BLASTX nr result

ID: Lithospermum22_contig00027769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027769
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ36110.1| hypothetical protein OsJ_20422 [Oryza sativa Japo...    79   4e-13
ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helica...    79   5e-13
emb|CBI16803.3| unnamed protein product [Vitis vinifera]               79   5e-13
dbj|BAD35264.1| putative RNA helicase [Oryza sativa Japonica Gro...    78   6e-13
ref|NP_001057036.1| Os06g0192500 [Oryza sativa Japonica Group] g...    78   6e-13

>gb|EAZ36110.1| hypothetical protein OsJ_20422 [Oryza sativa Japonica Group]
          Length = 518

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/76 (53%), Positives = 51/76 (67%)
 Frame = -1

Query: 229 TNMPSMAPISRTNNTEQHNLFNGEKPIFKNIRQQIEQQRRALPIASARRRLVEEIRKNDT 50
           ++MPS      +   +QHN            RQ I QQR++LPIAS  +RL+EE+RKNDT
Sbjct: 155 SDMPSFPSSGASPQKQQHNARR---------RQLIRQQRKSLPIASVEKRLIEEVRKNDT 205

Query: 49  LIIVGETGSGKTTQLP 2
           LI+VGETGSGKTTQLP
Sbjct: 206 LIVVGETGSGKTTQLP 221


>ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helicase DHX33-like [Vitis
           vinifera]
          Length = 713

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/47 (78%), Positives = 44/47 (93%)
 Frame = -1

Query: 142 NIRQQIEQQRRALPIASARRRLVEEIRKNDTLIIVGETGSGKTTQLP 2
           N +Q++EQQR+ALPIAS  +RLVEE++KNDTLIIVGETGSGKTTQLP
Sbjct: 25  NRKQRLEQQRKALPIASVEKRLVEEVQKNDTLIIVGETGSGKTTQLP 71


>emb|CBI16803.3| unnamed protein product [Vitis vinifera]
          Length = 1408

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/47 (78%), Positives = 44/47 (93%)
 Frame = -1

Query: 142 NIRQQIEQQRRALPIASARRRLVEEIRKNDTLIIVGETGSGKTTQLP 2
           N +Q++EQQR+ALPIAS  +RLVEE++KNDTLIIVGETGSGKTTQLP
Sbjct: 755 NRKQRLEQQRKALPIASVEKRLVEEVQKNDTLIIVGETGSGKTTQLP 801


>dbj|BAD35264.1| putative RNA helicase [Oryza sativa Japonica Group]
           gi|51091123|dbj|BAD35820.1| putative RNA helicase [Oryza
           sativa Japonica Group]
          Length = 698

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 41/74 (55%), Positives = 49/74 (66%)
 Frame = -1

Query: 223 MPSMAPISRTNNTEQHNLFNGEKPIFKNIRQQIEQQRRALPIASARRRLVEEIRKNDTLI 44
           MPS      +   +QHN            RQ I QQR++LPIAS  +RL+EE+RKNDTLI
Sbjct: 1   MPSFPSSGASPQKQQHNARR---------RQLIRQQRKSLPIASVEKRLIEEVRKNDTLI 51

Query: 43  IVGETGSGKTTQLP 2
           +VGETGSGKTTQLP
Sbjct: 52  VVGETGSGKTTQLP 65


>ref|NP_001057036.1| Os06g0192500 [Oryza sativa Japonica Group]
           gi|51090787|dbj|BAD35265.1| RNA helicase-like [Oryza
           sativa Japonica Group] gi|51091124|dbj|BAD35821.1| RNA
           helicase-like [Oryza sativa Japonica Group]
           gi|113595076|dbj|BAF18950.1| Os06g0192500 [Oryza sativa
           Japonica Group]
          Length = 386

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 41/74 (55%), Positives = 49/74 (66%)
 Frame = -1

Query: 223 MPSMAPISRTNNTEQHNLFNGEKPIFKNIRQQIEQQRRALPIASARRRLVEEIRKNDTLI 44
           MPS      +   +QHN            RQ I QQR++LPIAS  +RL+EE+RKNDTLI
Sbjct: 1   MPSFPSSGASPQKQQHNARR---------RQLIRQQRKSLPIASVEKRLIEEVRKNDTLI 51

Query: 43  IVGETGSGKTTQLP 2
           +VGETGSGKTTQLP
Sbjct: 52  VVGETGSGKTTQLP 65


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