BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027325
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854...    60   2e-07
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...    60   2e-07
ref|XP_002316628.1| PAF1 complex component [Populus trichocarpa]...    59   4e-07
ref|XP_002305685.1| PAF1 complex component [Populus trichocarpa]...    58   9e-07
gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indi...    56   1e-06

>ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854406 [Vitis vinifera]
          Length = 493

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/51 (52%), Positives = 37/51 (72%)
 Frame = -1

Query: 155 SKRQAEEDDDDSVGSDLYTGEEDRENLAKMSELERESILAERAEKRSDHKL 3
           S  + +  DD  VGSDLY  E+DR+ LA+++ELERE IL +RA K++D KL
Sbjct: 90  SDHEGDSSDDSDVGSDLYKNEDDRQQLAQLTELEREMILTDRATKKTDKKL 140


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
           gi|223541691|gb|EEF43239.1| RNA polymerase-associated
           protein RTF1, putative [Ricinus communis]
          Length = 660

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/51 (54%), Positives = 35/51 (68%)
 Frame = -1

Query: 155 SKRQAEEDDDDSVGSDLYTGEEDRENLAKMSELERESILAERAEKRSDHKL 3
           S R+ +  D   VG DLY  E+DR  LA+MSELERE IL+ERA+K+ D  L
Sbjct: 92  SDREGDSSDGSDVGEDLYKNEDDRRKLAQMSELEREMILSERADKKGDKNL 142


>ref|XP_002316628.1| PAF1 complex component [Populus trichocarpa]
           gi|222859693|gb|EEE97240.1| PAF1 complex component
           [Populus trichocarpa]
          Length = 664

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = -1

Query: 155 SKRQAEEDDDDSVGSDLYTGEEDRENLAKMSELERESILAERAEKRSDHKL 3
           S R+ E  D   +G DLY  E+DR+ LA+MSEL+RE ILA+RA+K+ D  L
Sbjct: 93  SDREGESSDGSDIGDDLYKDEDDRQKLAQMSELDRELILADRADKKGDKHL 143


>ref|XP_002305685.1| PAF1 complex component [Populus trichocarpa]
           gi|222848649|gb|EEE86196.1| PAF1 complex component
           [Populus trichocarpa]
          Length = 662

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = -1

Query: 164 GRPSKRQAEEDDDDSVGSDLYTGEEDRENLAKMSELERESILAERAEKRSDHKL 3
           G  S R+    D+  +G DLY  E+DR+ LA+MSEL+RE ILA+RA+K+ D  L
Sbjct: 90  GGGSDREGGSSDESDIGDDLYKDEDDRKKLAQMSELDRELILADRADKKGDKHL 143


>gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indica Group]
          Length = 780

 Score = 55.8 bits (133), Expect(2) = 1e-06
 Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
 Frame = -1

Query: 149 RQAEEDDDD--SVGSDLYTGEEDRENLAKMSELERESILAERAEKRSDHKL 3
           R++ +D D   SVGSDLY  E+D+E L KMSEL+RE ILAER  +  D+KL
Sbjct: 230 RRSGDDSDSAPSVGSDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKL 280



 Score = 21.6 bits (44), Expect(2) = 1e-06
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 195 GFGRLASGGGWK 160
           G GR   GGGWK
Sbjct: 201 GGGRGGGGGGWK 212