BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026914
         (1677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   693   0.0  
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   655   0.0  
ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|2...   655   0.0  
ref|NP_175673.1| pentatricopeptide repeat-containing protein [Ar...   635   e-179
ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi...   635   e-179

>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  693 bits (1788), Expect = 0.0
 Identities = 326/481 (67%), Positives = 396/481 (82%)
 Frame = -1

Query: 1590 SDPHLINDICRVLSDFRSPHHDIESALHPFATNISPNYVEQVLKRCKNLGFSAHRFFIWA 1411
            S    IN+I R+LSDFR PHHD+E  L  F+  I+P  VEQVLKRCKNLGFSAHRFF+WA
Sbjct: 45   SSSQYINEISRILSDFRDPHHDLERPLTAFSQKITPGLVEQVLKRCKNLGFSAHRFFLWA 104

Query: 1410 QNLPNFTHSKESYHILVDVLGSSKQFPLIWDFLAELKRCEFYEIESEIFWVVFRAYCRAN 1231
            + LP F HSKESYHILVD+LGSSKQFPLIWDFL++++     EI  EIFW++FRAYCRAN
Sbjct: 105  KRLPGFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRAN 164

Query: 1230 LPNDAIRAYNKMVDFGIKSNIDDLDQLLYSLCKRGHVKHAQEFFDNVKDDYAVGAKSYNI 1051
            LP DAIRA+++M DFG+K+ + D+DQLLY LCKR HVK AQEFFD V  +    AK+Y+I
Sbjct: 165  LPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSI 224

Query: 1050 LIKGWGKIGEASEARRLFDEMLERGCLVDLLAYNSVLDCLCKGGNVDDAYKFFMKMKSMG 871
            L++GWG +G++SEAR+LF+EM ERGC VD++AYNS+L+ LCKGGNVD+AYK F +M S G
Sbjct: 225  LMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNG 284

Query: 870  IKPDAYTHSIFIHAACEANDIHSAFKILDRMRRYKLVPNVFTYNNMIKNLCKSDKVDDAY 691
            + PDA ++SIFI A CE NDIHSAF++LDRMRRY LVPNVFTYN ++K LCKS+KVD+AY
Sbjct: 285  LAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAY 344

Query: 690  KLLREMIESGVAPDVWSYNAILAFHADQSEVNGALRLISRMDEESCKPDRHTYNMVLKML 511
            +LL EMIE GV+PD+WSYNAI AFH D  EVN ALRLISRM++E+C PDRHTYNMVLKML
Sbjct: 345  QLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKML 404

Query: 510  IKVGRFDRVEEVWERMEKRGFYPTVSTYAVMIHGFLKKKGKVEEACKYFEMMIDEGLPPY 331
            ++VGRFDRV +VW  ME+RGFYP  STYAVM+HGF KKKGK+EEACKYFEMMID+G+PPY
Sbjct: 405  LRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPY 464

Query: 330  VSTCEVFRNKLIGLGFASQADILAAKMERSTSCSIQELANVMKGNRTSVVSRREELSSGS 151
              T E+ RN++IGLGF+ Q D+LA KMERSTSC IQEL++VM+G + S   R EE +  S
Sbjct: 465  SCTVELLRNRVIGLGFSEQIDVLAGKMERSTSCVIQELSSVMRGEKASGRLRSEEQNLPS 524

Query: 150  E 148
            E
Sbjct: 525  E 525


>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  655 bits (1690), Expect = 0.0
 Identities = 307/479 (64%), Positives = 383/479 (79%)
 Frame = -1

Query: 1584 PHLINDICRVLSDFRSPHHDIESALHPFATNISPNYVEQVLKRCKNLGFSAHRFFIWAQN 1405
            P L+N+I R+LSD R+PHHD+E +L  ++++IS   VEQVLKRCKNLGFSA RFF+WA+ 
Sbjct: 41   PDLVNEISRILSDHRNPHHDLELSLTTYSSHISTTLVEQVLKRCKNLGFSAQRFFLWAKR 100

Query: 1404 LPNFTHSKESYHILVDVLGSSKQFPLIWDFLAELKRCEFYEIESEIFWVVFRAYCRANLP 1225
            +P F HSKESYHILVD+LGSSKQF L+WDFL E++  + +EI  ++FW+VFRAY RANLP
Sbjct: 101  IPGFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLP 160

