BLASTX nr result

ID: Lithospermum22_contig00026954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026954
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO73529.1| gag-pol polyprotein [Glycine max]                       59   3e-07
gb|AAC64917.1| gag-pol polyprotein [Glycine max]                       56   3e-06
gb|ABN08974.1| gag-pol polyprotein, putative [Medicago truncatula]     55   5e-06
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                       55   6e-06
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                       55   8e-06

>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = -2

Query: 280  IRELVADKVISLEHITTTKKIGDIFIKALHSKQFESSSTSLGLCILD 140
            IRELV DKVI+LEH+ T ++I DIF KAL +KQFE     LG+C+L+
Sbjct: 1529 IRELVDDKVITLEHVDTEEQIADIFTKALDAKQFEKLRGKLGICLLE 1575


>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
          Length = 1550

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = -2

Query: 280  IRELVADKVISLEHITTTKKIGDIFIKALHSKQFESSSTSLGLCILD 140
            IR+LV DKVI+LEH+ T ++I DIF KAL + QFE     LG+C+L+
Sbjct: 1502 IRDLVDDKVITLEHVDTEEQIADIFTKALDANQFEKLRGKLGICLLE 1548


>gb|ABN08974.1| gag-pol polyprotein, putative [Medicago truncatula]
          Length = 469

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/45 (53%), Positives = 35/45 (77%)
 Frame = -2

Query: 280 IRELVADKVISLEHITTTKKIGDIFIKALHSKQFESSSTSLGLCI 146
           IR+LV DKV++LEH+ T +++ DIF KAL  KQFE+  + LG+C+
Sbjct: 421 IRDLVEDKVVTLEHVATEEQLADIFTKALDVKQFENLRSKLGVCL 465


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = -2

Query: 280  IRELVADKVISLEHITTTKKIGDIFIKALHSKQFESSSTSLGLCILD 140
            IR+LV DKVI+L+H+ T ++I DIF KAL + QFE     LG+C+L+
Sbjct: 1528 IRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGICVLE 1574


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = -2

Query: 280  IRELVADKVISLEHITTTKKIGDIFIKALHSKQFESSSTSLGLCILD 140
            IR+LV DKVI+L+H+ T ++I DIF KAL + QFE     LG+C+L+
Sbjct: 1526 IRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGICLLE 1572


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