BLASTX nr result

ID: Lithospermum22_contig00028047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00028047
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29630.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_003633412.1| PREDICTED: ZF-HD homeobox protein At4g24660 ...    93   3e-17
gb|ABY61024.1| zinc finger-homeodomain protein 2 [Saruma henryi]       77   2e-12
ref|XP_002328807.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002525870.1| transcription factor, putative [Ricinus comm...    70   2e-10

>emb|CBI29630.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 11/92 (11%)
 Frame = +2

Query: 44  MELPSQEGEMPIPISSAYVQGG---------HMIHQDPSSQNDGHILPSNGPILPSS--P 190
           MEL SQEGE+PIPI+SAY  GG         HMIH DP+  N  HI+ S+ P +PS+  P
Sbjct: 1   MELTSQEGEIPIPINSAYGGGGGHGHGHGHGHMIHHDPAPHN--HIIHSSAPQIPSNGPP 58

Query: 191 LPHQNDLNVPFKKVFVRYRECLKNHAASMGGN 286
           +P   + +VP+KK  VRYRECLKNHAA+MGGN
Sbjct: 59  IPSTLEDHVPYKKA-VRYRECLKNHAAAMGGN 89


>ref|XP_003633412.1| PREDICTED: ZF-HD homeobox protein At4g24660 [Vitis vinifera]
          Length = 281

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 11/92 (11%)
 Frame = +2

Query: 44  MELPSQEGEMPIPISSAYVQGG---------HMIHQDPSSQNDGHILPSNGPILPSS--P 190
           MEL SQEGE+PIPI+SAY  GG         HMIH DP+  N  HI+ S+ P +PS+  P
Sbjct: 1   MELTSQEGEIPIPINSAYGGGGGHGHGHGHGHMIHHDPAPHN--HIIHSSAPQIPSNGPP 58

Query: 191 LPHQNDLNVPFKKVFVRYRECLKNHAASMGGN 286
           +P   + +VP+KK  VRYRECLKNHAA+MGGN
Sbjct: 59  IPSTLEDHVPYKKA-VRYRECLKNHAAAMGGN 89


>gb|ABY61024.1| zinc finger-homeodomain protein 2 [Saruma henryi]
          Length = 258

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = +2

Query: 56  SQEGEMPIPISSAYVQGGHMIHQDPSSQNDGHILPSNGPILPSS-PLPHQNDLNVPFKKV 232
           + EG++P+PI+S+Y    HMIH  P      HI+PS  P LPS+ PL      ++P+KKV
Sbjct: 6   ADEGDIPLPITSSYGHHIHMIHDPPPHT---HIIPSTAPPLPSNGPLED----HLPYKKV 58

Query: 233 FVRYRECLKNHAASMGGN 286
            VRYRECLKNHAASMGGN
Sbjct: 59  -VRYRECLKNHAASMGGN 75


>ref|XP_002328807.1| predicted protein [Populus trichocarpa] gi|222839105|gb|EEE77456.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 13/94 (13%)
 Frame = +2

Query: 44  MELPSQEGEMPIPISSAYVQG-----GHMIHQDPSS--QNDGHILPSNGPILPSS----- 187
           MEL S E  +PIP++S +        GH+IH D  +   N  +I+ S  P +PSS     
Sbjct: 1   MELSSHEAGIPIPLNSTFGGAHGHGHGHLIHHDHPAVPHNHNNIISSTAPQIPSSNNGTS 60

Query: 188 -PLPHQNDLNVPFKKVFVRYRECLKNHAASMGGN 286
                 +D +VP+KK+ VRYRECLKNHAASMGGN
Sbjct: 61  ITTASIDDNHVPYKKM-VRYRECLKNHAASMGGN 93


>ref|XP_002525870.1| transcription factor, putative [Ricinus communis]
           gi|223534875|gb|EEF36564.1| transcription factor,
           putative [Ricinus communis]
          Length = 311

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 47/104 (45%), Positives = 57/104 (54%), Gaps = 23/104 (22%)
 Frame = +2

Query: 44  MELPSQEGEMPIPISSAYVQG----------GHMIHQDP-SSQNDGHILPSNGPILPS-- 184
           MEL S E E+PIP++S Y  G          GHMIH D  +S    HI+PS+ P L S  
Sbjct: 1   MELSSHEVEIPIPLNSTYGGGHGHAHGGHGHGHMIHHDHHNSTPHNHIIPSSAPQLTSNN 60

Query: 185 --SPLP--------HQNDLNVPFKKVFVRYRECLKNHAASMGGN 286
             S LP        H       FKK+ V+Y+ECLKNHAA+MGGN
Sbjct: 61  GPSSLPNTGLDDHHHVTSTTSTFKKM-VKYKECLKNHAAAMGGN 103


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