Query: 1224 NDAIRAYNKMVDFGIKSNIDDLDQLLYSLCKRGHVKHAQEFFDNVKDDYAVGAKSYNILI 1045
            +DAIRA+++MV+FG+K  IDDLDQLLY LCKR H KHAQ+ FD VK  +   AK+Y+IL+
Sbjct: 161  SDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILV 220

Query: 1044 KGWGKIGEASEARRLFDEMLERGCLVDLLAYNSVLDCLCKGGNVDDAYKFFMKMKSMGIK 865
            +GWG IGE+  A ++FDEM E+ C VD+LAYNS+L+  CKGG V +AYK F +M S GIK
Sbjct: 221  RGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIK 280

Query: 864  PDAYTHSIFIHAACEANDIHSAFKILDRMRRYKLVPNVFTYNNMIKNLCKSDKVDDAYKL 685
            PDA T SIFI A CEANDIH A+++LD M+RY LVPNVFTYN MIK LCK +KV++AY+L
Sbjct: 281  PDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQL 340

Query: 684  LREMIESGVAPDVWSYNAILAFHADQSEVNGALRLISRMDEESCKPDRHTYNMVLKMLIK 505
            L E+IE    PD WSYNAILA+H + SEVN A RLISRM +++C PD+H+YNM+LK+LI+
Sbjct: 341  LNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIR 400

Query: 504  VGRFDRVEEVWERMEKRGFYPTVSTYAVMIHGFLKKKGKVEEACKYFEMMIDEGLPPYVS 325
            VGRFDR  EVWE M ++GFYP+VSTY+VM+HG  KKKGK+EEACKYFEMMIDEG+PPY S
Sbjct: 401  VGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSS 460

Query: 324  TCEVFRNKLIGLGFASQADILAAKMERSTSCSIQELANVMKGNRTSVVSRREELSSGSE 148
            T E+ RN+LIGLG     +ILA KME ST+CSIQELA  M+G +  V SR EE  S S+
Sbjct: 461  TVEILRNRLIGLGLLDYIEILAGKMEHSTACSIQELAIAMRGGKVHVRSRSEETESESD 519


>ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|222848249|gb|EEE85796.1|
            predicted protein [Populus trichocarpa]
          Length = 523

 Score =  655 bits (1690), Expect = 0.0
 Identities = 302/479 (63%), Positives = 389/479 (81%)
 Frame = -1

Query: 1584 PHLINDICRVLSDFRSPHHDIESALHPFATNISPNYVEQVLKRCKNLGFSAHRFFIWAQN 1405
            P L+N+I R+LSD R+PHHD+E++L+ F++ IS N VEQVLKRCKNLGFSAHRFF+WA+ 
Sbjct: 45   PGLVNEISRILSDQRNPHHDLETSLNAFSSEISTNLVEQVLKRCKNLGFSAHRFFLWAKR 104

Query: 1404 LPNFTHSKESYHILVDVLGSSKQFPLIWDFLAELKRCEFYEIESEIFWVVFRAYCRANLP 1225
            +P F HS+ESYHILV++LG+S+QF ++WDFL E++    +EI  EI W+VFR+Y RANLP
Sbjct: 105  IPGFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLP 164

Query: 1224 NDAIRAYNKMVDFGIKSNIDDLDQLLYSLCKRGHVKHAQEFFDNVKDDYAVGAKSYNILI 1045
            +DAIRA+++M +FG++ ++DDLD+LLY LCK  HVK AQ+FFD VK  +   AK+Y+IL+
Sbjct: 165  SDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILV 224

Query: 1044 KGWGKIGEASEARRLFDEMLERGCLVDLLAYNSVLDCLCKGGNVDDAYKFFMKMKSMGIK 865
            +GWG IGEA EAR++FDEM  RGC +D+LAYNS+L+ LCKGGNVD+AYK F ++ S G++
Sbjct: 225  RGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVE 284

Query: 864  PDAYTHSIFIHAACEANDIHSAFKILDRMRRYKLVPNVFTYNNMIKNLCKSDKVDDAYKL 685
            PDA +++IFI A CEAN+IHS F +LDRM+RY LVPNVFTYN +IK LCK+ KV+DAY+L
Sbjct: 285  PDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQL 344

Query: 684  LREMIESGVAPDVWSYNAILAFHADQSEVNGALRLISRMDEESCKPDRHTYNMVLKMLIK 505
            L EM+E GV+PD WSYN ILA+H + SEVN A +LIS M +++C PDRH+YNM+LK+L++
Sbjct: 345  LHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVR 404

