BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027908
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   526   e-147
dbj|BAF03493.1| Ku70 homolog [Populus nigra]                          521   e-145
ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|2...   510   e-142
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...   507   e-141
ref|XP_004161593.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   506   e-141

>ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Vitis vinifera]
            gi|296089629|emb|CBI39448.3| unnamed protein product
            [Vitis vinifera]
          Length = 623

 Score =  526 bits (1356), Expect = e-147
 Identities = 255/351 (72%), Positives = 304/351 (86%), Gaps = 2/351 (0%)
 Frame = +2

Query: 5    GISIEVDTYALIRPTNPGSITWLDSLTNLPLKIERSFICADTGALVEETPKKFQTYKNEN 184
            G+SIE++TYALIRPT PG+ITWLDS+TNLPLK ERSFICADTGALV+ T K+F  YKN+N
Sbjct: 274  GLSIELNTYALIRPTVPGTITWLDSITNLPLKTERSFICADTGALVQPT-KRFHPYKNKN 332

Query: 185  VMFSEGEISEIKRVSTGQLRLMGFKPLSCLRDYYNLKPSTFIFPSDEEVIGSTCAFIALH 364
            V F+  E+SE+KR+STG LRL+GFKPLSCL+DY+NL+PSTF+FP+D+EV+GSTC FIALH
Sbjct: 333  VKFTTEELSEVKRISTGHLRLLGFKPLSCLKDYHNLRPSTFVFPTDKEVVGSTCIFIALH 392

Query: 365  RSMLRMKRFAVAFYGDSSHPQLVALVAQDEIISSSGQVEPPGMHMIYLPFADDVRDIEEI 544
            RSMLR+KRFAVAFYG S+HPQLVALVAQDEII+   QVEPPGMHMIYLP++DD+R IEE+
Sbjct: 393  RSMLRLKRFAVAFYGGSAHPQLVALVAQDEIIAGGVQVEPPGMHMIYLPYSDDIRHIEEL 452

Query: 545  NTDEDVP--RAIDEQVMNASALVKRVDLKDFSVCQFANPALQRHYAILQALALDEDEMPD 718
            ++D  VP  RA D+Q+  A+AL++R+DLKDFSVCQFANPALQRHYA+LQALAL+EDEMP+
Sbjct: 453  HSDITVPTPRATDDQIKKATALMRRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPE 512

Query: 719  IKDETVPDEEGMSRPGIVKALEDFKLSVFGGNYEEDMAADEKITDGSKKRKAITDVVKKA 898
            IKDET+PDEEGM+RPG+V ALE+FK SV+G NY E+     K +D SKKRKA+ +   K 
Sbjct: 513  IKDETLPDEEGMARPGVVNALEEFKKSVYGENYNEEDEGHGKASDASKKRKAVAENAVKE 572

Query: 899  YANYDWLDLADNGRLKDLTVVELKYYLTAHNLPLTGTKSILISRILTHMGK 1051
             A YDW DLADNGRLKDLT VELKYYLTAHNL + G K +LISRILTHMGK
Sbjct: 573  SAKYDWADLADNGRLKDLTTVELKYYLTAHNLAVGGKKEVLISRILTHMGK 623


>dbj|BAF03493.1| Ku70 homolog [Populus nigra]
          Length = 627

 Score =  521 bits (1341), Expect = e-145
 Identities = 254/353 (71%), Positives = 304/353 (86%), Gaps = 3/353 (0%)
 Frame = +2

Query: 2    DGISIEVDTYALIRPTNPGSITWLDSLTNLPLKIERSFICADTGALVEETPKKFQTYKNE 181
            +G+SIE++TYALIRPT PG+ITWLDS+TN PLK ERSFICADTGAL++E  K++Q YKN+
Sbjct: 275  NGLSIELNTYALIRPTLPGAITWLDSVTNRPLKTERSFICADTGALMQEPAKRYQPYKND 334

Query: 182  NVMFSEGEISEIKRVSTGQLRLMGFKPLSCLRDYYNLKPSTFIFPSDEEVIGSTCAFIAL 361
            N+M S  E+SEIKRVS G L L+GFKPLSCL+DY+NL+PSTFIFPSD+EVIGSTC FIAL
Sbjct: 335  NIMLSVEELSEIKRVSMGHLHLLGFKPLSCLKDYHNLRPSTFIFPSDKEVIGSTCIFIAL 394

Query: 362  HRSMLRMKRFAVAFYGDSSHPQLVALVAQDEIISSSGQVEPPGMHMIYLPFADDVRDIEE 541
             RSM+ +KRFAVAFYG SS PQLVALVAQDEIIS+ GQVEPPGMHMIYLP++DDVR +EE
Sbjct: 395  LRSMVNLKRFAVAFYGSSSRPQLVALVAQDEIISAGGQVEPPGMHMIYLPYSDDVRHVEE 454

