BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027353
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...   462   e-128
ref|XP_002520317.1| pentatricopeptide repeat-containing protein,...   455   e-125
ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containi...   449   e-124
ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containi...   446   e-123
ref|XP_002307458.1| predicted protein [Populus trichocarpa] gi|2...   446   e-123

>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  462 bits (1190), Expect = e-128
 Identities = 223/294 (75%), Positives = 256/294 (87%)
 Frame = -2

Query: 1265 EIFDAMKHQFVQDSKTYSILLEGWGRAPNLPKARELFREMERAGCEPDIVTYGIMVDTLC 1086
            EIF+ MK QF+ DSKTYSILLEGWG+APNLPKARE+FREM   GC+PDIVTYGIMVD LC
Sbjct: 167  EIFNGMKDQFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILC 226

Query: 1085 KACRVEEAVDIIKEMTCRGIWPTSFIYSVLIHTYGLDNRIEDAIETFLEMERNGVEADVA 906
            KA RV+EAV I+KEM      PTSFIYSVL+HTYG++NRIEDA+ TFL+MERN +EADVA
Sbjct: 227  KAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVA 286

Query: 905  AYNALISAFCKVNRLQNVYRVLNEMHSKQVKPNSRTCNIILGSLISREDTDEAFKVFRKM 726
             YNALI AFCKVN+L+N YRVLNEM  K ++PNSRTCNIIL SLIS  DTDEAF+VFR+M
Sbjct: 287  VYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRM 346

Query: 725  IHICEPDADTYTMMIKMFCGRDDLEMALKVWKYMKIKQFVPSMHTFSVLIEGLCGKGDVS 546
            I +C+PDADTYTMMIKMFC  D LEMALKVWKYM++KQFVPSMHTFSVLI GLC KG+ S
Sbjct: 347  IKVCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNAS 406

Query: 545  EACVLMEEMLERGIRPGRHTFGKLRQLLLKEGRQDVLEFLSKKMNLLVKEPLWD 384
            +AC+L+EEM+E+GIRP   TFGKL+QLL+KEGR+DVLEFL +KMNLLVKEPL D
Sbjct: 407  KACILLEEMIEKGIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLLVKEPLCD 460



 Score = 80.9 bits (198), Expect = 6e-13
 Identities = 49/183 (26%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
 Frame = -2

Query: 1121 IVTYGIMVDTLCKACRVEEAVDIIKEMTCRGIWPTSFIYSVLIHTYGLDNRIEDAIETFL 942
            I  Y  M+++L K  + +   D++ +M    I      + +++  Y    ++++A+ TF 
Sbjct: 77   IRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVE-TFCIIMRKYARSQKVKEAVYTFN 135

Query: 941  EMERNGVEADVAAYNALISAFCKVNRLQNVYRVLNEMHSKQVKPNSRTCNIILGSLISRE 762
             ME+  V  ++AA+N+L+SA CK   +     + N M   Q  P+S+T +I+L       
Sbjct: 136  IMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGM-KDQFIPDSKTYSILLEGWGKAP 194

Query: 761  DTDEAFKVFRKMIHI-CEPDADTYTMMIKMFCGRDDLEMALKVWKYMKIKQFVPSMHTFS 585
            +  +A ++FR+M+ + C+PD  TY +M+ + C    ++ A+ + K M      P+   +S
Sbjct: 195  NLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYS 254

Query: 584  VLI 576
            VL+
Sbjct: 255  VLV 257


>ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540536|gb|EEF42103.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 439

 Score =  455 bits (1171), Expect = e-125
 Identities = 218/294 (74%), Positives = 257/294 (87%)
 Frame = -2

Query: 1265 EIFDAMKHQFVQDSKTYSILLEGWGRAPNLPKARELFREMERAGCEPDIVTYGIMVDTLC 1086
            EIFD+ K +FV DSKTY+ILLEGWG+ PNLPKARE+FREM   GC PDIVTYGIMVD LC
Sbjct: 146  EIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILC 205

Query: 1085 KACRVEEAVDIIKEMTCRGIWPTSFIYSVLIHTYGLDNRIEDAIETFLEMERNGVEADVA 906
            KA RV+EA+DI+KEM      PTSFIYSVLIHTYG++NRIEDA++TFL ME+NGV+ADVA
Sbjct: 206  KAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVA 265

