BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028102
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]              98   3e-23
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]               98   3e-23
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    98   3e-22
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    98   3e-22
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...    95   1e-21

>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score = 97.8 bits (242), Expect(2) = 3e-23
 Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 15/260 (5%)
 Frame = +1

Query: 319  RQSQFEKIRKLVPENNSEWCLVGDFNDIFDVKEKLGGTVTSEASMKMFRDLVKECELLDI 498
            R   +E+I ++      +WC+ GDFNDI    EK GG   S+   K F +++K C+L+++
Sbjct: 76   RSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEM 135

Query: 499  GFVGHPFTGE--------QVLKQLVFG-----LVLPIS*GCMLP--SSYDRGGPLSVVD* 633
               G+ FT          Q      FG        P+S    L    S  R   + ++  
Sbjct: 136  PAHGNGFTWAGRRGDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMSS 195

Query: 634  YGSQH*ERKTEICF*QKKVCKEVITKAWKKEVRGSRWFQVSEKIKNVRVELIEWCKRHNF 813
              S   + + +  F  K+  KE I + W +   G+    V+++++  R  L  W K++N 
Sbjct: 196  QDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTN-ISVADRLRACRKSLSSWKKQNNL 254

Query: 814  NSRIRIEDIQCKLKSAYE*SSFDRDGVVQLEKELNEAWGEEEKFWQQRAKFKHLKEGDGN 993
            NS  +I  ++  L+            V  L+K+L +A+ EEE +W+Q+++ K L+ G+ N
Sbjct: 255  NSLDKINQLEAALEKEQSLVWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSGNRN 314

Query: 994  TKNFHALTMVRRRRNLLLEL 1053
            +K FHA     R+R  + +L
Sbjct: 315  SKYFHAAVKQNRQRKRIEKL 334



 Score = 38.5 bits (88), Expect(2) = 3e-23
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +2

Query: 1034 GTCCLNYFGENFQANADCNPGRTTSFVEH---RVTNDMNNQLTRFISSEEVKRTMFEMPA 1204
            G     YFG  F+++   NP   T +      RV+  MN  L   +S++E+K  +F +  
Sbjct: 349  GEVAAAYFGNLFKSS---NPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKP 405

Query: 1205 DKSPGPDSMTGV 1240
              +PGPD M+ +
Sbjct: 406  ASAPGPDGMSAL 417


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score = 97.8 bits (242), Expect(2) = 3e-23
 Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 15/260 (5%)
 Frame = +1

Query: 319  RQSQFEKIRKLVPENNSEWCLVGDFNDIFDVKEKLGGTVTSEASMKMFRDLVKECELLDI 498
            R   +E+I ++      +WC+ GDFNDI    EK GG   S+   K F +++K C+L+++
Sbjct: 79   RSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEM 138

Query: 499  GFVGHPFTGE--------QVLKQLVFG-----LVLPIS*GCMLP--SSYDRGGPLSVVD* 633
               G+ FT          Q      FG        P+S    L    S  R   + ++  
Sbjct: 139  PAHGNGFTWAGRRGDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMSS 198

Query: 634  YGSQH*ERKTEICF*QKKVCKEVITKAWKKEVRGSRWFQVSEKIKNVRVELIEWCKRHNF 813
              S   + + +  F  K+  KE I + W +   G+    V+++++  R  L  W K++N 
Sbjct: 199  QDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTN-ISVADRLRACRKSLSSWKKQNNL 257

Query: 814  NSRIRIEDIQCKLKSAYE*SSFDRDGVVQLEKELNEAWGEEEKFWQQRAKFKHLKEGDGN 993
            NS  +I  ++  L+            V  L+K+L +A+ EEE +W+Q+++ K L+ G+ N
Sbjct: 258  NSLDKINQLEAALEKEQSLVWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSGNRN 317

Query: 994  TKNFHALTMVRRRRNLLLEL 1053
            +K FHA     R+R  + +L
Sbjct: 318  SKYFHAAVKQNRQRKRIEKL 337



 Score = 38.5 bits (88), Expect(2) = 3e-23
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +2

