BLASTX nr result

ID: Lithospermum22_contig00027413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027413
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187269.1| ribosomal protein L34e-like protein [Arabidopsi...   166   4e-39
ref|XP_002882453.1| hypothetical protein ARALYDRAFT_896728 [Arab...   164   1e-38
ref|XP_004169520.1| PREDICTED: uncharacterized protein At5g19025...   159   8e-37
ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containi...   159   8e-37
ref|XP_004169519.1| PREDICTED: uncharacterized protein At5g19025...   157   3e-36

>ref|NP_187269.1| ribosomal protein L34e-like protein [Arabidopsis thaliana]
           gi|6862922|gb|AAF30311.1|AC018907_11 unknown protein
           [Arabidopsis thaliana] gi|62867643|gb|AAY17425.1|
           At3g06180 [Arabidopsis thaliana]
           gi|90962960|gb|ABE02404.1| At3g06180 [Arabidopsis
           thaliana] gi|332640836|gb|AEE74357.1| ribosomal protein
           L34e-like protein [Arabidopsis thaliana]
          Length = 241

 Score =  166 bits (421), Expect = 4e-39
 Identities = 106/250 (42%), Positives = 129/250 (51%), Gaps = 8/250 (3%)
 Frame = +2

Query: 23  CKHSSPSATTXXXXXXXXXXXXXXXXXXTSYCSYIIHSFSLL---LPSITSFLAN----- 178
           CKHS PSAT                   +SY SY+ HSFSLL    PS++S + +     
Sbjct: 45  CKHS-PSATLDLLILILVLFSGAFLL--SSYFSYLFHSFSLLSSHFPSLSSLIFSDDEDL 101

Query: 179 SFNPNHLYYVVFSVSFVTILTFFEICCIPRSRKCGKIKCKGLRKCMEFDLQLIKEGSLRS 358
           S  P   Y+  F+V F   + F ++CC PRSRKC   KCKGL+K MEFDLQ         
Sbjct: 102 SSIPPASYFFAFAVFFAASIAFLDLCCGPRSRKCRNPKCKGLKKAMEFDLQ--------- 152

Query: 359 NEYNNGEKRKISSKNGLKDGSLRVNECSNGEKRKNSVKNGVKEGSLRVSECKGGEKSKDG 538
                                L+  EC         VK+G                    
Sbjct: 153 ---------------------LQTEEC---------VKSG-------------------- 162

Query: 539 EWSVEEIDELPWKGGSESNPDYECLRAELRKMAPPNGKAVLLFRAKCGCPLAKLEGWGTG 718
             + +EID LPWKGGSESNPDYECLRAELR+MAPPNG+AVLLFR++CGCP+AKLEGWG  
Sbjct: 163 --ATKEIDRLPWKGGSESNPDYECLRAELRRMAPPNGRAVLLFRSRCGCPVAKLEGWG-- 218

Query: 719 AKQRGKRLKK 748
             +RG+R KK
Sbjct: 219 -PKRGRRHKK 227


>ref|XP_002882453.1| hypothetical protein ARALYDRAFT_896728 [Arabidopsis lyrata subsp.
           lyrata] gi|297328293|gb|EFH58712.1| hypothetical protein
           ARALYDRAFT_896728 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  164 bits (416), Expect = 1e-38
 Identities = 104/250 (41%), Positives = 128/250 (51%), Gaps = 8/250 (3%)
 Frame = +2

Query: 23  CKHSSPSATTXXXXXXXXXXXXXXXXXXTSYCSYIIHSFSLL---LPSITSFLANSFN-- 187
           CKHS PSAT                   +SY SY+ HSFSLL    PS++S + +     
Sbjct: 23  CKHS-PSATLDLLILILVLFSGAFLL--SSYFSYLFHSFSLLSSHFPSLSSLIFSDDEDL 79

Query: 188 ---PNHLYYVVFSVSFVTILTFFEICCIPRSRKCGKIKCKGLRKCMEFDLQLIKEGSLRS 358
              P   Y+  F+V F   + F ++CC PRSRKC   KCKGL+K MEFDLQ         
Sbjct: 80  SPIPPASYFFAFAVFFAASIAFLDLCCGPRSRKCKNPKCKGLKKAMEFDLQ--------- 130

Query: 359 NEYNNGEKRKISSKNGLKDGSLRVNECSNGEKRKNSVKNGVKEGSLRVSECKGGEKSKDG 538
                                L+  EC         VK+G                    
Sbjct: 131 ---------------------LQTEEC---------VKSG-------------------- 140

Query: 539 EWSVEEIDELPWKGGSESNPDYECLRAELRKMAPPNGKAVLLFRAKCGCPLAKLEGWGTG 718
             + +EID LPWKGGSESNPDYECLRAELR+MAPPNG+AVLLFR++CGCP+AKL+GWG  
Sbjct: 141 --ATKEIDRLPWKGGSESNPDYECLRAELRRMAPPNGRAVLLFRSRCGCPVAKLQGWG-- 196

Query: 719 AKQRGKRLKK 748
             +RG+R KK
Sbjct: 197 -PKRGRRHKK 205


>ref|XP_004169520.1| PREDICTED: uncharacterized protein At5g19025-like isoform 3
           [Cucumis sativus]
          Length = 224

