BLASTX nr result

ID: Lithospermum22_contig00027103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00027103
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi...   177   6e-43
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   177   1e-42
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   175   3e-42
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              175   3e-42
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   175   3e-42

>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
           gi|449476583|ref|XP_004154777.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  177 bits (450), Expect = 6e-43
 Identities = 80/104 (76%), Positives = 96/104 (92%)
 Frame = +3

Query: 3   GLRKTPGWSSMELDGRIEVFYTANQSHPQCKEIYKELEDLTEKMKSMGYTPDFTFVLQDV 182
           GL+KTPGWSS+E+D +I+VFYT NQ+HP+C+EIY EL +LT KMKS+GY PD+ FVLQDV
Sbjct: 677 GLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDV 736

Query: 183 EDDEKEHILTSHSERLAIAFGILNTLPKTTLRIFKNLRVCGDCH 314
           EDDEKE+ILTSHSERLA+AFGI++T PKTTL+IFKNLRVCGDCH
Sbjct: 737 EDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCH 780


>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 848

 Score =  177 bits (448), Expect = 1e-42
 Identities = 79/104 (75%), Positives = 95/104 (91%)
 Frame = +3

Query: 3    GLRKTPGWSSMELDGRIEVFYTANQSHPQCKEIYKELEDLTEKMKSMGYTPDFTFVLQDV 182
            GL+KTPGWSS+E++ R+++FYT NQSHP+CKEIY EL  LT KMKS+GY PD++FVLQDV
Sbjct: 709  GLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDV 768

Query: 183  EDDEKEHILTSHSERLAIAFGILNTLPKTTLRIFKNLRVCGDCH 314
            E+DEKEHILTSHSERLAIAFGI++T PK+ +RIFKNLRVCGDCH
Sbjct: 769  EEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCH 812


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
            [Vitis vinifera]
          Length = 891

 Score =  175 bits (444), Expect = 3e-42
 Identities = 78/104 (75%), Positives = 96/104 (92%)
 Frame = +3

Query: 3    GLRKTPGWSSMELDGRIEVFYTANQSHPQCKEIYKELEDLTEKMKSMGYTPDFTFVLQDV 182
            GL+KTPGWS++E++ +++VFYT NQSHP+CKEIY+EL  LT KMKS+GY PD++FVLQDV
Sbjct: 752  GLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDV 811

Query: 183  EDDEKEHILTSHSERLAIAFGILNTLPKTTLRIFKNLRVCGDCH 314
            E+DEKEHILTSHSERLAIAFGI++T PK+ +RIFKNLRVCGDCH
Sbjct: 812  EEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCH 855


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  175 bits (444), Expect = 3e-42
 Identities = 78/104 (75%), Positives = 96/104 (92%)
 Frame = +3

Query: 3   GLRKTPGWSSMELDGRIEVFYTANQSHPQCKEIYKELEDLTEKMKSMGYTPDFTFVLQDV 182
           GL+KTPGWS++E++ +++VFYT NQSHP+CKEIY+EL  LT KMKS+GY PD++FVLQDV
Sbjct: 519 GLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDV 578

Query: 183 EDDEKEHILTSHSERLAIAFGILNTLPKTTLRIFKNLRVCGDCH 314
           E+DEKEHILTSHSERLAIAFGI++T PK+ +RIFKNLRVCGDCH
Sbjct: 579 EEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCH 622


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  175 bits (444), Expect = 3e-42
 Identities = 78/104 (75%), Positives = 96/104 (92%)
 Frame = +3

Query: 3    GLRKTPGWSSMELDGRIEVFYTANQSHPQCKEIYKELEDLTEKMKSMGYTPDFTFVLQDV 182
            GL+KTPGWS++E++ +++VFYT NQSHP+CKEIY+EL  LT KMKS+GY PD++FVLQDV
Sbjct: 752  GLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDV 811

Query: 183  EDDEKEHILTSHSERLAIAFGILNTLPKTTLRIFKNLRVCGDCH 314
            E+DEKEHILTSHSERLAIAFGI++T PK+ +RIFKNLRVCGDCH
Sbjct: 812  EEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCH 855


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