BLASTX nr result

ID: Lithospermum22_contig00027847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027847
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    69   5e-10
gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]        67   2e-09
gb|AAP46207.1| putative retrotransposon protein [Oryza sativa Ja...    65   6e-09
emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]          65   6e-09
gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]     65   6e-09

>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
 Frame = +3

Query: 30   PSYLSDYICHLARLLHXXXXXXXXXXXXXXX--FLIANFVSYDNFSTKYCSFLANVTSKI 203
            P +L DYIC+ AR L                  + IAN+V+Y  FS  + +FLA +  + 
Sbjct: 746  PRHLQDYICYSARSLSTLCSKASSIQKVPSGKPYPIANYVTYTKFSVGHRAFLAXINIEK 805

Query: 204  EPRSYKEAVKEPCW*KAM*VEIDALEKNRTWDI 302
            EPR+YKEAV +  W +AM  EI+ALE N+TW +
Sbjct: 806  EPRTYKEAVXDNRWREAMAKEIEALETNQTWKV 838


>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/99 (33%), Positives = 55/99 (55%)
 Frame = +3

Query: 6   LEQRTR*PPSYLSDYICHLARLLHXXXXXXXXXXXXXXXFLIANFVSYDNFSTKYCSFLA 185
           +  RT+  PSYL DYIC+ +                   + ++NF+S+ + S    +F  
Sbjct: 39  VSSRTKKSPSYLQDYICNPST------NSVSSANKSCILYPLSNFISHKHLSNSQHTFAL 92

Query: 186 NVTSKIEPRSYKEAVKEPCW*KAM*VEIDALEKNRTWDI 302
           ++ S IEP+SY EA+K  CW +AM +E++AL++  TW +
Sbjct: 93  SLVSHIEPKSYAEAIKSDCWKQAMQLELNALDQTGTWTV 131


>gb|AAP46207.1| putative retrotransposon protein [Oryza sativa Japonica Group]
          Length = 1176

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/58 (50%), Positives = 45/58 (77%)
 Frame = +3

Query: 129 IANFVSYDNFSTKYCSFLANVTSKIEPRSYKEAVKEPCW*KAM*VEIDALEKNRTWDI 302
           IAN+VSY + S+ Y +F+A++ S I P+ +KEA ++P W +AM  E++ALEKN+TWD+
Sbjct: 764 IANYVSYTSLSSTYKAFVASLNSAIIPKDWKEAKQDPRWHQAMLDELEALEKNKTWDL 821


>emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa Japonica Group]
          Length = 1262

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/58 (50%), Positives = 45/58 (77%)
 Frame = +3

Query: 129 IANFVSYDNFSTKYCSFLANVTSKIEPRSYKEAVKEPCW*KAM*VEIDALEKNRTWDI 302
           IAN+VSY + S+ Y +F+A++ S I P+ +KEA ++P W +AM  E++ALEKN+TWD+
Sbjct: 727 IANYVSYTSLSSTYKAFVASLNSAIIPKDWKEAKQDPRWHQAMLDELEALEKNKTWDL 784


>gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]
          Length = 1472

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/58 (50%), Positives = 45/58 (77%)
 Frame = +3

Query: 129  IANFVSYDNFSTKYCSFLANVTSKIEPRSYKEAVKEPCW*KAM*VEIDALEKNRTWDI 302
            IAN+VSY + S+ Y +F+A++ S I P+ +KEA ++P W +AM  E++ALEKN+TWD+
Sbjct: 937  IANYVSYTSLSSTYRAFVASLNSAIIPKDWKEAKQDPRWHQAMLDELEALEKNKTWDL 994


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