 Score =  159 bits (401), Expect = 8e-37
 Identities = 107/252 (42%), Positives = 124/252 (49%), Gaps = 4/252 (1%)
 Frame = +2

Query: 5   PPNSPNCKHSSPSATTXXXXXXXXXXXXXXXXXXTSYCSYIIHSFSLLL----PSITSFL 172
           P NS  CKHS PSAT                   TSY SYI +S S+LL    P +  F 
Sbjct: 34  PSNSLLCKHS-PSATLDLLILILVLFSGTFLV--TSYFSYIFNSLSILLSHSAPQLPQF- 89

Query: 173 ANSFNPNHLYYVVFSVSFVTILTFFEICCIPRSRKCGKIKCKGLRKCMEFDLQLIKEGSL 352
                    +   F + F   +  FEICC  RSRKC K  CKGL+K MEFDLQL      
Sbjct: 90  ------PFTFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQL------ 137

Query: 353 RSNEYNNGEKRKISSKNGLKDGSLRVNECSNGEKRKNSVKNGVKEGSLRVSECKGGEKSK 532
                                   +  EC             VK GS             
Sbjct: 138 ------------------------QTEEC-------------VKSGS------------- 147

Query: 533 DGEWSVEEIDELPWKGGSESNPDYECLRAELRKMAPPNGKAVLLFRAKCGCPLAKLEGWG 712
                 +EID+LPWKGGSE+NPDYECLR+ELRKMAPPNG+AVLLFRA+CGCP+AKLEGWG
Sbjct: 148 ------KEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWG 201

Query: 713 TGAKQRGKRLKK 748
           T   +RG+R KK
Sbjct: 202 T---KRGRRHKK 210


>ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Cucumis sativus]
          Length = 874

 Score =  159 bits (401), Expect = 8e-37
 Identities = 107/252 (42%), Positives = 124/252 (49%), Gaps = 4/252 (1%)
 Frame = +2

Query: 5   PPNSPNCKHSSPSATTXXXXXXXXXXXXXXXXXXTSYCSYIIHSFSLLL----PSITSFL 172
           P NS  CKHS PSAT                   TSY SYI +S S+LL    P +  F 
Sbjct: 34  PSNSLLCKHS-PSATLDLLILILVLFSGTFLV--TSYFSYIFNSLSILLSHSAPQLPQF- 89

Query: 173 ANSFNPNHLYYVVFSVSFVTILTFFEICCIPRSRKCGKIKCKGLRKCMEFDLQLIKEGSL 352
                    +   F + F   +  FEICC  RSRKC K  CKGL+K MEFDLQL      
Sbjct: 90  ------PFTFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQL------ 137

Query: 353 RSNEYNNGEKRKISSKNGLKDGSLRVNECSNGEKRKNSVKNGVKEGSLRVSECKGGEKSK 532
                                   +  EC             VK GS             
Sbjct: 138 ------------------------QTEEC-------------VKSGS------------- 147

Query: 533 DGEWSVEEIDELPWKGGSESNPDYECLRAELRKMAPPNGKAVLLFRAKCGCPLAKLEGWG 712
                 +EID+LPWKGGSE+NPDYECLR+ELRKMAPPNG+AVLLFRA+CGCP+AKLEGWG
Sbjct: 148 ------KEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWG 201

Query: 713 TGAKQRGKRLKK 748
           T   +RG+R KK
Sbjct: 202 T---KRGRRHKK 210


>ref|XP_004169519.1| PREDICTED: uncharacterized protein At5g19025-like isoform 2
           [Cucumis sativus]
          Length = 226

 Score =  157 bits (396), Expect = 3e-36
 Identities = 106/251 (42%), Positives = 123/251 (49%), Gaps = 4/251 (1%)
 Frame = +2

Query: 5   PPNSPNCKHSSPSATTXXXXXXXXXXXXXXXXXXTSYCSYIIHSFSLLL----PSITSFL 172
           P NS  CKHS PSAT                   TSY SYI +S S+LL    P +  F 
Sbjct: 34  PSNSLLCKHS-PSATLDLLILILVLFSGTFLV--TSYFSYIFNSLSILLSHSAPQLPQF- 89

Query: 173 ANSFNPNHLYYVVFSVSFVTILTFFEICCIPRSRKCGKIKCKGLRKCMEFDLQLIKEGSL 352
                    +   F + F   +  FEICC  RSRKC K  CKGL+K MEFDLQL      
Sbjct: 90  ------PFTFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQL------ 137

Query: 353 RSNEYNNGEKRKISSKNGLKDGSLRVNECSNGEKRKNSVKNGVKEGSLRVSECKGGEKSK 532
                                   +  EC             VK GS             
Sbjct: 138 ------------------------QTEEC-------------VKSGS------------- 147

Query: 533 DGEWSVEEIDELPWKGGSESNPDYECLRAELRKMAPPNGKAVLLFRAKCGCPLAKLEGWG 712
                 +EID+LPWKGGSE+NPDYECLR+ELRKMAPPNG+AVLLFRA+CGCP+AKLEGWG
Sbjct: 148 ------KEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWG 201

Query: 713 TGAKQRGKRLK 745
           T   +RG+R K
Sbjct: 202 T---KRGRRHK 209


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