BLASTX nr result

ID: Lithospermum22_contig00027437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027437
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   7e-12
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    51   2e-11
emb|CAN66945.1| hypothetical protein VITISV_020092 [Vitis vinifera]    69   3e-11
emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera]    65   3e-11
emb|CAN63923.1| hypothetical protein VITISV_004023 [Vitis vinifera]    70   4e-11

>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 65.1 bits (157), Expect(3) = 7e-12
 Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
 Frame = +3

Query: 342 PGQVQNMWIKHDNFMNVVTNNWRLPMGGDAMSI-LWHKLKRLKGCLKQWNKEEFGNIFSV 518
           P +  N W+ H NF+  ++  W      +A ++ L  KLK+LK  LK+WNK EFG I + 
Sbjct: 238 PFRFLNCWVSHPNFLPTISLAW-----ANAQNLPLPDKLKQLKLKLKEWNKSEFGAIDTK 292

Query: 519 VAQAEDQVLHCEQVL-ENSNTPADIEAFNNARANHLRCLALEEEYWSQLSGIKWFEFGGQ 695
           + + ED + H + +  + + + +++++  + + +    L   E YW+Q+S  KW + G +
Sbjct: 293 IKELEDLIQHFDDIANDRTLSDSELDSRKSVQMDLWSWLKKREAYWAQVSRSKWLKEGDR 352

Query: 696 VNSLF 710
               F
Sbjct: 353 NTKFF 357



 Score = 29.6 bits (65), Expect(3) = 7e-12
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 112 INHTPWMVMGDFNTVAAPTEQ-LGCKPQRGRNDFVECIDHCKLED 243
           IN  P ++MGDFN V + +E+  G   Q G  DF   I    L D
Sbjct: 131 INIFPTLIMGDFNEVLSSSERGSGLSSQEGVEDFRNFIQSLGLID 175



 Score = 21.9 bits (45), Expect(3) = 7e-12
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 257 GQSFKRMDRLLMNASCANRFVVMGVKHLARTGSEH 361
           G    R+DR L+ +    ++  + ++ L RT S+H
Sbjct: 188 GNRKSRLDRCLVTSDWIQQYPNLSLQILNRTVSDH 222


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 51.2 bits (121), Expect(3) = 2e-11
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
 Frame = +3

Query: 360 MWIKHDNFMNVVTNNWRLPMGGDAMSILWHKLKRLKGCLKQWNKEEFGNIFSVVAQAEDQ 539
           MW  HD+   ++ + W + + G  + +L  KLK        WNK+ FGNI   V QAE +
Sbjct: 10  MWTLHDSCQKLIEDCWNVRVLGSPLYVLSSKLK-------VWNKDVFGNILIQVTQAEKK 62

Query: 540 VLHCEQVLENSNTPADI-EAFNNARANHLRCLALEEEYWSQLSGIKWFEFGGQVNSLF 710
           +   +  +  S    ++  A   A+ N    L  +E +W + + +KW   GG  N+ +
Sbjct: 63  LSDIQNHINTSGHNDNLMNAEKIAQTNLDLALQKQETFWVEKAKLKW-HVGGDRNTKY 119



 Score = 34.7 bits (78), Expect(3) = 2e-11
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
 Frame = +2

Query: 824 KELFQGESQDTEVD--ILEDCIPKLVTDSDNVTFLSTPSWEEVKNVVFSLD 970
           +E+   +++ +E D  ++E+ IPKLV  + N      P+ EEVKN VF L+
Sbjct: 140 EEILTDQTRISEHDHLLVEEAIPKLVDATTNRLLTMLPTKEEVKNAVFDLN 190



 Score = 29.6 bits (65), Expect(3) = 2e-11
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 985  GADGFNGPFFQTCWDIIAPDVYQVV 1059
            G D F   FFQ  W+I+  DVY+ V
Sbjct: 196  GPDVFGACFFQIYWNIVKKDVYEAV 220


>emb|CAN66945.1| hypothetical protein VITISV_020092 [Vitis vinifera]
          Length = 894

 Score = 68.9 bits (167), Expect(2) = 3e-11
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
 Frame = +3

Query: 342 PGQVQNMWIKHDNFMNVVTNNW-RLPMGGDAMSILWHKLKRLKGCLKQWNKEEFGNIFSV 518
           P + +NMW+K + F +++   W  + + G A   L  KLK +K  LK WNKE FGN+   
Sbjct: 225 PFRFENMWLKVEGFQDMIRRWWWEIEVRGSASYRLATKLKEIKQKLKXWNKEVFGNLGCN 284

