BLASTX nr result

ID: Lithospermum22_contig00027510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027510
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        93   2e-17
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    89   4e-16
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            87   1e-15
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    87   1e-15

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/114 (41%), Positives = 64/114 (56%)
 Frame = +2

Query: 11   WGNQQLSFA*RLVMLNSVTFGVCNYWCQTVFIPKGIIKEIKRMMKRFLWKGVSA*KLLPK 190
            W N+ LSFA R+ +++SV FG  N+W  T  +PKG IK I+ +  RFLW G        K
Sbjct: 793  WVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIK 852

Query: 191  VTWKKATLRKEEGGLGIKSLYFWNLTCMSRHVWNMCVGKEAL*VRWINSVRLKR 352
            V+W    L K EGGLG++ L  WN T   R +W + V K++L   W +   L R
Sbjct: 853  VSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSR 906


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   INGWGNQQLSFA*RLVMLNSVTFGVCNYWCQTVFIPKGIIKEIKRMMKRFLWKGVSA*KL 181
           +  W  + LS+A R+ ++NSV F +  YW     +P  +IK ++++MK FLW G      
Sbjct: 84  VRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTT 143

Query: 182 LPKVTWKKATLRKEEGGLGIKSLYFWNLTCMSRHVWNMCVGKE-AL*VRWINSVRLK 349
             KV W +  L K+EGGLGIKS+  WN   + +H+WN+C   + ++   WI S  L+
Sbjct: 144 GAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLR 200


>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 37/112 (33%), Positives = 64/112 (57%)
 Frame = +2

Query: 2   INGWGNQQLSFA*RLVMLNSVTFGVCNYWCQTVFIPKGIIKEIKRMMKRFLWKGVSA*KL 181
           +N W    LS++ R+ +L SV F   NYW Q + +PKG+I+ I+ + + FLW G S    
Sbjct: 76  VNHWSAHTLSYSGRVQLLRSVIFATANYWMQCLPLPKGVIRRIEAVCRSFLWTGKSCVTK 135

Query: 182 LPKVTWKKATLRKEEGGLGIKSLYFWNLTCMSRHVWNMCVGKEAL*VRWINS 337
              V W K    K +GGL + +   WN  C+ + +WN+   +++L ++W+++
Sbjct: 136 KSPVAWNKVCAPKNQGGLNVINFQSWNKACLIKLLWNLYKKEDSLWIQWVHT 187


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/115 (37%), Positives = 64/115 (55%)
 Frame = +2

Query: 2   INGWGNQQLSFA*RLVMLNSVTFGVCNYWCQTVFIPKGIIKEIKRMMKRFLWKGVSA*KL 181
           +  W ++ LSFA R  +++SV FG+ N+W  T  +PKG IK+I+ +  +FLW G    + 
Sbjct: 650 LRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRK 709

Query: 182 LPKVTWKKATLRKEEGGLGIKSLYFWNLTCMSRHVWNMCVGKEAL*VRWINSVRL 346
             KV+W    L K EGGLG +S   WN T + R +W +     +L  +W    RL
Sbjct: 710 SSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRL 764


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/115 (35%), Positives = 68/115 (59%)
 Frame = +2

Query: 5    NGWGNQQLSFA*RLVMLNSVTFGVCNYWCQTVFIPKGIIKEIKRMMKRFLWKGVSA*KLL 184
            N W  + LSFA RL +++SV +   N+W  +  +PK  +K I++M  RFLW      +  
Sbjct: 790  NHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGD 849

Query: 185  PKVTWKKATLRKEEGGLGIKSLYFWNLTCMSRHVWNMCVGKEAL*VRWINSVRLK 349
             KV+W+ + L K EGGLG+++ + WN T   R +W +   +++L V W ++ RL+
Sbjct: 850  IKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLR 904


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