BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027636
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...   100   1e-18
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...   100   1e-18
ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [S...    96   3e-17
gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold ...    62   8e-17
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    70   9e-10

>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 60/174 (34%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
 Frame = +3

Query: 84  PMLCMQGFNLPIVTCYQINSSISNYWWGDMENKKNIHW--WPMIHYAGIKQMVVWVLEIP 257
           P   M  F LP   C +I S + N+WWG  E  + IHW  W  +  + ++  + +     
Sbjct: 50  PTYIMSCFRLPDGVCXEIESMVCNFWWGQKEETRKIHWTSWKQLCKSKLRGGMGFRCLQH 109

Query: 258 MLSIWYF*ANRHGVLCRIPRHNWHRTTRHVFFPHGNFWTTTVGSSPSLTWKSLMSARDLL 437
             S     A +   L + P+    R  +  +FP  +F    VGS+PS TW+S++ +R LL
Sbjct: 110 FNSALL--AKQCWRLXQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSRRLL 167

Query: 438 IKGTSWTICSGRTIKVWTYKWLPLTTSNKPITPPNKDYADLRVCDLIDSEVGVW 599
             G  W + +G +I V   KW+P   S K I PP+    D RV DLIDSE G W
Sbjct: 168 NAGLRWRVGNGASISVKYDKWVPRPHSFKVILPPSTLSDDARVSDLIDSEKGAW 221



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2   RIEDWKPKILSKAGKVIFITLVLQSIPTYAMHA-GLQSTYCYMLSNQL*HLKLLVGRYGK 178
           R+  WK K LS AG+ + I  V Q+IPTY M    L    C  + + +       G+  +
Sbjct: 24  RLNGWKEKSLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCXEIESMV--CNFWWGQKEE 81

Query: 179 *EKYTLVAYDTLCRDKTDGGLGFRDSHAFNMVLLGKQAWRIVSDPSTQLAQNYKACIFPS 358
             K    ++  LC+ K  GG+GFR    FN  LL KQ WR+   P + +A+ +KA  FP 
Sbjct: 82  TRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKARYFPQ 141

Query: 359 WKFLD 373
             FLD
Sbjct: 142 TSFLD 146


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 59/180 (32%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
 Frame = +3

Query: 84  PMLCMQGFNLPIVTCYQINSSISNYWWGDMENKKNIHW--WPMIHYA------GIKQMVV 239
           P   M  F LP   C++I S + N+WW   E  + IHW  W  +  +      G + +  
Sbjct: 50  PTYIMSCFRLPDGVCHEIESMVCNFWWXQKEETRKIHWTSWKQLCKSKLQGGMGFRCLQX 109

Query: 240 WVLEIPMLSIWYF*ANRHGVLCRIPRHNWHRTTRHVFFPHGNFWTTTVGSSPSLTWKSLM 419
           +   +     W         L + P+    R  +  +FP  +F    VGS+PS TW+S++
Sbjct: 110 FNSALLAKQCWR--------LVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRSIV 161

Query: 420 SARDLLIKGTSWTICSGRTIKVWTYKWLPLTTSNKPITPPNKDYADLRVCDLIDSEVGVW 599
            +R LL  G  W + +G +I V   KW+P   S K I PP+    D RV DLIDSE G W
Sbjct: 162 GSRSLLNAGLRWRVGNGASISVKYDKWVPRPHSFKVILPPSTLSDDARVSDLIDSEKGAW 221



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
 Frame = +2

Query: 2   RIEDWKPKILSKAGKVIFITLVLQSIPTYAMHAGLQSTYCYMLSNQL*H-LKLLVGRY-- 172
           R+  WK K LS AG+ + I  V Q+IPTY M        C+ L + + H ++ +V  +  
Sbjct: 24  RLNGWKEKFLSVAGREVLIKSVAQAIPTYIMS-------CFRLPDGVCHEIESMVCNFWW 76

Query: 173 ---GK*EKYTLVAYDTLCRDKTDGGLGFRDSHAFNMVLLGKQAWRIVSDPSTQLAQNYKA 343
               +  K    ++  LC+ K  GG+GFR    FN  LL KQ WR+V  P + +A+ +KA
Sbjct: 77  XQKEETRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKA 136

Query: 344 CIFPSWKFLD 373
             FP   FLD
Sbjct: 137 RYFPQTSFLD 146


>ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [Sorghum bicolor]
           gi|241917195|gb|EER90339.1| hypothetical protein
           SORBIDRAFT_10g029210 [Sorghum bicolor]
          Length = 240

