BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027220
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD37020.1| putative retroelement pol polyprotein [Arabidopsi...   136   2e-30
emb|CAA73042.1| polyprotein [Ananas comosus]                          135   3e-30
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   135   5e-30
gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsi...   135   5e-30
gb|AAD17356.1| contains similarity to retrovirus-related polypro...   135   5e-30

>gb|AAD37020.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 949

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/96 (64%), Positives = 78/96 (81%)
 Frame = -3

Query: 288 IKATDGPEKLAKMYVDQVVRLHGVPESIVSDRDARFTSRFWRGFQEALGTNVQMSTAFHP 109
           I   DG E +A+ Y+D+++RLHG+P SIVSDRD RFTS+FW  FQ+ALGT V +STA+HP
Sbjct: 662 ISDKDGAEIIAEKYIDEIMRLHGIPVSIVSDRDTRFTSKFWNAFQKALGTRVNLSTAYHP 721

Query: 108 QTDGLSERTIQTLEDMLRACVLSFSGSWDEELPKME 1
           QTDG SERTIQTLEDMLRACVL + G+W++ L  +E
Sbjct: 722 QTDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLIE 757


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/89 (68%), Positives = 72/89 (80%)
 Frame = -3

Query: 267 EKLAKMYVDQVVRLHGVPESIVSDRDARFTSRFWRGFQEALGTNVQMSTAFHPQTDGLSE 88
           E+LA++Y+D++VRLHGVP SIVSDRD RF S FWR  Q+ALGT +  STAFHPQ+DG SE
Sbjct: 640 ERLAQVYLDEIVRLHGVPTSIVSDRDTRFVSHFWRSLQDALGTRLDFSTAFHPQSDGQSE 699

Query: 87  RTIQTLEDMLRACVLSFSGSWDEELPKME 1
           RTIQTLEDMLRACV+ F G W + LP  E
Sbjct: 700 RTIQTLEDMLRACVIDFQGGWSQHLPMAE 728


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  135 bits (339), Expect = 5e-30
 Identities = 59/96 (61%), Positives = 77/96 (80%)
 Frame = -3

Query: 288  IKATDGPEKLAKMYVDQVVRLHGVPESIVSDRDARFTSRFWRGFQEALGTNVQMSTAFHP 109
            +K T   E  AK+Y+ ++VRLHGVP SI+SDR A+FT++FW+ FQ+ LG+ V +STAFHP
Sbjct: 1283 VKTTHSAEDYAKLYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGSKVSLSTAFHP 1342

Query: 108  QTDGLSERTIQTLEDMLRACVLSFSGSWDEELPKME 1
            QTDG +ERTIQTLEDMLRACV+ F  +WD+ LP +E
Sbjct: 1343 QTDGQAERTIQTLEDMLRACVIDFKSNWDDHLPLIE 1378


>gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1611

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/96 (64%), Positives = 78/96 (81%)
 Frame = -3

Query: 288  IKATDGPEKLAKMYVDQVVRLHGVPESIVSDRDARFTSRFWRGFQEALGTNVQMSTAFHP 109
            I   DG E +A+ Y+D++VRLHG+P SIVSDRD RFTS+FW+ FQ+ALGT V +STA+HP
Sbjct: 1270 ISDKDGAEIIAEKYIDEIVRLHGIPVSIVSDRDTRFTSKFWKAFQKALGTRVNLSTAYHP 1329

Query: 108  QTDGLSERTIQTLEDMLRACVLSFSGSWDEELPKME 1
            QTD  SERTIQTLEDMLRACVL + G+W++ L  +E
Sbjct: 1330 QTDEQSERTIQTLEDMLRACVLDWGGNWEKYLRLVE 1365


>gb|AAD17356.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] gi|7267381|emb|CAB77942.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 611

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/96 (66%), Positives = 75/96 (78%)
 Frame = -3

Query: 288 IKATDGPEKLAKMYVDQVVRLHGVPESIVSDRDARFTSRFWRGFQEALGTNVQMSTAFHP 109
           I+ TDG   LAK YV ++V+LHGVP SIVSDRD++FTS FWR FQ  +GT VQMSTA+HP
Sbjct: 278 IRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAFQAEMGTKVQMSTAYHP 337

Query: 108 QTDGLSERTIQTLEDMLRACVLSFSGSWDEELPKME 1
           QTDG SERTIQTLEDMLR CVL + G W + L  +E
Sbjct: 338 QTDGQSERTIQTLEDMLRMCVLDWRGHWADHLSLVE 373