Query: 1034 GTCCLNYFGENFQANADCNPGRTTSFVEH---RVTNDMNNQLTRFISSEEVKRTMFEMPA 1204
            G     YFG  F+++   NP   T +      RV+  MN  L   +S++E+K  +F +  
Sbjct: 352  GEVAAAYFGNLFKSS---NPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKP 408

Query: 1205 DKSPGPDSMTGV 1240
              +PGPD M+ +
Sbjct: 409  ASAPGPDGMSAL 420


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 98.2 bits (243), Expect(2) = 3e-22
 Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 21/266 (7%)
 Frame = +1

Query: 319  RQSQFEKIRKLVPENNSEWCLVGDFNDIFDVKEKLGGTVTSEASMKMFRDLVKECELLDI 498
            R S +     L    N  W L+GDFN+I    EK+GG    E + + FR++V  C+L DI
Sbjct: 494  RHSLWTHFENLSKTRNDPWILIGDFNEILSNNEKIGGPQRDEWTFRGFRNMVSTCDLKDI 553

Query: 499  GFVGHPFT--GEQ---VLKQLVFGLVLPIS*GCMLPSSYDRGGPLSVVD*YGSQH*E--- 654
              +G  F+  GE+    +K  +    +      + P +      L  ++  GS H     
Sbjct: 554  RSIGDRFSWVGERHSHTVKCCLDRAFINSEGAFLFPFA-----ELEFLEFTGSDHKPLFL 608

Query: 655  -------RKTEICF*QKKVC-----KEVITKAWKKEVRGSRWFQVSEKIKNVRVELIEWC 798
                   RK       K++      K  +   W K + G R   + ++++  R  + +  
Sbjct: 609  SLEKTETRKMRPFRFDKRLLEVPHFKTYVKAGWNKAINGQRK-HLPDQVRTCRQAMAKLK 667

Query: 799  KRHNFNSRIRIEDIQCKL-KSAYE*SSFDRDGVVQLEKELNEAWGEEEKFWQQRAKFKHL 975
             + N NSRIRI  +Q  L K+    +  +R  +  +++EL  A+ +EE++WQQ+++ + +
Sbjct: 668  HKSNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQRELTVAYRDEERYWQQKSRNQWM 727

Query: 976  KEGDGNTKNFHALTMVRRRRNLLLEL 1053
            KEGD NT+ FHA T  R   N L+ +
Sbjct: 728  KEGDRNTEFFHACTKTRFSVNRLVTI 753



 Score = 34.7 bits (78), Expect(2) = 3e-22
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +2

Query: 1034 GTCCLNYFGENFQANADCNPGRTTSFVEHR-----VTNDMNNQLTRFISSEEVKRTMFEM 1198
            G     +F + +++N     GR  S ++       VT  +N+ LT+ +S  E+   +  +
Sbjct: 768  GVHAQEFFTKVYESN-----GRPVSIIDFAGFKPIVTEQINDDLTKDLSDLEIYNAICHI 822

Query: 1199 PADKSPGPDSMT 1234
              DK+PGPD +T
Sbjct: 823  GDDKAPGPDGLT 834


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 98.2 bits (243), Expect(2) = 3e-22
 Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 21/266 (7%)
 Frame = +1

Query: 319  RQSQFEKIRKLVPENNSEWCLVGDFNDIFDVKEKLGGTVTSEASMKMFRDLVKECELLDI 498
            R S +     L    N  W L+GDFN+I    EK+GG    E + + FR++V  C+L DI
Sbjct: 474  RHSLWTHFENLSKTRNDPWILIGDFNEILSNNEKIGGPQRDEWTFRGFRNMVSTCDLKDI 533

Query: 499  GFVGHPFT--GEQ---VLKQLVFGLVLPIS*GCMLPSSYDRGGPLSVVD*YGSQH*E--- 654
              +G  F+  GE+    +K  +    +      + P +      L  ++  GS H     
Sbjct: 534  RSIGDRFSWVGERHSHTVKCCLDRAFINSEGAFLFPFA-----ELEFLEFTGSDHKPLFL 588

