BLASTX nr result
ID: Lithospermum22_contig00027750
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00027750
(451 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,... 192 2e-47
ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containi... 186 1e-45
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi... 184 5e-45
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera] 184 5e-45
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2... 174 7e-42
>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 730
Score = 192 bits (488), Expect = 2e-47
Identities = 90/148 (60%), Positives = 111/148 (75%)
Frame = -1
Query: 445 LIKEAHVITMASNIFHPLSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLK 266
L+ +AH IT SNI HPL WNLLI +YV+N + EALS Y M +KG+RPDKFTYPSVLK
Sbjct: 143 LLADAHTITENSNILHPLPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLK 202
Query: 265 ACGELSNLEFGAKVHKSIDGNPSAWNLFVQNALISMYAKCGEVGIARGVFEKMIEKDAVS 86
ACGE ++ FG K+H SI+ + WNLFV N+L+SMYAK GE+ AR +FE M+E+D VS
Sbjct: 203 ACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVS 262
Query: 85 WNTMIGGYASNGKWPEAFEVFERMHMNG 2
WNTMI GYAS G W EAFE+F +M + G
Sbjct: 263 WNTMISGYASKGMWKEAFELFGKMRVEG 290
Score = 78.2 bits (191), Expect = 7e-13
Identities = 40/144 (27%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Frame = -1
Query: 442 IKEAHVITMASNIFHPLSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLKA 263
++ A+ + ++ + ++WN ++ Y D EEA ++ M+ G+ P+ T S+L
Sbjct: 381 LRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPL 440
Query: 262 CGELSNLEFGAKVHKSIDGNPSAWN-LFVQNALISMYAKCGEVGIARGVFEKMIEKDAVS 86
C ++NL+ G + H I + L + N+L+ MYA+ G+V A+ +F+ + +D V+
Sbjct: 441 CARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVT 500
Query: 85 WNTMIGGYASNGKWPEAFEVFERM 14
+ ++I GY G+ EA ++F+ M
Sbjct: 501 YTSLIAGYGIQGEGREALKLFDEM 524
Score = 70.5 bits (171), Expect = 1e-10
Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Frame = -1
Query: 394 LSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLKACGELSNLEFGAKVHKS 215
++WN + V++ ++EEAL + S+M + G+ D L AC + ++ G ++H S
Sbjct: 296 ITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGS 355
Query: 214 I-----DGNPSAWNLFVQNALISMYAKCGEVGIARGVFEKMIEKDAVSWNTMIGGYASNG 50
DG + V+NALI+MY++C + A +F+ K+ ++WN+M+ GY
Sbjct: 356 AIRSFYDGVDN-----VKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMD 410
Query: 49 KWPEAFEVFERMHMNG 2
+ EA +F M ++G
Sbjct: 411 RSEEASFLFREMLLSG 426
>ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 186 bits (473), Expect = 1e-45
Identities = 85/143 (59%), Positives = 108/143 (75%)
Frame = -1
Query: 442 IKEAHVITMASNIFHPLSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLKA 263
+ EAH + SN+F P SWN+LI +YVK+ YE A+ Y MV+KGVRPD FT+PS+LKA
Sbjct: 130 LPEAHTLVETSNLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKA 189
Query: 262 CGELSNLEFGAKVHKSIDGNPSAWNLFVQNALISMYAKCGEVGIARGVFEKMIEKDAVSW 83
CGE NL+FG +VHKSI+ + W+LFV NALISMY +CGEV AR +F+ M+E+DAVSW
Sbjct: 190 CGETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSW 249
Query: 82 NTMIGGYASNGKWPEAFEVFERM 14
N+MI Y+S G W EAFE+FE M
Sbjct: 250 NSMISCYSSRGMWREAFELFESM 272
Score = 79.7 bits (195), Expect = 2e-13
Identities = 42/144 (29%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Frame = -1
Query: 442 IKEAHVITMASNIFHPLSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLKA 263