Query: 905  AYNALISAFCKVNRLQNVYRVLNEMHSKQVKPNSRTCNIILGSLISREDTDEAFKVFRKM 726
            AYNALI AFCKVN+ +NVYRVLNEM  K ++PNSRT NIIL +LI+R +TDEAF+VFR+M
Sbjct: 266  AYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRM 325

Query: 725  IHICEPDADTYTMMIKMFCGRDDLEMALKVWKYMKIKQFVPSMHTFSVLIEGLCGKGDVS 546
            I +CEPDADTYTMMIKMFC R++LEMALKVWKYMK K FVPSMHTFSVLI GLC +GDVS
Sbjct: 326  IKVCEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVS 385

Query: 545  EACVLMEEMLERGIRPGRHTFGKLRQLLLKEGRQDVLEFLSKKMNLLVKEPLWD 384
             ACV++E+M+E+GIRP   TFG+LR LL+KEGR+DVLEFL +K+N+L+KEPLWD
Sbjct: 386  HACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGREDVLEFLQQKINVLIKEPLWD 439



 Score = 80.9 bits (198), Expect = 6e-13
 Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 1/205 (0%)
 Frame = -2

Query: 1112 YGIMVDTLCKACRVEEAVDIIKEMTCRGIWPTSFIYSVLIHTYGLDNRIEDAIETFLEME 933
            Y  M+++L K  + +   D+I  M  + +      + +++  Y    ++E+A+ TF  ME
Sbjct: 59   YHTMIESLAKIRQYQIMWDLINAMKRKRMLNVE-TFCIIMRKYARAQKLEEAVYTFNVME 117

Query: 932  RNGVEADVAAYNALISAFCKVNRLQNVYRVLNEMHSKQVKPNSRTCNIILGSLISREDTD 753
            +  V  ++AA+N L SA CK   ++    + +    + V P+S+T  I+L       +  
Sbjct: 118  KYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRFV-PDSKTYTILLEGWGKTPNLP 176

Query: 752  EAFKVFRKMIHI-CEPDADTYTMMIKMFCGRDDLEMALKVWKYMKIKQFVPSMHTFSVLI 576
            +A ++FR+M+ + C PD  TY +M+ + C    ++ AL + K M +    P+   +SVLI
Sbjct: 177  KAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLI 236

Query: 575  EGLCGKGDVSEACVLMEEMLERGIR 501
                 +  + +A      M + G++
Sbjct: 237  HTYGIENRIEDAVDTFLGMEKNGVK 261


>ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Cucumis sativus]
            gi|449499065|ref|XP_004160711.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Cucumis sativus]
          Length = 439

 Score =  449 bits (1154), Expect = e-124
 Identities = 216/294 (73%), Positives = 253/294 (86%)
 Frame = -2

Query: 1265 EIFDAMKHQFVQDSKTYSILLEGWGRAPNLPKARELFREMERAGCEPDIVTYGIMVDTLC 1086
            EIFD MK QFV DSKTYSIL+EGWGRAPNLPKARE++REM  +GC PD VTY IMVD LC
Sbjct: 146  EIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLC 205

Query: 1085 KACRVEEAVDIIKEMTCRGIWPTSFIYSVLIHTYGLDNRIEDAIETFLEMERNGVEADVA 906
            KA RV+EAV+I+KEM      P+SFIYSVL+HTYG++NRIEDA+ TFLEMERNGV ADVA
Sbjct: 206  KAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVA 265

Query: 905  AYNALISAFCKVNRLQNVYRVLNEMHSKQVKPNSRTCNIILGSLISREDTDEAFKVFRKM 726
            AYNALISAFCK N+++NVYRVL +M  K V PNSRTCNII+ SLI R +TDEAFK+FR+M
Sbjct: 266  AYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRM 325

Query: 725  IHICEPDADTYTMMIKMFCGRDDLEMALKVWKYMKIKQFVPSMHTFSVLIEGLCGKGDVS 546
            I +CEPD D+YTM+IKMFCGR +L+MALK+WKYMK KQFVPSMHTFSVLI GLC  G+ +
Sbjct: 326  IKVCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNAT 385

