSKEDVLNYVVRVTKDFLKQQPETLIVVGAYSIGKECVYLSISKALGV 351
Query: 1163 KIHATASRRRILQSYGWPQISDNLCTNGRETPLHILPISSLKDEHLQSYLLSFKSQFSTV 1342
KI+A+ASRR+IL+S+GW +S +LCT ++TPLH+LPISSL+ E L+ YL + +Q+ V
Sbjct: 352 KIYASASRRQILESFGWSDLSRSLCTQPKDTPLHVLPISSLRVETLKDYLKKYINQYRAV 411
Query: 1343 LAFRPTGWTFSETIGHNLDLIKPRTNGSITIYGVPYSEHSSFDELQEFVKFLRPEKIIPT 1522
LAFRPTGWT+SE +G LDLI+P + G++TIYGVPYSEHSSF EL+EFV+FL+P+KIIPT
Sbjct: 412 LAFRPTGWTYSENVGKKLDLIRPISKGNVTIYGVPYSEHSSFTELKEFVEFLKPDKIIPT 471
Query: 1523 VNVGSAVNRDKMQSYFRQWL 1582
VNVG+ NR+KMQS+FR+WL
Sbjct: 472 VNVGNPTNREKMQSHFREWL 491
>ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
gi|87241310|gb|ABD33168.1| DNA repair
metallo-beta-lactamase [Medicago truncatula]
gi|355499554|gb|AES80757.1| DNA cross-link repair protein
SNM1 [Medicago truncatula]
Length = 511
Score = 540 bits (1392), Expect = e-151
Identities = 266/450 (59%), Positives = 326/450 (72%), Gaps = 19/450 (4%)
Frame = +2
Query: 290 NDTQSFASDFYNSGTDCSSLLFVD-------------NMEEI----KNPESXXXXXXXXX 418
++ SFA+DFY G+DCSSLL + N+ +I +N E
Sbjct: 60 SEKSSFAADFYRCGSDCSSLLTPERDSLSSGKKLKQANLFQIWGFKRNVEFESPNQGGYC 119
Query: 419 XXXXXWGLSPQSLLSDKPNMHPQEEKNSGSIEGAMXXXXXXXXXXHR--SHVCPFYKKMP 592
+S + + N +E + + + CPFYKKMP
Sbjct: 120 DVVGEGSVSSEKKSVKRGNWGSILRDTGKVVENSKSTGKRKSFHGEKRVTRSCPFYKKMP 179
Query: 593 GTPFTVDAFRYGKVQDCAAYFLSHFHADHYGGLTKKWSHGPIYATALTARLVKMCLYVDP 772
GT FTVDAFRYG V++C+AYFLSHFHADHYGGL+KKWSHGPIY + LT RLV+MCLYV+P
Sbjct: 180 GTNFTVDAFRYGCVEECSAYFLSHFHADHYGGLSKKWSHGPIYCSPLTGRLVQMCLYVNP 239
Query: 773 FYIHPLEFGKEYVIEGVRVTMLEANHCPGAALIHFLLPNGACYLHTGDFRASKSLQSYPI 952
YI PLEF EYVI+G++VT+++ANHCPGAALIHF LPNG CYLHTGDFRA K +Q Y +
Sbjct: 240 SYICPLEFDTEYVIDGIKVTLIDANHCPGAALIHFELPNGQCYLHTGDFRACKLMQDYHL 299
Query: 953 LLNHRVNVLYLDTTYCNPKYRFPPKEEVLKFAVRVVRNHLKNHPKTLIIVGAYSIGKECV 1132
+N RVNVLYLDTTYCNPKY+FP K++VL + V++ NHLK +P+TL++VGAYSIGKECV
Sbjct: 300 FVNKRVNVLYLDTTYCNPKYKFPSKDDVLNYVVKITNNHLKKYPRTLVVVGAYSIGKECV 359
Query: 1133 YLEISKALGVKIHATASRRRILQSYGWPQISDNLCTNGRETPLHILPISSLKDEHLQSYL 1312
YL ISKALGVKIH ASRRRIL +Y P SD LCTNG T LH+LP+SSL+ E L+ YL
