BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027828
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADX31265.1| unknown [Triticum aestivum]                             58   1e-17
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]       57   2e-16
gb|ABA95357.2| retrotransposon protein, putative, unclassified [...    57   2e-15
emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]                56   9e-15
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...    57   2e-14

>gb|ADX31265.1| unknown [Triticum aestivum]
          Length = 1231

 Score = 57.8 bits (138), Expect(2) = 1e-17
 Identities = 24/64 (37%), Positives = 42/64 (65%)
 Frame = +3

Query: 3    SYLQDKDLQHIVAGIVINPADFPMHEYRKGILRYKHKIILGNDQELRQKAITTLRDSSIG 182
            SY +DK++Q  +A I ++P     +  + G++RYK +I +G+D  ++Q  +  L DS++G
Sbjct: 1096 SYREDKEIQDKMAQIALDPGSDSDYSLKDGVMRYKGRIWIGSDSMIQQSLVKALHDSAVG 1155

Query: 183  GHSG 194
            GHSG
Sbjct: 1156 GHSG 1159



 Score = 56.6 bits (135), Expect(2) = 1e-17
 Identities = 26/51 (50%), Positives = 32/51 (62%)
 Frame = +1

Query: 181  GATQAYQRLKALSYWKGMKKDVGDYVASCLVCQRSKHELIAFRGLLQPIDI 333
            G    Y R+K L +WKGMK  +  YV  C+ CQR+K E IA  GLLQP+ I
Sbjct: 1159 GFYATYHRIKNLFFWKGMKAQIKQYVKECVTCQRAKTERIAPAGLLQPLPI 1209


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score = 57.4 bits (137), Expect(2) = 2e-16
 Identities = 24/51 (47%), Positives = 34/51 (66%)
 Frame = +1

Query: 181  GATQAYQRLKALSYWKGMKKDVGDYVASCLVCQRSKHELIAFRGLLQPIDI 333
            GA   Y ++K + YW GM+ DV  YV SC VCQ+SK +   + GLLQP+++
Sbjct: 1139 GAPATYHKVKQMFYWPGMRADVLQYVQSCTVCQQSKPDRAKYPGLLQPLEV 1189



 Score = 52.8 bits (125), Expect(2) = 2e-16
 Identities = 22/63 (34%), Positives = 42/63 (66%)
 Frame = +3

Query: 6    YLQDKDLQHIVAGIVINPADFPMHEYRKGILRYKHKIILGNDQELRQKAITTLRDSSIGG 185
            Y +D   + ++A +++N AD       +GI+R+K++I LG + +L+QK +  + D+++GG
Sbjct: 1077 YDKDPTSKQLLAQLILNSADKAPFSLHQGIIRHKNRIWLGGNLQLQQKVLQAMHDTAVGG 1136

Query: 186  HSG 194
            HSG
Sbjct: 1137 HSG 1139


>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2811

 Score = 57.4 bits (137), Expect(2) = 2e-15
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = +1

Query: 181  GATQAYQRLKALSYWKGMKKDVGDYVASCLVCQRSKHELIAFRGLLQPIDI 333
            G    YQR+K L  W GM+KDV ++V  C +CQR+K E + + GLLQP+++
Sbjct: 2359 GILVTYQRVKQLFSWPGMRKDVQEFVQHCDICQRAKSEHVKYPGLLQPLEV 2409



 Score = 49.7 bits (117), Expect(2) = 2e-15
 Identities = 22/64 (34%), Positives = 40/64 (62%)
 Frame = +3

Query: 6    YLQDKDLQHIVAGIVINPADFPMHEYRKGILRYKHKIILGNDQELRQKAITTLRDSSIGG 185
            Y  D + Q ++  + ++ A     E + GIL +KH+I +G+++ L+QK +  L  +++GG
Sbjct: 2297 YQSDSEAQKLLQALSVSGAGPSNFEVQNGILYFKHRIWIGHNKLLQQKILANLHTAAVGG 2356

Query: 186  HSGI 197
            HSGI
Sbjct: 2357 HSGI 2360


>emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
          Length = 1265

 Score = 56.2 bits (134), Expect(2) = 9e-15
 Identities = 23/51 (45%), Positives = 35/51 (68%)
 Frame = +1

Query: 181  GATQAYQRLKALSYWKGMKKDVGDYVASCLVCQRSKHELIAFRGLLQPIDI 333
            G    YQR+K L  W G++KDV ++V  C +CQR+K E + + GLLQP+++
Sbjct: 1145 GILVTYQRVKQLFSWPGLRKDVQEFVQHCDICQRAKSEHVKYPGLLQPLEV 1195



 Score = 48.5 bits (114), Expect(2) = 9e-15
 Identities = 22/64 (34%), Positives = 39/64 (60%)
 Frame = +3

Query: 6    YLQDKDLQHIVAGIVINPADFPMHEYRKGILRYKHKIILGNDQELRQKAITTLRDSSIGG 185
            Y  D + Q ++  + ++ A     E   GIL +KH+I +G+++ L+QK +  L  +++GG
Sbjct: 1083 YQSDSEAQKLLQALSVSGAGPSNFEVLNGILYFKHRIWIGHNKLLQQKILANLHTTAVGG 1142

Query: 186  HSGI 197
            HSGI
Sbjct: 1143 HSGI 1146


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score = 56.6 bits (135), Expect(2) = 2e-14
 Identities = 26/51 (50%), Positives = 32/51 (62%)
 Frame = +1

Query: 181  GATQAYQRLKALSYWKGMKKDVGDYVASCLVCQRSKHELIAFRGLLQPIDI 333
            G    YQR+K L YW GMKK++   V  C VCQRSK E   + GLL+P+ I
Sbjct: 933  GRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLPI 983



 Score = 47.0 bits (110), Expect(2) = 2e-14
 Identities = 23/64 (35%), Positives = 36/64 (56%)
 Frame = +3

Query: 3    SYLQDKDLQHIVAGIVINPADFPMHEYRKGILRYKHKIILGNDQELRQKAITTLRDSSIG 182
            SY  D + + ++  + + P     +    G+LRYK +I +G D ELR   I +L  S++G
Sbjct: 870  SYQNDANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKDPELRLNIIHSLHMSAVG 929

Query: 183  GHSG 194
            GHSG
Sbjct: 930  GHSG 933