Query: 655  -------RKTEICF*QKKVC-----KEVITKAWKKEVRGSRWFQVSEKIKNVRVELIEWC 798
                   RK       K++      K  +   W K + G R   + ++++  R  + +  
Sbjct: 589  SLEKTETRKMRPFRFDKRLLEVPHFKTYVKAGWNKAINGQRK-HLPDQVRTCRQAMAKLK 647

Query: 799  KRHNFNSRIRIEDIQCKL-KSAYE*SSFDRDGVVQLEKELNEAWGEEEKFWQQRAKFKHL 975
             + N NSRIRI  +Q  L K+    +  +R  +  +++EL  A+ +EE++WQQ+++ + +
Sbjct: 648  HKSNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQRELTVAYRDEERYWQQKSRNQWM 707

Query: 976  KEGDGNTKNFHALTMVRRRRNLLLEL 1053
            KEGD NT+ FHA T  R   N L+ +
Sbjct: 708  KEGDRNTEFFHACTKTRFSVNRLVTI 733



 Score = 34.7 bits (78), Expect(2) = 3e-22
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +2

Query: 1034 GTCCLNYFGENFQANADCNPGRTTSFVEHR-----VTNDMNNQLTRFISSEEVKRTMFEM 1198
            G     +F + +++N     GR  S ++       VT  +N+ LT+ +S  E+   +  +
Sbjct: 748  GVHAQEFFTKVYESN-----GRPVSIIDFAGFKPIVTEQINDDLTKDLSDLEIYNAICHI 802

Query: 1199 PADKSPGPDSMT 1234
              DK+PGPD +T
Sbjct: 803  GDDKAPGPDGLT 814


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score = 95.1 bits (235), Expect(2) = 1e-21
 Identities = 76/272 (27%), Positives = 122/272 (44%), Gaps = 27/272 (9%)
 Frame = +1

Query: 319  RQSQFEKIRKLVPENNSEWCLVGDFNDIFDVKEKLGGTVTSEASMKMFRDLVKECELLDI 498
            R   +  +R++   +   W ++GDFN+     E       SE+ M+ FR+++ EC+L DI
Sbjct: 94   RHLMWSLLRRIRSNSGDPWLMIGDFNEAMWQTEHKSHRKRSESQMRDFREVLSECDLHDI 153

Query: 499  GFVGHPFT-------GEQVLKQLVFGLVLPIS*GCMLPSSYDRGGPLSVVD*Y---GSQH 648
            GF G P+T       G  V  +L  G+  P         ++    P +V+       S H
Sbjct: 154  GFQGAPWTFCNMQREGRNVKVRLDRGVASP---------AWSSRFPQAVITHLTTPSSDH 204

Query: 649  *----ERKTEICF*QKKVCK------------EVITKAWKKEVRGSRWFQVSEKIKNVRV 780
                 ER+        K+ +            EVI +AW      S    +++K+K    
Sbjct: 205  APLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMT 264

Query: 781  ELIEWCKRHNFNSRIRIEDIQCKLKSAYE*SSFDRDGVVQ-LEKELNEAWGEEEKFWQQR 957
            +L+ W K    N R +I+D++ KL         D D  V  ++KEL E    EE +W+QR
Sbjct: 265  KLVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQR 324

Query: 958  AKFKHLKEGDGNTKNFHALTMVRRRRNLLLEL 1053
            ++   LKEGD NT+ FH     R ++N + +L
Sbjct: 325  SRITWLKEGDLNTRYFHLKASWRAKKNKIKKL 356



 Score = 35.4 bits (80), Expect(2) = 1e-21
 Identities = 14/59 (23%), Positives = 32/59 (54%)
 Frame = +2

Query: 1049 NYFGENFQANADCNPGRTTSFVEHRVTNDMNNQLTRFISSEEVKRTMFEMPADKSPGPD 1225
            ++F + +  + + NP    +    +++  MN  L +  ++EE+   +F++   K+PGPD
Sbjct: 376  SFFQQLYTKDDNLNPVNLLNMFHEKISEQMNADLIKPFTNEEISDALFQIGPLKAPGPD 434