Query: 542  INTDED--VPRAIDEQVMNASALVKRVDLKDFSVCQFANPALQRHYAILQALALDEDEMP 715
            I++D +   PRA DEQ+  A+AL+KR+DLKDFSV QFANP LQRHYA+LQALALDED+MP
Sbjct: 455  IHSDTNAGAPRATDEQIKKAAALIKRIDLKDFSVFQFANPGLQRHYAVLQALALDEDDMP 514

Query: 716  DIKDETVPDEEGMSRPGIVKALEDFKLSVFGGNYEEDM-AADEKITDGSKKRKAITDVVK 892
            +I DET+PDEEGM+RPG+VKA+E+FKLSV+G NY+E+    + K +D SKKRK   +   
Sbjct: 515  EINDETLPDEEGMARPGVVKAVEEFKLSVYGENYDEESDMGNGKASDASKKRKTAVENAA 574

Query: 893  KAYANYDWLDLADNGRLKDLTVVELKYYLTAHNLPLTGTKSILISRILTHMGK 1051
            K  ANY+W DLADNG+LKDLTV ELKYYLTAHNLP+TG K +LISRILTH+GK
Sbjct: 575  KESANYNWPDLADNGQLKDLTVTELKYYLTAHNLPVTGKKEVLISRILTHLGK 627


>ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|222860512|gb|EEE98059.1|
            predicted protein [Populus trichocarpa]
          Length = 628

 Score =  510 bits (1314), Expect = e-142
 Identities = 251/354 (70%), Positives = 303/354 (85%), Gaps = 4/354 (1%)
 Frame = +2

Query: 2    DGISIEVDTYALIRPTNPGSITWLDSLTNLPLKIERSFICADTGALVEETPKKFQTYKNE 181
            +G+SIE++TYALIRPT PG+ITWLDS++N PLK ERSFICADTGAL++E  K++Q YKN+
Sbjct: 275  NGLSIELNTYALIRPTLPGAITWLDSVSNRPLKTERSFICADTGALMQEPAKRYQPYKND 334

Query: 182  NVMFSEGEISEIKRVSTGQLRLMGFKPLSCLRDYYNLKPSTFIFPSDEEVIGSTCAFIAL 361
            N+M S  E+SEIKRVSTG L L+GFKPLSCL+DY+NL+PSTFIFPSD+EVIGSTC FIAL
Sbjct: 335  NIMLSVEELSEIKRVSTGHLHLLGFKPLSCLKDYHNLRPSTFIFPSDKEVIGSTCIFIAL 394

Query: 362  HRSMLRMKRFAVAFYGDSSHPQLVALVAQDEIISSSGQVEPPGMHMIYLPFADD-VRDIE 538
             RSM+ +KRFAVAFYG SS PQLVALVAQDEIIS+ GQVEPPGMHMIYLP++DD + D+ 
Sbjct: 395  LRSMVNLKRFAVAFYGSSSRPQLVALVAQDEIISAGGQVEPPGMHMIYLPYSDDGMVDLL 454

Query: 539  EINTDED--VPRAIDEQVMNASALVKRVDLKDFSVCQFANPALQRHYAILQALALDEDEM 712
            +I++D +   PRA DEQ+  A+AL+KR+DLKDFSV QFANP LQRHYA+LQALALDED+M
Sbjct: 455  QIHSDTNAGAPRATDEQIKKAAALIKRIDLKDFSVFQFANPGLQRHYAVLQALALDEDDM 514

Query: 713  PDIKDETVPDEEGMSRPGIVKALEDFKLSVFGGNYEEDM-AADEKITDGSKKRKAITDVV 889
            P+I DET+PDEEGM+RPG+VKA+E+FKLSV+G NY+E+      K +D SKKRK   +  
Sbjct: 515  PEINDETLPDEEGMARPGVVKAVEEFKLSVYGENYDEESDMGSGKASDASKKRKTAAENA 574

Query: 890  KKAYANYDWLDLADNGRLKDLTVVELKYYLTAHNLPLTGTKSILISRILTHMGK 1051
             K  ANY+W DLADNG+LKDLTV ELKYYLTAHNLP+TG K +LISRILTH+GK
Sbjct: 575  AKESANYNWPDLADNGQLKDLTVTELKYYLTAHNLPVTGKKEVLISRILTHLGK 628


>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
            gi|223539210|gb|EEF40803.1| ku P70 DNA helicase, putative
            [Ricinus communis]
          Length = 626

 Score =  507 bits (1306), Expect = e-141
 Identities = 245/352 (69%), Positives = 297/352 (84%), Gaps = 3/352 (0%)
 Frame = +2

Query: 5    GISIEVDTYALIRPTNPGSITWLDSLTNLPLKIERSFICADTGALVEETPKKFQTYKNEN 184
            G+SI+++TYALIRPT PG+ITWLDS+TN PLK ERSFICADTGAL+ E  K    YKNEN
Sbjct: 275  GLSIDLNTYALIRPTTPGAITWLDSVTNRPLKTERSFICADTGALILEPTKLSHPYKNEN 334

