BLASTX nr result

ID: Lithospermum22_contig00027382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027382
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...   125   6e-27
gb|AAG51228.1|AC035249_3 Tam3-like transposon protein; 93317-954...   123   2e-26
ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu...   122   4e-26
gb|ACL53668.1| unknown [Zea mays] gi|223975301|gb|ACN31838.1| un...   115   4e-24
ref|XP_003592705.1| HAT family dimerization domain containing pr...   113   2e-23

>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score =  125 bits (313), Expect = 6e-27
 Identities = 69/168 (41%), Positives = 97/168 (57%), Gaps = 2/168 (1%)
 Frame = +1

Query: 37   RIYCKKGVCLDVETRWNSTYLMLECAIKYRKAFERLRREDSSYVLYFSSARIGSPTSVDW 216
            RI  K  V  D  TRWNSTYLMLE A+K++KAF+RL  +   Y +       G P +VDW
Sbjct: 1263 RIQDKSTVQYDCPTRWNSTYLMLESALKFQKAFKRLGEKCVEYAMLEG----GVPNNVDW 1318

Query: 217  VKVDALVKFLELFYEATLVFSGSKHTTASTYFTQVVDLYMTIKLYQ--IDSDIVLSNMAN 390
                  VKFL+LF+E T   SGS + T+STYF +   +      +      D +L+NMA 
Sbjct: 1319 DNAKCFVKFLKLFFEITKKVSGSTYVTSSTYFMEHCKILGGFNAWMGCHKDDPILANMAT 1378

Query: 391  NMRAKFEKYWVDSELGNNLLFLGVIFYPRQKFNKVSFCYEQMYSEDLS 534
             M AK+ KYW D    N L+F+ VIFYPR+KF  +++   + Y ++++
Sbjct: 1379 KMTAKYSKYWGDVAKMNMLVFIAVIFYPRRKFQFINWGLNKYYEKEVA 1426


>gb|AAG51228.1|AC035249_3 Tam3-like transposon protein; 93317-95488 [Arabidopsis thaliana]
           gi|12323055|gb|AAG51515.1|AC068324_3 hAT-element
           transposase, putative [Arabidopsis thaliana]
          Length = 723

 Score =  123 bits (308), Expect = 2e-26
 Identities = 67/162 (41%), Positives = 92/162 (56%), Gaps = 5/162 (3%)
 Frame = +1

Query: 64  LDVETRWNSTYLMLECAIKYRKAFERLRREDSSYVLYF-----SSARIGSPTSVDWVKVD 228
           LDV+TRWNSTYLML  AIK++ AF+++  ED  Y  +F        RIG PT++DW +V+
Sbjct: 359 LDVKTRWNSTYLMLTRAIKFKVAFDKMEAEDKLYNDHFLEVVDGEKRIGPPTTIDWREVE 418

Query: 229 ALVKFLELFYEATLVFSGSKHTTASTYFTQVVDLYMTIKLYQIDSDIVLSNMANNMRAKF 408
            LVKFL LFY ATLV S S    +   + ++V +   +       D  L   A  MR KF
Sbjct: 419 RLVKFLGLFYTATLVVSASSIVCSYKCYGEIVTIEKNLLGMTHSYDKELREKAVEMREKF 478

Query: 409 EKYWVDSELGNNLLFLGVIFYPRQKFNKVSFCYEQMYSEDLS 534
           +KYW   +  N +L +  +F PRQK      C+E++Y  D S
Sbjct: 479 DKYWDGQKNINRMLIIASVFDPRQKMEFAKMCFEKLYGVDTS 520


>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
           gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
           [Medicago truncatula]
          Length = 1001

 Score =  122 bits (306), Expect = 4e-26
 Identities = 60/160 (37%), Positives = 94/160 (58%)
 Frame = +1

Query: 49  KKGVCLDVETRWNSTYLMLECAIKYRKAFERLRREDSSYVLYFSSARIGSPTSVDWVKVD 228
           K  VCLDVETRWN+TYLM   A+K+ K FE L   D  YV   ++   G PT  DW +V 
Sbjct: 346 KSSVCLDVETRWNTTYLMAAAALKHEKTFEELCFLDQKYVNELTTKGKGVPTQDDWKRVR 405

