BLASTX nr result

ID: Lithospermum22_contig00027613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027613
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522952.1| dead box ATP-dependent RNA helicase, putativ...   148   4e-34
ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   146   2e-33
ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   143   1e-32
ref|XP_002278373.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   141   5e-32
emb|CAN82075.1| hypothetical protein VITISV_016661 [Vitis vinifera]   141   5e-32

>ref|XP_002522952.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537764|gb|EEF39382.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 753

 Score =  148 bits (374), Expect = 4e-34
 Identities = 80/127 (62%), Positives = 92/127 (72%)
 Frame = -3

Query: 381 TKSRKFKVQVRNHEAQEIELIEAWIEWGQXXXXXXXXXXXXXXXXXPIGRLPDGTFSRYA 202
           +KSR+ + Q RN E +EI L+  WIE                    PIGRLPDGTFSRYA
Sbjct: 6   SKSREKRKQRRNLEQEEIALLNDWIE---SQKPDSGSNPLSLPENSPIGRLPDGTFSRYA 62

Query: 201 GAEKFSQLPLSKKTKDGLNQAKYKKMTDIQRASLPHSLCGRDILGAAKTGSGKTLAFIIP 22
           G  KF +LPLSK+TKDGL +A Y  MT+IQRASLPHSLCGRDILGAAKTGSGKTLAF+IP
Sbjct: 63  GCTKFKELPLSKRTKDGLTKAGYITMTEIQRASLPHSLCGRDILGAAKTGSGKTLAFVIP 122

Query: 21  ILEKLNR 1
           +LEKL+R
Sbjct: 123 VLEKLHR 129


>ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
           max]
          Length = 743

 Score =  146 bits (369), Expect = 2e-33
 Identities = 75/129 (58%), Positives = 91/129 (70%)
 Frame = -3

Query: 387 RGTKSRKFKVQVRNHEAQEIELIEAWIEWGQXXXXXXXXXXXXXXXXXPIGRLPDGTFSR 208
           R  KS++F+ Q R  E +EI L+ +WI++                   P+GRL D T+SR
Sbjct: 2   RRPKSKEFRKQQRVSEEEEINLLNSWIQFQPPDSGSNPMSLPRLPKNSPVGRLEDNTYSR 61

Query: 207 YAGAEKFSQLPLSKKTKDGLNQAKYKKMTDIQRASLPHSLCGRDILGAAKTGSGKTLAFI 28
           YAGA +F Q PLSKKTKD L ++K+  MTDIQRASLPH+LCGRDILGAAKTGSGKTLAFI
Sbjct: 62  YAGASRFDQFPLSKKTKDALRESKFVAMTDIQRASLPHALCGRDILGAAKTGSGKTLAFI 121

Query: 27  IPILEKLNR 1
           IP+LEKL R
Sbjct: 122 IPVLEKLYR 130


>ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
           max]
          Length = 746

 Score =  143 bits (361), Expect = 1e-32
 Identities = 76/130 (58%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
 Frame = -3

Query: 387 RGTKSRKFKVQVRNHEAQEIELIEAWIEWGQXXXXXXXXXXXXXXXXXPIGRLPDG-TFS 211
           R  KSR+F+ Q R  E +EI L+ +WI++                   P+GRL D  T+S
Sbjct: 2   RRPKSREFRKQQRVSEEEEINLLNSWIQFQPPDSGSNPMSLPPLPKNSPVGRLDDDDTYS 61

Query: 210 RYAGAEKFSQLPLSKKTKDGLNQAKYKKMTDIQRASLPHSLCGRDILGAAKTGSGKTLAF 31
           RYAGA +F Q PLSKKTKD L ++K+  MTDIQRASLPH+LCGRDILGAAKTGSGKTLAF
Sbjct: 62  RYAGASRFEQFPLSKKTKDALRESKFVVMTDIQRASLPHALCGRDILGAAKTGSGKTLAF 121

Query: 30  IIPILEKLNR 1
           IIP+LEKL+R
Sbjct: 122 IIPVLEKLHR 131


>ref|XP_002278373.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32 [Vitis vinifera]
          Length = 750

 Score =  141 bits (356), Expect = 5e-32
 Identities = 74/130 (56%), Positives = 92/130 (70%)
 Frame = -3

Query: 390 NRGTKSRKFKVQVRNHEAQEIELIEAWIEWGQXXXXXXXXXXXXXXXXXPIGRLPDGTFS 211
           N   + R+F  Q R  E QEIEL+E+WIE+G+                 PIGR+   +FS
Sbjct: 5   NSRPQKRQFVKQKRLTELQEIELLESWIEFGKPDSGSNPLSLAPPPSNAPIGRIDGDSFS 64

Query: 210 RYAGAEKFSQLPLSKKTKDGLNQAKYKKMTDIQRASLPHSLCGRDILGAAKTGSGKTLAF 31
            YAG ++F +LPLS+KT DGL +++Y  MT+IQRASLPHSLCGRDILGAAKTGSGKTLAF
Sbjct: 65  PYAGCDRFDRLPLSQKTIDGLKKSEYVTMTEIQRASLPHSLCGRDILGAAKTGSGKTLAF 124

Query: 30  IIPILEKLNR 1
           +IP+LEKL R
Sbjct: 125 LIPVLEKLYR 134


>emb|CAN82075.1| hypothetical protein VITISV_016661 [Vitis vinifera]
          Length = 960

 Score =  141 bits (356), Expect = 5e-32
 Identities = 74/130 (56%), Positives = 92/130 (70%)
 Frame = -3

Query: 390 NRGTKSRKFKVQVRNHEAQEIELIEAWIEWGQXXXXXXXXXXXXXXXXXPIGRLPDGTFS 211
           N   + R+F  Q R  E QEIEL+E+WIE+G+                 PIGR+   +FS
Sbjct: 5   NSRPQKRQFVKQKRLTELQEIELLESWIEFGKPDSGSNPLSLAPPPSNAPIGRIDGDSFS 64

Query: 210 RYAGAEKFSQLPLSKKTKDGLNQAKYKKMTDIQRASLPHSLCGRDILGAAKTGSGKTLAF 31
            YAG ++F +LPLS+KT DGL +++Y  MT+IQRASLPHSLCGRDILGAAKTGSGKTLAF
Sbjct: 65  PYAGCDRFDRLPLSQKTIDGLKKSEYVTMTEIQRASLPHSLCGRDILGAAKTGSGKTLAF 124

Query: 30  IIPILEKLNR 1
           +IP+LEKL R
Sbjct: 125 LIPVLEKLYR 134


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