I+ A+++ ++ ++WN ++ EEAL ++ ++ GV PD T+ S+L
Sbjct: 367 IRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPL 426
Query: 262 CGELSNLEFGAKVHKSIDGNPSAWN-LFVQNALISMYAKCGEVGIARGVFEKMIEKDAVS 86
C +++L+ G + H I + + L + NAL+ MYA+ G+V A+ +F + +KD V+
Sbjct: 427 CARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVT 486
Query: 85 WNTMIGGYASNGKWPEAFEVFERM 14
+ ++I GY G+ +A +FE M
Sbjct: 487 YTSLIAGYGMQGEGGKAVRLFEEM 510
Score = 64.7 bits (156), Expect = 7e-09
Identities = 35/131 (26%), Positives = 66/131 (50%)
Frame = -1
Query: 394 LSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLKACGELSNLEFGAKVHKS 215
++WN++ ++ ++ +AL + S M N G+ D L AC + + G ++H
Sbjct: 282 VTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGF 341
Query: 214 IDGNPSAWNLFVQNALISMYAKCGEVGIARGVFEKMIEKDAVSWNTMIGGYASNGKWPEA 35
+ VQNAL++MYA+C ++ A +F +K ++WN+M+ G G+ EA
Sbjct: 342 TIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEA 401
Query: 34 FEVFERMHMNG 2
+F + + G
Sbjct: 402 LCLFRELLLFG 412
>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 184 bits (468), Expect = 5e-45
Identities = 89/144 (61%), Positives = 109/144 (75%)
Frame = -1
Query: 445 LIKEAHVITMASNIFHPLSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLK 266
L+ +AHVIT SNI HP WNLLI +YV+N ++ALS Y MV KG+RPD FTYPSVLK
Sbjct: 150 LLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLK 209
Query: 265 ACGELSNLEFGAKVHKSIDGNPSAWNLFVQNALISMYAKCGEVGIARGVFEKMIEKDAVS 86
ACGE +L FG +VH+SI+ + W+L V NALISMY KCG+VGIAR +F+K+ E+DAVS
Sbjct: 210 ACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVS 269
Query: 85 WNTMIGGYASNGKWPEAFEVFERM 14
WN+MI YAS G W EAFE+F M
Sbjct: 270 WNSMISVYASMGMWNEAFELFGSM 293
Score = 77.8 bits (190), Expect = 9e-13
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -1
Query: 442 IKEAHVITMASNIFHPLSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLKA 263
+K A+++ ++WN +I D EEA + M+ G+ P+ T SVL
Sbjct: 388 LKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPL 447
Query: 262 CGELSNLEFGAKVHKSIDGNPSAWN-LFVQNALISMYAKCGEVGIARGVFEKMIEKDAVS 86
C ++NL+ G + H + + L + NAL+ MYA+ G+V AR VF+ + E+D ++
Sbjct: 448 CARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMT 507
Query: 85 WNTMIGGYASNGKWPEAFEVFERMH 11
+ +MI GY G+ A ++FE M+
Sbjct: 508 YTSMIAGYGMQGEGQAALKLFEEMN 532
Score = 58.2 bits (139), Expect = 7e-07
Identities = 35/129 (27%), Positives = 62/129 (48%)
Frame = -1
Query: 388 WNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLKACGELSNLEFGAKVHKSID 209
WN + Y++ +Y+ AL + S M G D L AC + + + G ++H
Sbjct: 305 WNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAI 364
Query: 208 GNPSAWNLFVQNALISMYAKCGEVGIARGVFEKMIEKDAVSWNTMIGGYASNGKWPEAFE 29
+ V+NALI+MY++C ++ A +F+ M K ++WN++I G + EA
Sbjct: 365 RSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASF 424
Query: 28 VFERMHMNG 2
+ M + G
Sbjct: 425 LLREMLLFG 433
>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 184 bits (468), Expect = 5e-45
Identities = 89/144 (61%), Positives = 109/144 (75%)
Frame = -1
Query: 445 LIKEAHVITMASNIFHPLSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLK 266
L+ +AHVIT SNI HP WNLLI +YV+N ++ALS Y MV KG+RPD FTYPSVLK
Sbjct: 224 LLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLK 283
Query: 265 ACGELSNLEFGAKVHKSIDGNPSAWNLFVQNALISMYAKCGEVGIARGVFEKMIEKDAVS 86
ACGE +L FG +VH+SI+ + W+L V NALISMY KCG+VGIAR +F+K+ E+DAVS