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2   RIEDWKPKILSKAGKVIFITLVLQSIPTYAMHA-GLQSTYCYMLSNQL*HLKLLVGRYGK 178
           RI+ WK K+LSKAGK I I  V Q+IPTYAM    L  T C  +S  +     L  +   
Sbjct: 19  RIQGWKEKLLSKAGKEILIKAVAQAIPTYAMSCFDLTKTLCDEISTMI--CCYLWSQQDN 76

Query: 179 *EKYTLVAYDTLCRDKTDGGLGFRDSHAFNMVLLGKQAWRIVSDPSTQLAQNYKACIFPS 358
             K   +++DT+CR K +GGLGFRD H FN+ +L +QAWR++  P +   Q  KA  + +
Sbjct: 77  KNKMHWISWDTMCRRKEEGGLGFRDLHLFNLAMLARQAWRLLMTPDSLCGQVLKAKYYRN 136

Query: 359 WKFLD 373
              LD
Sbjct: 137 CGLLD 141


>gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 380

 Score = 62.4 bits (150), Expect(2) = 8e-17
 Identities = 29/84 (34%), Positives = 42/84 (50%)
 Frame = +3

Query: 348 FFPHGNFWTTTVGSSPSLTWKSLMSARDLLIKGTSWTICSGRTIKVWTYKWLPLTTSNKP 527
           +FPH ++++ ++G +PS  W+SL S RD L  G  W+I  G TI VW   WL      +P
Sbjct: 53  YFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIGMGETISVWNQPWLKDPLCLQP 112

Query: 528 ITPPNKDYADLRVCDLIDSEVGVW 599
           +T     +  L V  L       W
Sbjct: 113 VTEVQIMWDALTVGHLFKPNTKEW 136



 Score = 52.0 bits (123), Expect(2) = 8e-17
 Identities = 21/51 (41%), Positives = 35/51 (68%)
 Frame = +2

Query: 203 YDTLCRDKTDGGLGFRDSHAFNMVLLGKQAWRIVSDPSTQLAQNYKACIFP 355
           ++ L   KT GG+GF+   AFN+ ++GKQAW+++S+P + + +  KA  FP
Sbjct: 5   WERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKLLKAKYFP 55


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 70.5 bits (171), Expect = 9e-10
 Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
 Frame = +3

Query: 78   SPPMLCMQGFNLPIVTCYQINSSISNYWWGDMENKKNIHWWPMIHYA--------GIKQM 233
            S P   MQ   LP   C  I S ++ ++W      ++I W               G +++
Sbjct: 1354 SIPTYVMQLLLLPKDLCRDIESMMNXFFWDSNPQXRSIRWMSWXKMCKQKKDGGLGFRKL 1413

Query: 234  VVWVLEIPMLSIWYF*ANRHGVLCRIPRHNWHRTTRHVFFPHGNFWTTTVGSSPSLTWKS 413
              + L +       F  N   ++  I +          +F + +F    +GS+PS  W+S
Sbjct: 1414 EDFNLALLAKQGXRFLQNLDSLVTIIFQAR--------YFRNSSFLNAELGSNPSYMWRS 1465

Query: 414  LMSARDLLIKGTSWTICSGRTIKVWTYKWLPLTTSNKPITPPNKDYADLRVCDLIDSEVG 593
            +++A+DLL  G  W+I SG  ++VW   WLP +++   ITP   D+  ++V +LI    G
Sbjct: 1466 ILAAQDLLKMGCYWSIASGTKVQVWGDSWLPNSSNRLIITPHVADFDGIKVDELITK--G 1523

Query: 594  VW 599
            +W
Sbjct: 1524 LW 1525



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2    RIEDWKPKILSKAGKVIFITLVLQSIPTYAMH-AGLQSTYCYMLSNQL*HLKLLVGRYGK 178
            RI++W  + LS+AGK I +  V QSIPTY M    L    C  + + +           +
Sbjct: 1330 RIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMM--NXFFWDSNPQ 1387

Query: 179  *EKYTLVAYDTLCRDKTDGGLGFRDSHAFNMVLLGKQAWRIVSDPSTQLAQNYKACIFPS 358
                  +++  +C+ K DGGLGFR    FN+ LL KQ  R + +  + +   ++A  F +
Sbjct: 1388 XRSIRWMSWXKMCKQKKDGGLGFRKLEDFNLALLAKQGXRFLQNLDSLVTIIFQARYFRN 1447

Query: 359  WKFLD 373
              FL+
Sbjct: 1448 SSFLN 1452