BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027760
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]   134   1e-29
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ...    89   5e-16
emb|CBI22375.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15

>ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/114 (55%), Positives = 85/114 (74%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +IQYFC +GK+ E LELL+SMI  G  P++VTFN L+++LCK+ LL TA +IF+  +  G
Sbjct: 401 LIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTG 460

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
             P+  +YNIL+ ASI EGN+ LV+QL R+MYS ++KPD VTYG FI   C+EG
Sbjct: 461 YFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEG 514



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/109 (33%), Positives = 67/109 (61%)
 Frame = +3

Query: 18  CKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFGILPDV 197
           C+  K  E+L LL+SM+ +G +P+ V++NT++N  C+   ++ A ++F H +     PDV
Sbjct: 301 CRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDV 360

Query: 198 ITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
           +++N +L A+  +GN+ ++ ++   M  + VK +VV+  C I  FC  G
Sbjct: 361 VSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIG 409


>emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/114 (55%), Positives = 85/114 (74%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +IQYFC +GK+ E LELL+SMI  G  P++VTFN L+++LCK+ LL TA +IF+  +  G
Sbjct: 509 LIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAHRIFREFRNTG 568

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
             P+  +YNIL+ ASI EGN+ LV+QL R+MYS ++KPD VTYG FI   C+EG
Sbjct: 569 YFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCKEG 622



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/109 (33%), Positives = 67/109 (61%)
 Frame = +3

Query: 18  CKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFGILPDV 197
           C+  K  E+L LL+SM+ +G +P+ V++NT++N  C+   ++ A ++F H +     PDV
Sbjct: 409 CRENKSGEALSLLQSMVEKGLVPTNVSYNTILNGFCRENHIDEALQLFDHFEWANNSPDV 468

Query: 198 ITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
           +++N +L A+  +GN+ ++ ++   M  + VK +VV+  C I  FC  G
Sbjct: 469 VSFNTILSAACKQGNSSMIRRVLYRMEYEGVKLNVVSSTCLIQYFCAIG 517


>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330308|gb|EFH60727.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/106 (40%), Positives = 71/106 (66%)
 Frame = +3

Query: 27  GKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFGILPDVITY 206
           G + E+L+LL  M++RG  P + T+NT+I  +CK  +++ A ++ ++L++ G  PDVI+Y
Sbjct: 238 GGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISY 297

Query: 207 NILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
           NILLRA + +G     ++L  +M+S+K  P+VVTY   I   CR+G
Sbjct: 298 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 343



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/114 (35%), Positives = 62/114 (54%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +I  FC+ G+L  ++E L++MI+ G +P IV +NT++  LCK+   + A +IF  L   G
Sbjct: 370 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 429

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
             P+  +YN +  A    G+      +  EM S  + PD +TY   I   CREG
Sbjct: 430 CSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREG 483



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/114 (35%), Positives = 62/114 (54%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +I  FCK+ ++ ++  +L  M ++   P  VT+N +I  LC    L+ A K+   L    
Sbjct: 160 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDN 219

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
             P VITY IL+ A+++EG      +L  EM S+ +KPD+ TY   I   C+EG
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/106 (30%), Positives = 53/106 (50%)
 Frame = +3

Query: 27  GKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFGILPDVITY 206
           GK +E  +L+  M +    P++VT++ LI  LC+   +E A  + K +K  G+ PD  +Y
Sbjct: 308 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 367

Query: 207 NILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
           + L+ A   EG   +  +    M S    PD+V Y   +   C+ G
Sbjct: 368 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 413



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/114 (28%), Positives = 58/114 (50%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +I+  CK G +  + E+++++  +G  P ++++N L+  L      E  EK+   +    
Sbjct: 265 IIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 324

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
             P+V+TY+IL+     +G       L + M  + + PD  +Y   I AFCREG
Sbjct: 325 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 378



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/114 (26%), Positives = 57/114 (50%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           MI   C  GKL  +L++L  +++    P+++T+  LI        ++ A K+   +   G
Sbjct: 195 MIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG 254

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
           + PD+ TYN ++R    EG      ++ R +  +  +PDV++Y   + A   +G
Sbjct: 255 LKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQG 308


>emb|CBI22375.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/114 (38%), Positives = 66/114 (57%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +I  FCKV +++ + ++L  M  RG +P IVT+N +I  LC  R L  A K+   L +  
Sbjct: 143 VISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDN 202

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
            +P VITY IL+ A+I+EG      +L  EM ++ + PD+ TY   I   C+EG
Sbjct: 203 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 256



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/114 (30%), Positives = 57/114 (50%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +I+  CK G   E  +L+  M +RG  P+ VT++ LI+ LC+   ++ A  + K +    
Sbjct: 248 IIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 307

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
           + PD  +Y+ L+ A   EG   L   +   M S    PD+V Y   + A C+ G
Sbjct: 308 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNG 361



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/80 (33%), Positives = 45/80 (56%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +I   C+ G++ E++ +LK MI +   P   +++ LI+ LCK   L+ A  I  ++   G
Sbjct: 283 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 342

Query: 183 ILPDVITYNILLRASIIEGN 242
            LPD++ YN +L A    GN
Sbjct: 343 CLPDIVNYNTILAALCKNGN 362


>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/114 (38%), Positives = 66/114 (57%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +I  FCKV +++ + ++L  M  RG +P IVT+N +I  LC  R L  A K+   L +  
Sbjct: 143 VISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDN 202

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
            +P VITY IL+ A+I+EG      +L  EM ++ + PD+ TY   I   C+EG
Sbjct: 203 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 256



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/106 (38%), Positives = 66/106 (62%)
 Frame = +3

Query: 27  GKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFGILPDVITY 206
           G + E+++LL+ M+ RG +P + T+N +I  +CK  ++E A ++   L   G  PDVI+Y
Sbjct: 221 GGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISY 280

Query: 207 NILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
           NILLRA + +G     ++L  EM+S+  +P+ VTY   I + CR G
Sbjct: 281 NILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 326



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/114 (33%), Positives = 61/114 (53%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +I   CK G+L  ++ ++  MI+ G +P IV +NT++  LCK+     A +IF  L+  G
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
             P+V +YN ++ A    G+      +   M S+ V PD +TY   I   CR+G
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDG 466



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/109 (29%), Positives = 56/109 (51%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +I   C+ G++ E++ +LK MI +   P   +++ LI+ LCK   L+ A  I  ++   G
Sbjct: 318 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 377

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILA 329
            LPD++ YN +L A    GN     ++  ++      P+V +Y   I A
Sbjct: 378 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 426



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/114 (29%), Positives = 57/114 (50%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +++ F   GK  E  +L+  M +RG  P+ VT++ LI+ LC+   ++ A  + K +    
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
           + PD  +Y+ L+ A   EG   L   +   M S    PD+V Y   + A C+ G
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNG 396



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/114 (25%), Positives = 58/114 (50%)
 Frame = +3

Query: 3   MIQYFCKVGKLQESLELLKSMINRGHIPSIVTFNTLINELCKSRLLETAEKIFKHLKVFG 182
           +I+  CK G ++ + EL+ S+ ++G  P ++++N L+         +  EK+   +   G
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307

Query: 183 ILPDVITYNILLRASIIEGNNFLVDQLSREMYSQKVKPDVVTYGCFILAFCREG 344
             P+ +TY+IL+ +    G       + + M  +++ PD  +Y   I A C+EG
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 361