Query: 519 VAQAEDQVLHCEQV-LENSNTPADIEAFNNARANHLRCLALEEEYWSQLSGIKWFEFGGQ 695
            A A  QV   ++V  E   +  + E  N A+ N+ + + LEE +W QLS   W   G +
Sbjct: 285 KAAALQQVEFWDRVESERILSMEETELKNEAKVNYQKWVLLEETHWRQLSREIWLREGDR 344

Query: 696 VNSLFLLLCQEEGKEEHYHR 755
               F  +     +  +  R
Sbjct: 345 NTGYFHRIANANRRNNYLDR 364



 Score = 26.2 bits (56), Expect(2) = 3e-11
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +2

Query: 200 GMILWSALTIVNLKMLGILGQSFKRMDRLLMNASCANRFVVMGVKHLARTGSEH 361
           G+  WS          G   QS+ R+DR L+N S  ++F  +    L R  S+H
Sbjct: 165 GVFTWSG---------GPNNQSWARLDRFLVNTSWLDQFSSVLQSRLPRPLSDH 209


>emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera]
          Length = 1937

 Score = 65.5 bits (158), Expect(3) = 3e-11
 Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
 Frame = +3

Query: 342  PGQVQNMWIKHDNFMNVVTNNWR-LPMGGDAMSILWHKLKRLKGCLKQWNKEEFGNIFSV 518
            P + +NMW+K D F ++V   W    + G +   +  KLK LK  LK WNKE  GN+   
Sbjct: 1002 PFRFENMWLKLDGFKDLVRCWWNGYSVEGYSSHCIAEKLKALKKDLKNWNKEVVGNVSFN 1061

Query: 519  VAQAEDQVLHCE-QVLENSNTPADIEAFNNARANHLRCLALEEEYWSQLSGIKWFEFGGQ 695
             A+A  ++   E +  E+  TP D+EA N A  ++ +   LEE  W Q S   W + G +
Sbjct: 1062 RAEAFSRLQRWEAKENESPLTPGDVEAKNRALEDYKKWALLEETSWRQKSREIWLKEGDK 1121

Query: 696  VNSLF 710
                F
Sbjct: 1122 NTKYF 1126



 Score = 26.9 bits (58), Expect(3) = 3e-11
 Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
 Frame = +1

Query: 124  PWMVMGDFNTVAAPTEQLGC-KPQRGRNDFVECIDHCKLEDAGYIGSVF 267
            PW + GDFN V  P E+    +       F E I    L D    G  F
Sbjct: 896  PWCIRGDFNAVRFPEERRNALRLTTEMRRFTEVIGELGLRDFPLAGGPF 944



 Score = 21.9 bits (45), Expect(3) = 3e-11
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 248  GILGQSFKRMDRLLMNASCANRFVVMGVKHLARTGSEH 361
            G+  Q+  R+DR L++    + F  +    L R  S+H
Sbjct: 949  GLNSQAASRLDRFLISDPWEDHFSAITQSALPRLVSDH 986


>emb|CAN63923.1| hypothetical protein VITISV_004023 [Vitis vinifera]
          Length = 1081

 Score = 69.7 bits (169), Expect(2) = 4e-11
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
 Frame = +3

Query: 303  VLIDLLLWVSSILPGQVQNMWIKHDNFMNVVTNNWR-LPMGGDAMSILWHKLKRLKGCLK 479
            VL++   W     P + +NMW K + F +++ N W+   + G A   L  KLK++K  LK
Sbjct: 632  VLLEGGSWRRGPAPFRFENMWFKVEGFKDLIRNWWQGTEVRGSASFRLSEKLKKVKQKLK 691

Query: 480  QWNKEEFGNIFSVVAQAEDQVLHCEQVL-ENSNTPADIEAFNNARANHLRCLALEEEYWS 656
             WN+EEFGN+ S    A  QV + ++V  E S +  +      A+  + + + LEE +W 
Sbjct: 692  VWNREEFGNLESNKEAAIQQVEYWDRVEDERSLSMEESACKKEAKEVYAKWVELEETHWR 751

Query: 657  QLSGIKWFEFGGQVNSLFLLLCQEEGKEEHYHR 755
            Q+S   W + G +    F  +     +  H  R
Sbjct: 752  QVSRELWLKAGDRNTRYFHRMASAHRRVNHMDR 784



 Score = 25.0 bits (53), Expect(2) = 4e-11
 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
 Frame = +1

Query: 124 PWMVMGDFNTVAAPTEQLGCKPQRGR-----NDFVECIDHCKLEDAGYIGSVFQENG 279
           PW + GDFN   A  E    + ++GR       F E +D   L D    G  F   G
Sbjct: 539 PWCLGGDFNITLAQGE----RNRQGRISSAMRRFAEVVDDLGLVDLQLQGGAFTWTG 591


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