BLASTX nr result

ID: Lithospermum22_contig00027697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027697
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   314   2e-83
ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|...   302   8e-80
ref|XP_002300832.1| f-box family protein [Populus trichocarpa] g...   298   2e-78
ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g...   297   3e-78
ref|XP_002878504.1| kelch repeat-containing F-box family protein...   290   3e-76

>ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Vitis
           vinifera] gi|359479635|ref|XP_003632310.1| PREDICTED:
           F-box/kelch-repeat protein SKIP30-like isoform 2 [Vitis
           vinifera] gi|359479637|ref|XP_003632311.1| PREDICTED:
           F-box/kelch-repeat protein SKIP30-like isoform 3 [Vitis
           vinifera]
          Length = 345

 Score =  314 bits (805), Expect = 2e-83
 Identities = 147/203 (72%), Positives = 175/203 (86%), Gaps = 1/203 (0%)
 Frame = +2

Query: 5   RAPMIVPRSMFACCILDGKVIVAGGFTNCRKSISQAEVYDPEKDTWVSISDLHYTHNSAS 184
           RAPM+VPR+MFACC+LDGK++VAGGFT+CRKSISQAE+YDPEKD WVSI DLH THNSA 
Sbjct: 143 RAPMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEIYDPEKDAWVSIPDLHRTHNSAC 202

Query: 185 SGVVIEGKVHVLHKGLSSVQVLDDIKQGWSVHDYGWLQGPMAVVRGELYVMTHGLIYKQK 364
           SGVV++GKVHVLHKGL++VQ+LD +  GW V DYGWLQGPMA+V+G LYVM+HG+I+KQ+
Sbjct: 203 SGVVLDGKVHVLHKGLTTVQILDKVGPGWRVEDYGWLQGPMAIVQGALYVMSHGIIFKQE 262

Query: 365 INSSKEVVPAPDFGKIIGCAITGLGDDIYVIGGV-GPEILNWDIKALSDVDVLTPGSERP 541
               K VV A +F + IG A+TGL D+IYVIGGV GP+  NWDIK LSDVDVLT GSERP
Sbjct: 263 REVKKMVVSASEFRRRIGFAMTGLRDEIYVIGGVIGPDRWNWDIKPLSDVDVLTIGSERP 322

Query: 542 VWRKVSPMTKCRGSILGCTQLRI 610
            WR+VSPM++CRG+I GCTQLRI
Sbjct: 323 AWRQVSPMSQCRGTIFGCTQLRI 345


>ref|XP_002524761.1| Protein AFR, putative [Ricinus communis]
           gi|223535945|gb|EEF37604.1| Protein AFR, putative
           [Ricinus communis]
          Length = 345

 Score =  302 bits (773), Expect = 8e-80
 Identities = 142/204 (69%), Positives = 169/204 (82%), Gaps = 1/204 (0%)
 Frame = +2

Query: 2   LRAPMIVPRSMFACCILDGKVIVAGGFTNCRKSISQAEVYDPEKDTWVSISDLHYTHNSA 181
           LRA M+VPR+MFACC+L GK++VAGGFT+CRKSISQAE+YDPEKD W+ I DLH THNSA
Sbjct: 142 LRASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEMYDPEKDVWIPIPDLHRTHNSA 201

Query: 182 SSGVVIEGKVHVLHKGLSSVQVLDDIKQGWSVHDYGWLQGPMAVVRGELYVMTHGLIYKQ 361
            SG+VI GKVH+LHKGLS+VQVLD++  GW+V DY WLQGPMAVV G LYVM+HGLI KQ
Sbjct: 202 CSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNWLQGPMAVVHGALYVMSHGLICKQ 261

Query: 362 KINSSKEVVPAPDFGKIIGCAITGLGDDIYVIGGV-GPEILNWDIKALSDVDVLTPGSER 538
           +    K VV A +F + IG A+TGLGDDIYVIGGV GP+  NWDIK +SDVD+L  G ER
Sbjct: 262 EGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGVIGPDRWNWDIKPMSDVDILAVGGER 321

Query: 539 PVWRKVSPMTKCRGSILGCTQLRI 610
           P WR+ +PM++CRG+ILGC QLRI
Sbjct: 322 PTWRQAAPMSRCRGTILGCAQLRI 345


>ref|XP_002300832.1| f-box family protein [Populus trichocarpa]
           gi|222842558|gb|EEE80105.1| f-box family protein
           [Populus trichocarpa]
          Length = 345

 Score =  298 bits (762), Expect = 2e-78
 Identities = 142/203 (69%), Positives = 168/203 (82%), Gaps = 1/203 (0%)
 Frame = +2

Query: 5   RAPMIVPRSMFACCILDGKVIVAGGFTNCRKSISQAEVYDPEKDTWVSISDLHYTHNSAS 184
           RA M+VPR+MFACC L+GK++VAGGFT+C+KSISQAE+YDPEKD WV I DLH THNSA 
Sbjct: 143 RASMLVPRAMFACCALNGKIVVAGGFTSCQKSISQAEMYDPEKDVWVPIPDLHRTHNSAC 202