Query: 229 ALVKFLELFYEATLVFSGSKHTTASTYFTQVVDLYMTIKLYQIDSDIVLSNMANNMRAKF 408
            ++ FL++FY+AT+  SGS + T++ Y  +++ +   I       D+ L +MA  M+ K+
Sbjct: 406 EILPFLKMFYDATVRISGSSYLTSNIYMFEILGIGKRIVEMCSSEDVHLRSMAQRMKLKY 465

Query: 409 EKYWVDSELGNNLLFLGVIFYPRQKFNKVSFCYEQMYSED 528
           +KYW + +  N +L + ++F PR+K     +   + Y+ED
Sbjct: 466 DKYWGNYKSLNMMLLVALVFDPRRKVRLADWMIRRFYNED 505


>gb|ACL53668.1| unknown [Zea mays] gi|223975301|gb|ACN31838.1| unknown [Zea mays]
          Length = 590

 Score =  115 bits (289), Expect = 4e-24
 Identities = 61/160 (38%), Positives = 92/160 (57%)
 Frame = +1

Query: 49  KKGVCLDVETRWNSTYLMLECAIKYRKAFERLRREDSSYVLYFSSARIGSPTSVDWVKVD 228
           KK + LDV TRWNSTY+M+  AI Y+ AF+RL ++D     + +      P+S DW+   
Sbjct: 251 KKTLSLDVATRWNSTYIMIRDAIYYKNAFDRLAKKDKDKYGHIN------PSSTDWLNAT 304

Query: 229 ALVKFLELFYEATLVFSGSKHTTASTYFTQVVDLYMTIKLYQIDSDIVLSNMANNMRAKF 408
            + K L+ FY+ TL+FSG+ + TA+ +F +  ++ M I  +   SD+V+  MA +MR KF
Sbjct: 305 NISKCLKKFYDVTLLFSGTSYPTANHFFRKFSEIKMAIARWCDSSDLVICTMAFSMRHKF 364

Query: 409 EKYWVDSELGNNLLFLGVIFYPRQKFNKVSFCYEQMYSED 528
           +KYW   E+ N  L +G    PR K   +     +MY  D
Sbjct: 365 DKYW---EMNNLALAVGAFLDPRYKHRMIELYMSKMYGSD 401


>ref|XP_003592705.1| HAT family dimerization domain containing protein [Medicago
           truncatula] gi|358345320|ref|XP_003636729.1| HAT family
           dimerization domain containing protein [Medicago
           truncatula] gi|355481753|gb|AES62956.1| HAT family
           dimerization domain containing protein [Medicago
           truncatula] gi|355502664|gb|AES83867.1| HAT family
           dimerization domain containing protein [Medicago
           truncatula]
          Length = 576

 Score =  113 bits (283), Expect = 2e-23
 Identities = 67/168 (39%), Positives = 96/168 (57%), Gaps = 7/168 (4%)
 Frame = +1

Query: 55  GVC------LDVETRWNSTYLMLECAIKYRKAFERLRREDSSYVLYFSSARIGSPTSVDW 216
           GVC      LDV TRWNSTYLML  A KY+  F RL   D ++V        G P   DW
Sbjct: 286 GVCSKAMLTLDVVTRWNSTYLMLNIAEKYKHVFYRLEHADDAFVTSLGGELGGYPDHDDW 345

Query: 217 VKVDALVKFLELFYEATLVFSGSKHTTASTYFTQVVDLYMTIKLYQID-SDIVLSNMANN 393
            +    VKFL+ FY+AT  FSGS   TA+++F Q+++++ T+  ++ + +D +L  M  N
Sbjct: 346 ERSRVFVKFLKTFYDATPSFSGSLIVTANSFFKQLMEIHKTLNKWRHNVTDPILKTMTAN 405

Query: 394 MRAKFEKYWVDSELGNNLLFLGVIFYPRQKFNKVSFCYEQMYSEDLSS 537
           M+ KF+KYW +S+  N LLF+ +   PR K  +    YE ++   L S
Sbjct: 406 MQLKFDKYW-ESDAINYLLFVAIYLDPRYKLFE---HYEALHPVSLES 449


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