Sbjct: 360 YLAISKALGVKIHVNASRRRILLAYDCPDYSDRLCTNGNNTLLHVLPMSSLRIETLKEYL 419
Query: 1313 LSFKSQFSTVLAFRPTGWTFSETIGHNLDLIKPRTNGSITIYGVPYSEHSSFDELQEFVK 1492
++K QF++VLAFRPTGWTFSE IG++L LIKP +NG+IT YGVPYSEHSSF EL++FV+
Sbjct: 420 KTYKEQFTSVLAFRPTGWTFSEKIGNDLALIKPVSNGNITTYGVPYSEHSSFTELRDFVQ 479
Query: 1493 FLRPEKIIPTVNVGSAVNRDKMQSYFRQWL 1582
FLRP+KIIPTVNVG+A NR+KMQSYFR WL
Sbjct: 480 FLRPDKIIPTVNVGNAANREKMQSYFRDWL 509
>gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japonica Group]
Length = 517
Score = 517 bits (1332), Expect = e-144
Identities = 259/446 (58%), Positives = 316/446 (70%), Gaps = 19/446 (4%)
Frame = +2
Query: 302 SFASDFYNSGTDCSSLLFVDNM--EEIKNPESXXXXXXXXXXXXXXWGLSPQSLLSDKP- 472
SFA DFY SGTD SSLL + ++ ++ WG+ + ++
Sbjct: 42 SFADDFYRSGTDWSSLLAAPSPPPSSEESGKNKSGDSLVQRSLFQAWGIDRRPRREEEVA 101
Query: 473 ----------------NMHPQEEKNSGSIEGAMXXXXXXXXXXHRSHVCPFYKKMPGTPF 604
+ ++ + G +E A + CPFYKK+PGTPF
Sbjct: 102 GVAGGAGAGASSAPSGSWPGRKRRRGGEVEAAAD---------RKPLACPFYKKIPGTPF 152
Query: 605 TVDAFRYGKVQDCAAYFLSHFHADHYGGLTKKWSHGPIYATALTARLVKMCLYVDPFYIH 784
TVDAFRYG V+ C AYFLSHFH DHYGGLTKKW HGPIY TALTARLVKMCL V+P YI
Sbjct: 153 TVDAFRYGAVEGCNAYFLSHFHHDHYGGLTKKWCHGPIYCTALTARLVKMCLSVNPEYIC 212
Query: 785 PLEFGKEYVIEGVRVTMLEANHCPGAALIHFLLPNGACYLHTGDFRASKSLQSYPILLNH 964
PLE KEYVIEGV VT+LEANHCPGAALIHF L +G YLHTGDFRASKS+Q YP+L
Sbjct: 213 PLELDKEYVIEGVSVTLLEANHCPGAALIHFRLGDGKKYLHTGDFRASKSMQLYPLLQRG 272
Query: 965 RVNVLYLDTTYCNPKYRFPPKEEVLKFAVRVVRNHLKNHPKTLIIVGAYSIGKECVYLEI 1144
++N+LYLDTTYCNPKY+FPPKE+V+ FAVR + +L+ PKTLI+VGAYSIGKE VYL I
Sbjct: 273 QINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEPKTLIVVGAYSIGKENVYLAI 332
Query: 1145 SKALGVKIHATASRRRILQSYGWPQISDNLCTNGRETPLHILPISSLKDEHLQSYLLSFK 1324
SKAL V I+ ASRRRIL ++GW +S +C++ + + LH+LP+SSL+ E+LQ YL + K
Sbjct: 333 SKALQVPIYTDASRRRILHAFGWSDLSKMICSDSQSSSLHVLPLSSLRHENLQKYLETLK 392
Query: 1325 SQFSTVLAFRPTGWTFSETIGHNLDLIKPRTNGSITIYGVPYSEHSSFDELQEFVKFLRP 1504
+F VLAFRPTGWTFSE G+ LDLIKP + G ITIYGVPYSEHSSF EL+EFV FLRP
Sbjct: 393 QRFLAVLAFRPTGWTFSEETGNQLDLIKPSSRGKITIYGVPYSEHSSFSELREFVMFLRP 452
