BLASTX nr result

ID: Lithospermum22_contig00027924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027924
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein lig...    92   3e-17
emb|CBI30594.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|XP_002509447.1| ring finger protein, putative [Ricinus commu...    86   2e-15
ref|XP_003539938.1| PREDICTED: putative E3 ubiquitin-protein lig...    86   3e-15
ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15

>ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
           vinifera]
          Length = 534

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/93 (48%), Positives = 69/93 (74%), Gaps = 3/93 (3%)
 Frame = -3

Query: 311 IPSLQRPYLCCKPTLSVKHLCQYVAMQTSMQPQEIEMLLVKDIEMNTLGESQPLAIDPIK 132
           IPSLQ PYLCC+PTLSV+HLCQYVA+QT +   E+E+L++K+ +++ L  S   + DP  
Sbjct: 440 IPSLQTPYLCCRPTLSVRHLCQYVALQTPLLADEVEILVIKE-QLSKLNPSNSSSPDPCS 498

Query: 131 NELCLVEEHQSLAVIQSMSSFN---MVLAYRRK 42
           + L ++E  ++LAV+++M + N   ++LAYRRK
Sbjct: 499 DRLQVLEAQETLAVLKTMRNANQSHLLLAYRRK 531


>emb|CBI30594.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/93 (48%), Positives = 69/93 (74%), Gaps = 3/93 (3%)
 Frame = -3

Query: 311 IPSLQRPYLCCKPTLSVKHLCQYVAMQTSMQPQEIEMLLVKDIEMNTLGESQPLAIDPIK 132
           IPSLQ PYLCC+PTLSV+HLCQYVA+QT +   E+E+L++K+ +++ L  S   + DP  
Sbjct: 339 IPSLQTPYLCCRPTLSVRHLCQYVALQTPLLADEVEILVIKE-QLSKLNPSNSSSPDPCS 397

Query: 131 NELCLVEEHQSLAVIQSMSSFN---MVLAYRRK 42
           + L ++E  ++LAV+++M + N   ++LAYRRK
Sbjct: 398 DRLQVLEAQETLAVLKTMRNANQSHLLLAYRRK 430


>ref|XP_002509447.1| ring finger protein, putative [Ricinus communis]
           gi|223549346|gb|EEF50834.1| ring finger protein,
           putative [Ricinus communis]
          Length = 418

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/99 (44%), Positives = 72/99 (72%), Gaps = 9/99 (9%)
 Frame = -3

Query: 311 IPSLQRPYLCCKPTLSVKHLCQYVAMQTSMQPQEIEMLLVKDIE-------MNTLGESQP 153
           IPSLQRPYLCC+PTLSVKHL QYVA+QT++Q +EIE+ LVK++          ++  S+P
Sbjct: 314 IPSLQRPYLCCRPTLSVKHLRQYVALQTALQTEEIEIYLVKELNSKFNSLPSTSISISKP 373

Query: 152 LAIDPIKNELCLVEEHQSLAVIQ--SMSSFNMVLAYRRK 42
             IDP K++L ++EE +++  ++  + +  +++LAY+++
Sbjct: 374 GIIDPRKDKLQVLEEQETVGGLKTNNFTQGHVLLAYQKR 412


>ref|XP_003539938.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Glycine max]
          Length = 433

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/102 (47%), Positives = 66/102 (64%), Gaps = 13/102 (12%)
 Frame = -3

Query: 308 PSLQRPYLCCKPTLSVKHLCQYVAMQTSMQPQEIEMLLVKDI----------EMNTLGES 159
           PSLQ+P+LCC+PTLSVKHLC+YVA QT +  +E+E+L VK            E ++  E 
Sbjct: 331 PSLQQPHLCCRPTLSVKHLCEYVAHQTPLPVEEVEILAVKGCCSTVCDKSFDETSSSDEL 390

Query: 158 QPLAIDPIKNELCLVEEHQSLAVIQS---MSSFNMVLAYRRK 42
             L IDP K+EL  ++ H+SLA I+S       +++LAYRRK
Sbjct: 391 TTLVIDPSKDELETLQGHESLAGIKSKCISKREHLILAYRRK 432


>ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|222848746|gb|EEE86293.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/100 (46%), Positives = 70/100 (70%), Gaps = 10/100 (10%)
 Frame = -3

Query: 311 IPSLQRPYLCCKPTLSVKHLCQYVAMQTSMQPQEIEMLLVKD--------IEMNTLGESQ 156
           +PSLQRPYLCC+PTLS+  LCQYVA QTS+Q  E+E+ LV++        I M+T   S+
Sbjct: 364 VPSLQRPYLCCRPTLSINKLCQYVAFQTSLQANEVEIYLVREMNSKVDFSISMST-PISK 422

Query: 155 PLAIDPIKNELCLVEEHQSLAVIQSMSSFN--MVLAYRRK 42
           P  IDP K++L ++EE ++L  +++ +  +  ++LAYR+K
Sbjct: 423 PGIIDPCKDKLQVLEEQETLGRLKTNNFIHGYLLLAYRKK 462


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