Query: 185  VMFSEGEISEIKRVSTGQLRLMGFKPLSCLRDYYNLKPSTFIFPSDEEVIGSTCAFIALH 364
            + FS  E++EIKR+STG LRL+GFKPLSCLRDY+NL+PSTF+FPSD+EVIGST  FIALH
Sbjct: 335  IKFSVEELAEIKRISTGHLRLLGFKPLSCLRDYHNLRPSTFVFPSDKEVIGSTSIFIALH 394

Query: 365  RSMLRMKRFAVAFYGDSSHPQLVALVAQDEIISSSGQVEPPGMHMIYLPFADDVRDIEEI 544
            RSMLR+ RFAVAFYG SSHP+LVALVAQDEI+S+ GQ+EPPGMHMIYLP++DDVR IEE 
Sbjct: 395  RSMLRLNRFAVAFYGGSSHPRLVALVAQDEIVSAGGQIEPPGMHMIYLPYSDDVRHIEEF 454

Query: 545  NTDEDV--PRAIDEQVMNASALVKRVDLKDFSVCQFANPALQRHYAILQALALDEDEMPD 718
            +++ +V  P A  +Q   A+ L+KR+DLKDFSVCQFANPALQRHYA+LQALAL+EDEMP+
Sbjct: 455  HSESNVGLPHANGDQTKKAAGLIKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPE 514

Query: 719  IKDETVPDEEGMSRPGIVKALEDFKLSVFGGNY-EEDMAADEKITDGSKKRKAITDVVKK 895
             KDET+PDEEG++RPG+VKA+E+FKLSV+G  Y EE++  + K  + S+KRKA  +  K 
Sbjct: 515  SKDETLPDEEGLARPGVVKAIEEFKLSVYGDKYDEENLLGNGKANETSRKRKAAAENAKN 574

Query: 896  AYANYDWLDLADNGRLKDLTVVELKYYLTAHNLPLTGTKSILISRILTHMGK 1051
              ANYDW DLADNG+LKDLTV ELK YLTAHN+P+ G K  LIS+ILTH+GK
Sbjct: 575  ESANYDWADLADNGKLKDLTVAELKLYLTAHNIPVAGKKEALISKILTHLGK 626


>ref|XP_004161593.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2 subunit
            KU70-like [Cucumis sativus]
          Length = 625

 Score =  506 bits (1303), Expect = e-141
 Identities = 241/349 (69%), Positives = 302/349 (86%), Gaps = 1/349 (0%)
 Frame = +2

Query: 8    ISIEVDTYALIRPTNPGSITWLDSLTNLPLKIERSFICADTGALVEETPKKFQTYKNENV 187
            +SI+V++YALIRPT PG+ITWLDS++N PLK ERSFICADTGAL  E  K+FQ YKN+ +
Sbjct: 277  LSIDVNSYALIRPTLPGAITWLDSISNRPLKTERSFICADTGALFLEPSKRFQLYKNQVI 336

Query: 188  MFSEGEISEIKRVSTGQLRLMGFKPLSCLRDYYNLKPSTFIFPSDEEVIGSTCAFIALHR 367
             FS  E+SEIKRVS G L+L+GFKPLSCL+DY+NL+PSTF++PSDE + GSTC FIALHR
Sbjct: 337  KFSGEELSEIKRVSAGHLQLLGFKPLSCLKDYHNLRPSTFLYPSDEGMSGSTCIFIALHR 396

Query: 368  SMLRMKRFAVAFYGDSSHPQLVALVAQDEIISSSGQVEPPGMHMIYLPFADDVRDIEEIN 547
            SM+++ RFAVAF+G  S PQLVALVAQDEII+++GQVEPPGM+M+YLP+ADD+R +EE++
Sbjct: 397  SMVKLNRFAVAFFGSPSRPQLVALVAQDEIITAAGQVEPPGMNMLYLPYADDIRHVEELH 456

Query: 548  TDEDV-PRAIDEQVMNASALVKRVDLKDFSVCQFANPALQRHYAILQALALDEDEMPDIK 724
             + D+ PRA D+QV  A+AL+KR+DLKDFSVCQFANPALQRHYA+LQALAL+EDEMP++ 
Sbjct: 457  PNPDIAPRATDDQVKKAAALMKRIDLKDFSVCQFANPALQRHYAVLQALALEEDEMPEVN 516

Query: 725  DETVPDEEGMSRPGIVKALEDFKLSVFGGNYEEDMAADEKITDGSKKRKAITDVVKKAYA 904
            DETVPDEEGM+RPG+VK LE+FKLSV+G NYEE+ A   K+++ SKKRKAI++   +   
Sbjct: 517  DETVPDEEGMARPGVVKTLEEFKLSVYGENYEEEEAGKGKVSEVSKKRKAISETASQKCK 576

Query: 905  NYDWLDLADNGRLKDLTVVELKYYLTAHNLPLTGTKSILISRILTHMGK 1051
             YDW DLADNG+LK+L+VVELKYYLTAH+LP++G K  LISRIL+HMGK
Sbjct: 577  EYDWADLADNGKLKELSVVELKYYLTAHDLPVSGKKEALISRILSHMGK 625