BLASTX nr result

ID: Lithospermum22_contig00027377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027377
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_002528356.1| pentatricopeptide repeat-containing protein,...   124   6e-27
ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...   120   2e-25
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24

>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/95 (63%), Positives = 77/95 (81%)
 Frame = +2

Query: 2   FDEISERDSVCYSSMVVGMAQNGKPVEALSYFVEMRRGGFASTMYSVSGAFKAVSEMATL 181
           FDEI+ERD VC+++M+VG+AQN +PV+AL  F EM+     STMYSVSGA +A SE+A L
Sbjct: 169 FDEITERDEVCFAAMIVGLAQNARPVDALLVFGEMKACNVGSTMYSVSGALRAASELAAL 228

Query: 182 EQCRIIHGHSVVIGMDLDVVVGTSLIDGYGKCGLV 286
           EQCRIIHGH+V  G D +++VGT+L+DGYGK GLV
Sbjct: 229 EQCRIIHGHAVSTGFDSNLIVGTALVDGYGKAGLV 263


>ref|XP_002528356.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532224|gb|EEF34028.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 356

 Score =  124 bits (312), Expect = 6e-27
 Identities = 55/95 (57%), Positives = 77/95 (81%)
 Frame = +2

Query: 2   FDEISERDSVCYSSMVVGMAQNGKPVEALSYFVEMRRGGFASTMYSVSGAFKAVSEMATL 181
           FDE+ ERD VCY +++VG+AQN + ++ALS F EM+    +ST+YSVSGA +A + MA L
Sbjct: 150 FDEMPERDEVCYGALIVGLAQNSRAIDALSVFNEMKFCNVSSTVYSVSGALRAAAAMAAL 209

Query: 182 EQCRIIHGHSVVIGMDLDVVVGTSLIDGYGKCGLV 286
           EQCR+IHGH+VV G+D +V++G+SLIDGYGK G++
Sbjct: 210 EQCRVIHGHAVVSGLDRNVIIGSSLIDGYGKAGVI 244


>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/95 (57%), Positives = 75/95 (78%)
 Frame = +2

Query: 2   FDEISERDSVCYSSMVVGMAQNGKPVEALSYFVEMRRGGFASTMYSVSGAFKAVSEMATL 181
           FDEIS RD  CYS++VVG+AQN + + ALS F +M+    AST+YSVSGA +A +++A L
Sbjct: 165 FDEISYRDEFCYSALVVGLAQNAQSIRALSMFRQMKASEVASTIYSVSGALRAAADLAAL 224

Query: 182 EQCRIIHGHSVVIGMDLDVVVGTSLIDGYGKCGLV 286
           E+CR+IH H+VV G+D +V+V T+LIDGYGK GL+
Sbjct: 225 ERCRVIHSHAVVTGLDTNVIVQTALIDGYGKSGLI 259


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  120 bits (300), Expect = 2e-25
 Identities = 53/95 (55%), Positives = 78/95 (82%)
 Frame = +2

Query: 2   FDEISERDSVCYSSMVVGMAQNGKPVEALSYFVEMRRGGFASTMYSVSGAFKAVSEMATL 181
           FDEI + D+VC+S+++V +AQN + V+A S F EMR  GFAST++SVSG  +A +++A L
Sbjct: 156 FDEIPQPDNVCFSALIVALAQNSRSVDASSVFSEMRGRGFASTVHSVSGVLRAAAQLAAL 215

Query: 182 EQCRIIHGHSVVIGMDLDVVVGTSLIDGYGKCGLV 286
           EQCR++H H+VV+G+D +VVVG++L+DGYGK G+V
Sbjct: 216 EQCRMMHAHAVVLGLDSNVVVGSALVDGYGKAGVV 250


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  116 bits (291), Expect = 2e-24
 Identities = 50/95 (52%), Positives = 77/95 (81%)
 Frame = +2

Query: 2   FDEISERDSVCYSSMVVGMAQNGKPVEALSYFVEMRRGGFASTMYSVSGAFKAVSEMATL 181
           FDEI + D+VC+S++VV +AQN + V+ALS F +MR  GFAST++ VSG  +A +++A L
Sbjct: 156 FDEIPQPDNVCFSALVVALAQNSRSVDALSVFSDMRCRGFASTVHGVSGGLRAAAQLAAL 215

Query: 182 EQCRIIHGHSVVIGMDLDVVVGTSLIDGYGKCGLV 286
           EQCR++H H+++ G+D +VVVG++++DGYGK G+V
Sbjct: 216 EQCRMMHAHAIIAGLDSNVVVGSAVVDGYGKAGVV 250


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