Query: 545  EACVLMEEMLERGIRPGRHTFGKLRQLLLKEGRQDVLEFLSKKMNLLVKEPLWD 384
            +ACVL+EEM+E+GIRP   TFG+LR LL+KEGR+DVL+FL +KMNLLVKEPL D
Sbjct: 386  QACVLLEEMIEKGIRPSGATFGRLRHLLIKEGRKDVLKFLQEKMNLLVKEPLCD 439



 Score = 87.4 bits (215), Expect = 7e-15
 Identities = 57/236 (24%), Positives = 114/236 (48%), Gaps = 1/236 (0%)
 Frame = -2

Query: 1112 YGIMVDTLCKACRVEEAVDIIKEMTCRGIWPTSFIYSVLIHTYGLDNRIEDAIETFLEME 933
            Y  M+++L K  + +   D++  M  + I      + +++  Y    ++E+A+ TF  ME
Sbjct: 59   YHSMIESLAKIRQYQMVWDLVNAMRNKEILNVE-AFCIIMRKYARAQKVEEAVYTFNVME 117

Query: 932  RNGVEADVAAYNALISAFCKVNRLQNVYRVLNEMHSKQVKPNSRTCNIILGSLISREDTD 753
            +  ++ +VAA+N L+SA CK   ++    + + M   Q  P+S+T +I++       +  
Sbjct: 118  KYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNM-KDQFVPDSKTYSILIEGWGRAPNLP 176

Query: 752  EAFKVFRKMIHI-CEPDADTYTMMIKMFCGRDDLEMALKVWKYMKIKQFVPSMHTFSVLI 576
            +A +++R+MI   C PD  TY++M+ + C    ++ A+++ K M      PS   +SVL+
Sbjct: 177  KAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLV 236

Query: 575  EGLCGKGDVSEACVLMEEMLERGIRPGRHTFGKLRQLLLKEGRQDVLEFLSKKMNL 408
                 +  + +A     EM   G+      +  L     K  +   +  + K M+L
Sbjct: 237  HTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDL 292


>ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Glycine max]
          Length = 461

 Score =  446 bits (1146), Expect = e-123
 Identities = 210/294 (71%), Positives = 255/294 (86%)
 Frame = -2

Query: 1265 EIFDAMKHQFVQDSKTYSILLEGWGRAPNLPKARELFREMERAGCEPDIVTYGIMVDTLC 1086
            EIFDAMK QFV D K+YSILLEGWG+APNLP+ARE+FREM  AGC+PD+VTYGIMVD LC
Sbjct: 168  EIFDAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLC 227

Query: 1085 KACRVEEAVDIIKEMTCRGIWPTSFIYSVLIHTYGLDNRIEDAIETFLEMERNGVEADVA 906
            KA RV+EAV+++KEM      PTSFIYSVL+HTYG+++RIEDAI+TFLEM + G++ADV 
Sbjct: 228  KAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADVV 287

Query: 905  AYNALISAFCKVNRLQNVYRVLNEMHSKQVKPNSRTCNIILGSLISREDTDEAFKVFRKM 726
            AYNALI AFCKVN+ +NV+RVL EM S  V PNSRTCN+I+ S+I +  TD AF+VF +M
Sbjct: 288  AYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRM 347

Query: 725  IHICEPDADTYTMMIKMFCGRDDLEMALKVWKYMKIKQFVPSMHTFSVLIEGLCGKGDVS 546
            I +CEPDADTYTMMIKMFC +++LEMALK+WKYMK KQFVPSMHTFS LI+GLC K + +
Sbjct: 348  IKLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAA 407

Query: 545  EACVLMEEMLERGIRPGRHTFGKLRQLLLKEGRQDVLEFLSKKMNLLVKEPLWD 384
            +ACV+MEEM+E+GIRP R TFG+LRQLL+KEGR+DVL+FL +KMNLLVKEPL+D
Sbjct: 408  KACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNLLVKEPLYD 461



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 55/216 (25%), Positives = 113/216 (52%), Gaps = 1/216 (0%)
 Frame = -2

Query: 1145 ERAGCEPDIVTYGIMVDTLCKACRVEEAVDIIKEMTCRGIWPTSFIYSVLIHTYGLDNRI 966
            ++ G    I  Y +M+++L K  + +   D++  M  +G+      + +++  Y   N++
Sbjct: 70   KQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVE-TFCIMMRKYARANKV 128

