BLASTX nr result

ID: Lithospermum22_contig00027279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027279
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34510.1| unnamed protein product [Thellungiella halophila]      80   4e-15
gb|AAM61358.1| unknown [Arabidopsis thaliana]                          78   5e-15
ref|NP_196128.1| myb family transcription factor [Arabidopsis th...    78   5e-15
ref|XP_002517275.1| DNA binding protein, putative [Ricinus commu...    84   4e-14
ref|XP_002882695.1| hypothetical protein ARALYDRAFT_897268 [Arab...    75   7e-14

>dbj|BAJ34510.1| unnamed protein product [Thellungiella halophila]
          Length = 270

 Score = 79.7 bits (195), Expect(2) = 4e-15
 Identities = 35/42 (83%), Positives = 41/42 (97%)
 Frame = +1

Query: 541 MREEDSNWFAKWEDELPSPEELMPLSQTLITQDLAIAFDIRN 666
           MREEDSNWFAKWE+ELPSPEEL+P+SQ+LIT DLAIAFD+R+
Sbjct: 1   MREEDSNWFAKWEEELPSPEELIPISQSLITPDLAIAFDLRS 42



 Score = 28.1 bits (61), Expect(2) = 4e-15
 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +3

Query: 750 IAFDIRNSN---NTNQTDIINTVVNSPQANSSAEFDSDMGG 863
           IAFD+R+ N   N N    +     S QANSSAEF +D  G
Sbjct: 36  IAFDLRSPNHRSNGNSGQPLPQTTPS-QANSSAEFAADSAG 75


>gb|AAM61358.1| unknown [Arabidopsis thaliana]
          Length = 266

 Score = 78.2 bits (191), Expect(2) = 5e-15
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +1

Query: 541 MREEDSNWFAKWEDELPSPEELMPLSQTLITQDLAIAFDI 660
           MREEDSNWFAKWE+ELPSPEEL+PLSQ+LIT DLAIAFD+
Sbjct: 1   MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDL 40



 Score = 29.3 bits (64), Expect(2) = 5e-15
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 750 IAFDIRNSNNTNQTDIINTVVNSPQANSSAEFDSDMGG 863
           IAFD+  +NN+N    +      PQ NSSAE   D  G
Sbjct: 36  IAFDLHRNNNSNSGQPL-PQTTPPQPNSSAEIAGDSTG 72


>ref|NP_196128.1| myb family transcription factor [Arabidopsis thaliana]
           gi|10178048|dbj|BAB11531.1| unnamed protein product
           [Arabidopsis thaliana] gi|20260578|gb|AAM13187.1|
           unknown protein [Arabidopsis thaliana]
           gi|30023728|gb|AAP13397.1| At5g05090 [Arabidopsis
           thaliana] gi|332003444|gb|AED90827.1| myb family
           transcription factor [Arabidopsis thaliana]
          Length = 266

 Score = 78.2 bits (191), Expect(2) = 5e-15
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +1

Query: 541 MREEDSNWFAKWEDELPSPEELMPLSQTLITQDLAIAFDI 660
           MREEDSNWFAKWE+ELPSPEEL+PLSQ+LIT DLAIAFD+
Sbjct: 1   MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDL 40



 Score = 29.3 bits (64), Expect(2) = 5e-15
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 750 IAFDIRNSNNTNQTDIINTVVNSPQANSSAEFDSDMGG 863
           IAFD+  +NN+N    +      PQ NSSAE   D  G
Sbjct: 36  IAFDLHRNNNSNSGQPL-PQTTPPQPNSSAEIAGDSTG 72


>ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
           gi|223543538|gb|EEF45068.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 315

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +1

Query: 541 MREEDSNWFAKWEDELPSPEELMPLSQTLITQDLAIAFDIRN 666
           MRE+DSNWF+KWE+ELPSPEELMPLSQTLIT DLAIAFDIRN
Sbjct: 1   MREDDSNWFSKWEEELPSPEELMPLSQTLITPDLAIAFDIRN 42


>ref|XP_002882695.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
           lyrata] gi|297328535|gb|EFH58954.1| hypothetical protein
           ARALYDRAFT_897268 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score = 75.5 bits (184), Expect(2) = 7e-14
 Identities = 32/42 (76%), Positives = 41/42 (97%)
 Frame = +1

Query: 541 MREEDSNWFAKWEDELPSPEELMPLSQTLITQDLAIAFDIRN 666
           MRE+DS+WFA+WE+ELPSPEELMP+SQ+LI+ DLA+AFDIR+
Sbjct: 1   MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRS 42



 Score = 28.1 bits (61), Expect(2) = 7e-14
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 12/47 (25%)
 Frame = +3

Query: 750 IAFDIRNSN----NTNQTDIINTVVNSP--------QANSSAEFDSD 854
           +AFDIR+ N    N+NQ     T   +P        QANSSAEF +D
Sbjct: 36  LAFDIRSPNHGNGNSNQPHHHQTTPPTPSQLQLPSSQANSSAEFAAD 82


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