BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027519
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314653.1| predicted protein [Populus trichocarpa] gi|2...   176   6e-42
emb|CBI26363.3| unnamed protein product [Vitis vinifera]              149   7e-34
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...   147   4e-33
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep...   146   5e-33
ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II su...   141   2e-31

>ref|XP_002314653.1| predicted protein [Populus trichocarpa] gi|222863693|gb|EEF00824.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  176 bits (446), Expect = 6e-42
 Identities = 92/190 (48%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
 Frame = +3

Query: 135 MLAETDCCCHVVVPGKYLEKNGRVPGNVIVKALLQYLLNIKAMKDYGYFLAVTDLKSIGS 314
           M  E + C  V +  + L++NG VP   IV  LL+ LL++KA KD+GYFLAVT+LKSIG 
Sbjct: 1   MFGEVEVCSTVRIIAENLDRNGLVPQRSIVTHLLKDLLSMKASKDHGYFLAVTNLKSIGK 60

Query: 315 GHIEDSCGCAHFPVNFSCRIFTPIAGEIMVGIVHKVLRFGVFLKSGPMNYVYLSAQTMPN 494
           G + +  G   F V F CR F P+ GEI+ G+VH+  R GV L+ GP+ Y++LSA+ MPN
Sbjct: 61  GEVVNKSGDVLFHVEFKCRTFMPMKGEILQGVVHRTFRHGVLLRCGPVKYIFLSARKMPN 120

Query: 495 YHFEPGGENKSFLNNERSRIQIGVAIRFVILAARWAE----TEGEYGVLASLVGDSLGPI 662
           Y +    EN  FLN+E +RI+  V +RF +L  RW E       ++ +LASLVGDSLGPI
Sbjct: 121 YQY-TSEENPVFLNDELARIENNVLVRFSVLDVRWIEKMWDMRRDFMMLASLVGDSLGPI 179

Query: 663 ALAGNDGLDI 692
           +L G+D LD+
Sbjct: 180 SLCGSDELDL 189


>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  149 bits (376), Expect = 7e-34
 Identities = 76/180 (42%), Positives = 110/180 (61%)
 Frame = +3

Query: 126 ETKMLAETDCCCHVVVPGKYLEKNGRVPGNVIVKALLQYLLNIKAMKDYGYFLAVTDLKS 305
           +T+M  +     +V++P + L+  G +    I+  LL    N KA ++ GYFLAVT L++
Sbjct: 63  KTEMFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLEN 122

Query: 306 IGSGHIEDSCGCAHFPVNFSCRIFTPIAGEIMVGIVHKVLRFGVFLKSGPMNYVYLSAQT 485
           IG G +    G   FPV FSC  F    GEI+ G+VHKVL+ GV L+ GP+  +YLS Q 
Sbjct: 123 IGEGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQK 182

Query: 486 MPNYHFEPGGENKSFLNNERSRIQIGVAIRFVILAARWAETEGEYGVLASLVGDSLGPIA 665
           MP+Y + P GEN  FLN + S+I+  V +RF+++  +W E E E+  L SL GD LGP++
Sbjct: 183 MPDYRYVP-GENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAEREFQALVSLEGDYLGPLS 241


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147822056|emb|CAN61549.1| hypothetical
           protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score =  147 bits (370), Expect = 4e-33
 Identities = 74/168 (44%), Positives = 105/168 (62%)
 Frame = +3

Query: 162 HVVVPGKYLEKNGRVPGNVIVKALLQYLLNIKAMKDYGYFLAVTDLKSIGSGHIEDSCGC 341
           +V++P + L+  G +    I+  LL    N KA ++ GYFLAVT L++IG G +    G 
Sbjct: 10  NVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGEGKVRQHSGD 69

Query: 342 AHFPVNFSCRIFTPIAGEIMVGIVHKVLRFGVFLKSGPMNYVYLSAQTMPNYHFEPGGEN 521
             FPV FSC  F    GEI+ G+VHKVL+ GV L+ GP+  +YLS Q MP+Y + P GEN
Sbjct: 70  VLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPDYRYVP-GEN 128

Query: 522 KSFLNNERSRIQIGVAIRFVILAARWAETEGEYGVLASLVGDSLGPIA 665
             FLN + S+I+  V +RF+++  +W E E E+  L SL GD LGP++
Sbjct: 129 PVFLNEKLSKIEKDVVVRFIVMGTKWLEAEREFQALVSLEGDYLGPLS 176


>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223538083|gb|EEF39694.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  146 bits (369), Expect = 5e-33
 Identities = 72/168 (42%), Positives = 108/168 (64%)
 Frame = +3

Query: 162 HVVVPGKYLEKNGRVPGNVIVKALLQYLLNIKAMKDYGYFLAVTDLKSIGSGHIEDSCGC 341
           +V++  ++L+  G +    I+  LL+   + KA KD GY+LAVT L+SIG G + +  G 
Sbjct: 10  NVIISAEHLDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGEGKVREHTGD 69

Query: 342 AHFPVNFSCRIFTPIAGEIMVGIVHKVLRFGVFLKSGPMNYVYLSAQTMPNYHFEPGGEN 521
             FPV F+   F    GEI+ G+VHKVL+ GVF++ GP+  +YLS   MP+YH+ P GEN
Sbjct: 70  VLFPVVFNGITFKIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMPDYHYVP-GEN 128

Query: 522 KSFLNNERSRIQIGVAIRFVILAARWAETEGEYGVLASLVGDSLGPIA 665
             FLN++ S+I+  V +RF+++  +W E E E+  L SL GD LGP++
Sbjct: 129 PVFLNDKTSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS 176


>ref|XP_004134101.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449432630|ref|XP_004134102.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
           gi|449504102|ref|XP_004162253.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Cucumis sativus]
           gi|449504105|ref|XP_004162254.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Cucumis sativus]
          Length = 190

 Score =  141 bits (355), Expect = 2e-31
 Identities = 75/163 (46%), Positives = 104/163 (63%), Gaps = 5/163 (3%)
 Frame = +3

Query: 219 IVKALLQYLLNIKAMKDYGYFLAVTDLKSIGSGHIEDSCGCAHFPVNFSCRIFTPIAGEI 398
           I+  LL+ LL  KA KD+GYFL+VT L+SIG G +++   C  FP+ F CR F P  GEI
Sbjct: 29  IITCLLENLLKEKANKDHGYFLSVTSLRSIGKGIVKNESQCVSFPITFICRTFLPFEGEI 88

Query: 399 MVGIVHKVLRFGVFLKSGPMNYVYLSAQTMPNYHFEPGGENKSFLNNERSRIQIGVAIRF 578
           + G+V  + + G+ LK GP+ YV+LSA+ MP Y +  GGEN  F + E + I   V +RF
Sbjct: 89  LHGVVRHIFQRGLLLKCGPIKYVFLSARKMPTYQY-VGGENPVFSSKEFATIGNDVVVRF 147

Query: 579 VILAARWAETEG----EYGVLASLVG-DSLGPIALAGNDGLDI 692
            +L  RW E  G    E+ +LASL G +SLGPI+L+ +D  D+
Sbjct: 148 SVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL 190