Query: 965  EDAIETFLEMERNGVEADVAAYNALISAFCKVNRLQNVYRVLNEMHSKQVKPNSRTCNII 786
            ++A+ TF  M++  V  ++AA+N L+SA CK N ++    + + M   Q  P+ ++ +I+
Sbjct: 129  DEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKG-QFVPDEKSYSIL 187

Query: 785  LGSLISREDTDEAFKVFRKMIHI-CEPDADTYTMMIKMFCGRDDLEMALKVWKYMKIKQF 609
            L       +   A +VFR+M+   C+PD  TY +M+ + C    ++ A++V K M +   
Sbjct: 188  LEGWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNC 247

Query: 608  VPSMHTFSVLIEGLCGKGDVSEACVLMEEMLERGIR 501
             P+   +SVL+     +  + +A     EM ++GI+
Sbjct: 248  RPTSFIYSVLVHTYGVEHRIEDAIDTFLEMAKKGIK 283


>ref|XP_002307458.1| predicted protein [Populus trichocarpa] gi|222856907|gb|EEE94454.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  446 bits (1146), Expect = e-123
 Identities = 213/294 (72%), Positives = 250/294 (85%)
 Frame = -2

Query: 1265 EIFDAMKHQFVQDSKTYSILLEGWGRAPNLPKARELFREMERAGCEPDIVTYGIMVDTLC 1086
            EIFD++K +FV DSKTYSILLEGWG+ PNLPKARE+FREM   GC PDIVTYGIMVD LC
Sbjct: 146  EIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLC 205

Query: 1085 KACRVEEAVDIIKEMTCRGIWPTSFIYSVLIHTYGLDNRIEDAIETFLEMERNGVEADVA 906
            KA RV+EA+ I+ EM      PT FIYSVL+HTYG++NRIEDA+ TFLEME NG+E DVA
Sbjct: 206  KAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVA 265

Query: 905  AYNALISAFCKVNRLQNVYRVLNEMHSKQVKPNSRTCNIILGSLISREDTDEAFKVFRKM 726
             YNALI AFCK NRL+NVYRVLNEM  K V PNSRT NIIL SLI R +TDEA++VF +M
Sbjct: 266  VYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRM 325

Query: 725  IHICEPDADTYTMMIKMFCGRDDLEMALKVWKYMKIKQFVPSMHTFSVLIEGLCGKGDVS 546
            I +CEPDADTYTMMIKMFC RD+L+ ALKVWKYMK+K+F+PSMHTF VLI GLC KGDV+
Sbjct: 326  IKVCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVT 385

Query: 545  EACVLMEEMLERGIRPGRHTFGKLRQLLLKEGRQDVLEFLSKKMNLLVKEPLWD 384
            +ACVL+EEM+E+GIRP   TFG+LRQLL+KEGR+DVL+FL KK+N+LV +PLW+
Sbjct: 386  QACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGREDVLKFLQKKINVLVNDPLWE 439



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 54/226 (23%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
 Frame = -2

Query: 1121 IVTYGIMVDTLCKACRVEEAVDIIKEMTCRGIWPTSFIYSVLIHTYGLDNRIEDAIETFL 942
            +  +  ++D+L K  + +   D++K M  + +      + +++  Y    ++E+A+ TF 
Sbjct: 56   VKAFHTVIDSLAKIRQYQLMWDVVKVMKSKRMVNVE-TFCIIMRKYARAQKVEEAVYTFN 114

Query: 941  EMERNGVEADVAAYNALISAFCKVNRLQNVYRVLNEMHSKQVKPNSRTCNIILGSLISRE 762
             M++  V  ++AA+N L+SA CK   ++    + + +  + V P+S+T +I+L       
Sbjct: 115  IMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFV-PDSKTYSILLEGWGKDP 173

Query: 761  DTDEAFKVFRKMI-HICEPDADTYTMMIKMFCGRDDLEMALKVWKYMKIKQFVPSMHTFS 585
            +  +A ++FR+M+ + C PD  TY +M+ + C    ++ AL +   M      P+   +S
Sbjct: 174  NLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYS 233

Query: 584  VLIEGLCGKGDVSEACVLMEEMLERGIRPGRHTFGKLRQLLLKEGR 447
            VL+     +  + +A     EM   GI P    +  L     K  R
Sbjct: 234  VLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANR 279