Query: 1505 EKIIPTVNVGSAVNRDKMQSYFRQWL 1582
+K+IPTVNVG+A +RDKMQ++FR+WL
Sbjct: 453 QKVIPTVNVGNAASRDKMQAHFREWL 478
>ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group]
gi|38345210|emb|CAD40784.2| OSJNBb0012E08.8 [Oryza sativa
Japonica Group] gi|113564261|dbj|BAF14604.1| Os04g0401800
[Oryza sativa Japonica Group]
gi|116309317|emb|CAH66404.1| OSIGBa0155K12.7 [Oryza
sativa Indica Group]
Length = 481
Score = 517 bits (1332), Expect = e-144
Identities = 259/446 (58%), Positives = 316/446 (70%), Gaps = 19/446 (4%)
Frame = +2
Query: 302 SFASDFYNSGTDCSSLLFVDNM--EEIKNPESXXXXXXXXXXXXXXWGLSPQSLLSDKP- 472
SFA DFY SGTD SSLL + ++ ++ WG+ + ++
Sbjct: 42 SFADDFYRSGTDWSSLLAAPSPPPSSEESGKNKSGDSLVQRSLFQAWGIDRRPRREEEVA 101
Query: 473 ----------------NMHPQEEKNSGSIEGAMXXXXXXXXXXHRSHVCPFYKKMPGTPF 604
+ ++ + G +E A + CPFYKK+PGTPF
Sbjct: 102 GVAGGAGAGASSAPSGSWPGRKRRRGGEVEAAAD---------RKPLACPFYKKIPGTPF 152
Query: 605 TVDAFRYGKVQDCAAYFLSHFHADHYGGLTKKWSHGPIYATALTARLVKMCLYVDPFYIH 784
TVDAFRYG V+ C AYFLSHFH DHYGGLTKKW HGPIY TALTARLVKMCL V+P YI
Sbjct: 153 TVDAFRYGAVEGCNAYFLSHFHHDHYGGLTKKWCHGPIYCTALTARLVKMCLSVNPEYIC 212
Query: 785 PLEFGKEYVIEGVRVTMLEANHCPGAALIHFLLPNGACYLHTGDFRASKSLQSYPILLNH 964
PLE KEYVIEGV VT+LEANHCPGAALIHF L +G YLHTGDFRASKS+Q YP+L
Sbjct: 213 PLELDKEYVIEGVSVTLLEANHCPGAALIHFRLGDGKKYLHTGDFRASKSMQLYPLLQRG 272
Query: 965 RVNVLYLDTTYCNPKYRFPPKEEVLKFAVRVVRNHLKNHPKTLIIVGAYSIGKECVYLEI 1144
++N+LYLDTTYCNPKY+FPPKE+V+ FAVR + +L+ PKTLI+VGAYSIGKE VYL I
Sbjct: 273 QINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEPKTLIVVGAYSIGKENVYLAI 332
Query: 1145 SKALGVKIHATASRRRILQSYGWPQISDNLCTNGRETPLHILPISSLKDEHLQSYLLSFK 1324
SKAL V I+ ASRRRIL ++GW +S +C++ + + LH+LP+SSL+ E+LQ YL + K
Sbjct: 333 SKALQVPIYTDASRRRILHAFGWSDLSKMICSDSQSSSLHVLPLSSLRHENLQKYLETLK 392
Query: 1325 SQFSTVLAFRPTGWTFSETIGHNLDLIKPRTNGSITIYGVPYSEHSSFDELQEFVKFLRP 1504
+F VLAFRPTGWTFSE G+ LDLIKP + G ITIYGVPYSEHSSF EL+EFV FLRP
Sbjct: 393 QRFLAVLAFRPTGWTFSEETGNQLDLIKPSSRGKITIYGVPYSEHSSFSELREFVMFLRP 452
Query: 1505 EKIIPTVNVGSAVNRDKMQSYFRQWL 1582
+K+IPTVNVG+A +RDKMQ++FR+WL
Sbjct: 453 QKVIPTVNVGNAASRDKMQAHFREWL 478