Query: 185 SGVVIEGKVHVLHKGLSSVQVLDDIKQGWSVHDYGWLQGPMAVVRGELYVMTHGLIYKQK 364
           SGVVI GK+HVLH+GLS+VQVLD I  GW+V DYGWLQGPMAVV   LYVM+HGLI KQ+
Sbjct: 203 SGVVIGGKLHVLHRGLSTVQVLDSIGSGWTVEDYGWLQGPMAVVHDALYVMSHGLIVKQE 262

Query: 365 INSSKEVVPAPDFGKIIGCAITGLGDDIYVIGGV-GPEILNWDIKALSDVDVLTPGSERP 541
             + K VV A +F K IG A+TGLGD++YVIGGV GP+  NWDIK +SDVD+LT G ERP
Sbjct: 263 GKTRKVVVSASEFRKRIGFAMTGLGDEMYVIGGVIGPDRWNWDIKPVSDVDILTVGGERP 322

Query: 542 VWRKVSPMTKCRGSILGCTQLRI 610
            WR+ +PMT+CRG+I GC QLRI
Sbjct: 323 TWRQATPMTRCRGTIRGCAQLRI 345


>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
           gi|118482816|gb|ABK93324.1| unknown [Populus
           trichocarpa] gi|222857044|gb|EEE94591.1| f-box family
           protein [Populus trichocarpa]
          Length = 345

 Score =  297 bits (760), Expect = 3e-78
 Identities = 140/203 (68%), Positives = 169/203 (83%), Gaps = 1/203 (0%)
 Frame = +2

Query: 5   RAPMIVPRSMFACCILDGKVIVAGGFTNCRKSISQAEVYDPEKDTWVSISDLHYTHNSAS 184
           RA M+VPR+MFAC  L+GK++VAGGFT+CRKSISQAE+YDPEKD W+ I DLH THNS  
Sbjct: 143 RASMLVPRAMFACGTLNGKIVVAGGFTSCRKSISQAEMYDPEKDVWIPIPDLHRTHNSTC 202

Query: 185 SGVVIEGKVHVLHKGLSSVQVLDDIKQGWSVHDYGWLQGPMAVVRGELYVMTHGLIYKQK 364
           SGVVI GK+HVLH+GLS+VQVLD++  GW+V DYGWLQGPMAVV   LYVM+HGLI+KQ+
Sbjct: 203 SGVVIGGKLHVLHRGLSTVQVLDNVGSGWTVEDYGWLQGPMAVVHDALYVMSHGLIFKQE 262

Query: 365 INSSKEVVPAPDFGKIIGCAITGLGDDIYVIGGV-GPEILNWDIKALSDVDVLTPGSERP 541
             + K VV A +F K IG A+ GLGDDIYVIGGV GP+  NWDI+ +SDVD+LT G +RP
Sbjct: 263 GKTRKVVVSASEFRKRIGFAMMGLGDDIYVIGGVIGPDRWNWDIRPMSDVDILTVGGDRP 322

Query: 542 VWRKVSPMTKCRGSILGCTQLRI 610
            WR+ +PMT+CRG+ILGCTQLRI
Sbjct: 323 TWRQATPMTRCRGTILGCTQLRI 345


>ref|XP_002878504.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324342|gb|EFH54763.1| kelch
           repeat-containing F-box family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 345

 Score =  290 bits (742), Expect = 3e-76
 Identities = 133/202 (65%), Positives = 167/202 (82%), Gaps = 1/202 (0%)
 Frame = +2

Query: 8   APMIVPRSMFACCILDGKVIVAGGFTNCRKSISQAEVYDPEKDTWVSISDLHYTHNSASS 187
           APM++PR+MFACC+L GK++VAGGFT CRKSIS AE+YDPE D W SI DLH THNSA S
Sbjct: 144 APMLLPRAMFACCVLQGKIVVAGGFTTCRKSISGAEMYDPENDAWTSIPDLHRTHNSACS 203

Query: 188 GVVIEGKVHVLHKGLSSVQVLDDIKQGWSVHDYGWLQGPMAVVRGELYVMTHGLIYKQKI 367
           G+V+ GKVHVLHKGLS+VQVL+ +K GW+V DYGW QGPMAVV   LYVM+HGL++KQ+ 
Sbjct: 204 GLVVNGKVHVLHKGLSTVQVLESVKLGWAVKDYGWPQGPMAVVEDVLYVMSHGLVFKQEG 263

Query: 368 NSSKEVVPAPDFGKIIGCAITGLGDDIYVIGGV-GPEILNWDIKALSDVDVLTPGSERPV 544
           ++ K V  A +F + IG A+T L +++ ++GGV GP+ LNWDIK LSDVDVLT G++RP 
Sbjct: 264 DTWKMVASASEFKRRIGMAMTSLSEEVLIVGGVIGPDRLNWDIKPLSDVDVLTVGNDRPA 323

Query: 545 WRKVSPMTKCRGSILGCTQLRI 610
           WR+V+PMT+CRG+ILGCTQL I
Sbjct: 324 WRRVAPMTRCRGTILGCTQLTI 345


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