Sbjct: 284 ACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVS 343
Query: 85 WNTMIGGYASNGKWPEAFEVFERM 14
WN+MI YAS G W EAFE+F M
Sbjct: 344 WNSMISVYASMGMWNEAFELFGSM 367
Score = 80.1 bits (196), Expect = 2e-13
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -1
Query: 442 IKEAHVITMASNIFHPLSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLKA 263
+K A+++ +SWN +I D EEA + M+ G+ P+ T SVL
Sbjct: 462 LKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPL 521
Query: 262 CGELSNLEFGAKVHKSIDGNPSAWN-LFVQNALISMYAKCGEVGIARGVFEKMIEKDAVS 86
C ++NL+ G + H + + L + NAL+ MYA+ G+V AR VF+ + E+D ++
Sbjct: 522 CARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMT 581
Query: 85 WNTMIGGYASNGKWPEAFEVFERMH 11
+ +MI GY G+ A ++FE M+
Sbjct: 582 YTSMIAGYGMQGEGQAALKLFEEMN 606
Score = 60.5 bits (145), Expect = 1e-07
Identities = 35/129 (27%), Positives = 63/129 (48%)
Frame = -1
Query: 388 WNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLKACGELSNLEFGAKVHKSID 209
WN + Y++ +Y+ AL + S M G D L AC + + + G ++H
Sbjct: 379 WNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAI 438
Query: 208 GNPSAWNLFVQNALISMYAKCGEVGIARGVFEKMIEKDAVSWNTMIGGYASNGKWPEAFE 29
+ V+N+LI+MY++C ++ A +F+ M K +SWN++I G + EA
Sbjct: 439 RSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASF 498
Query: 28 VFERMHMNG 2
+ M ++G
Sbjct: 499 LLREMLLSG 507
>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
predicted protein [Populus trichocarpa]
Length = 683
Score = 174 bits (441), Expect = 7e-42
Identities = 86/149 (57%), Positives = 109/149 (73%), Gaps = 1/149 (0%)
Frame = -1
Query: 445 LIKEAHVITMASNIFHPLSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLK 266
L+ +AH IT+ S+I +PL WNLLI +YV N + EALS Y MV+KGVRPD FTYPSVLK
Sbjct: 91 LLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLK 150
Query: 265 ACGELSNLEFGAKVHKSID-GNPSAWNLFVQNALISMYAKCGEVGIARGVFEKMIEKDAV 89
ACGE +L+FG +VH+SI+ WNL+V N+L+SMY K GE+ AR +F +M E+DAV
Sbjct: 151 ACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAV 210
Query: 88 SWNTMIGGYASNGKWPEAFEVFERMHMNG 2
SWN +I YAS G W EAFE+FE M + G
Sbjct: 211 SWNGIISNYASRGLWKEAFELFEEMRLAG 239
Score = 75.1 bits (183), Expect = 6e-12
Identities = 39/127 (30%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Frame = -1
Query: 391 SWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTYPSVLKACGELSNLEFGAKVHKSI 212
+WN ++ Y D EEA ++ M+ G+ P+ T S+L C ++NL+ G + H I
Sbjct: 347 TWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYI 406
Query: 211 DGNPSAWN-LFVQNALISMYAKCGEVGIARGVFEKMIEKDAVSWNTMIGGYASNGKWPEA 35
+ L + N+L+ MYA+ G+V A+ VF+ + +D V++ ++I GY G+ A
Sbjct: 407 MRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTA 466
Query: 34 FEVFERM 14
++F+ M
Sbjct: 467 LKLFDEM 473
Score = 59.3 bits (142), Expect = 3e-07
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Frame = -1
Query: 448 GLIKEAHVI----TMASNIFHPLSWNLLIYAYVKNDHYEEALSVYSYMVNKGVRPDKFTY 281
GL KEA + +A + ++WN + V+ +++ AL + S M + D
Sbjct: 223 GLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAM 282
Query: 280 PSVLKACGELSNLEFGAKVHKSIDGNPSAWNLF--VQNALISMYAKCGEVGIARGVFEKM 107
L AC + ++ G +H S S ++ F V+NALI+MY++C ++ A +F+ +
Sbjct: 283 IIGLGACSHIGAIKLGTVIHAS--AIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSI 340
Query: 106 IEKDAVSWNTMIGGYASNGKWPEAFEVFERMHMNG 2
K +WN+M+ GY + EA +F M +G
Sbjct: 341 KTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSG 375