Query: 504  VGRFDRVEEVWERMEKRGFYPTVSTYAVMIHGFLKKKGKVEEACKYFEMMIDEGLPPYVS 325
            VGRFDR  E+WE M +RGFYP+VSTY+VMIHG  KKKGK+EEAC+YFE MIDEG+PPY S
Sbjct: 405  VGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYAS 464

Query: 324  TCEVFRNKLIGLGFASQADILAAKMERSTSCSIQELANVMKGNRTSVVSRREELSSGSE 148
            T E+ RN+LIG G     +ILA KMER TSCSIQELA  M+GN+  V SR EE    SE
Sbjct: 465  TIEMLRNRLIGFGLLDHIEILACKMERGTSCSIQELAKEMRGNKACVRSRNEETELESE 523


>ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g52640, mitochondrial; Flags: Precursor
            gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535
            DUF domains [Arabidopsis thaliana]
            gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis
            thaliana] gi|62320530|dbj|BAD95108.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332194712|gb|AEE32833.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  635 bits (1638), Expect = e-179
 Identities = 295/486 (60%), Positives = 382/486 (78%), Gaps = 1/486 (0%)
 Frame = -1

Query: 1584 PHLINDICRVLSDFRSPHHDIESALHPFATNISPNYVEQVLKRCKNLGFSAHRFFIWAQN 1405
            P L+N+I RVLSD R+P  D+E  L  ++  +S N VEQVLKRCKNLGF AHRFF+WA+ 
Sbjct: 35   PDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARR 94

Query: 1404 LPNFTHSKESYHILVDVLGSSKQFPLIWDFLAELKRCEFYEIESEIFWVVFRAYCRANLP 1225
            +P+F HS ESYHILV++LGSSKQF L+WDFL E +   ++EI S++FW+VFRAY RANLP
Sbjct: 95   IPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLP 154

Query: 1224 NDAIRAYNKMVDFGIKSNIDDLDQLLYSLCKRGHVKHAQEFFDNVKDDYAV-GAKSYNIL 1048
            ++A RA+N+MV+FGIK  +DDLDQLL+SLC + HV HAQEFF   K    V  AK+Y+IL
Sbjct: 155  SEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214

Query: 1047 IKGWGKIGEASEARRLFDEMLERGCLVDLLAYNSVLDCLCKGGNVDDAYKFFMKMKSMGI 868
            ++GW +I +AS AR++FDEMLER C+VDLLAYN++LD LCK G+VD  YK F +M ++G+
Sbjct: 215  VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274

Query: 867  KPDAYTHSIFIHAACEANDIHSAFKILDRMRRYKLVPNVFTYNNMIKNLCKSDKVDDAYK 688
            KPDAY+ +IFIHA C+A D+HSA+K+LDRM+RY LVPNV+T+N++IK LCK++KVDDAY 
Sbjct: 275  KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334

Query: 687  LLREMIESGVAPDVWSYNAILAFHADQSEVNGALRLISRMDEESCKPDRHTYNMVLKMLI 508
            LL EMI+ G  PD W+YN+I+A+H D  EVN A +L+SRMD   C PDRHTYNMVLK+LI
Sbjct: 335  LLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLI 394

Query: 507  KVGRFDRVEEVWERMEKRGFYPTVSTYAVMIHGFLKKKGKVEEACKYFEMMIDEGLPPYV 328
            ++GRFDR  E+WE M +R FYPTV+TY VMIHG ++KKGK+EEAC+YFEMMIDEG+PPY 
Sbjct: 395  RIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYS 454

Query: 327  STCEVFRNKLIGLGFASQADILAAKMERSTSCSIQELANVMKGNRTSVVSRREELSSGSE 148
            +T E+ RN+L+G G     D+LA KMERS+SCS+Q++A  M+G R  +  R    S  SE
Sbjct: 455  TTVEMLRNRLVGWGQMDVVDVLAGKMERSSSCSVQDMAVEMRGKRRRLGRR----SENSE 510

Query: 147  YSD*EF 130
              D +F
Sbjct: 511  DDDDDF 516


>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Glycine max]
          Length = 523

 Score =  635 bits (1638), Expect = e-179
 Identities = 296/487 (60%), Positives = 384/487 (78%)
 Frame = -1

Query: 1647 HPSNYIVFQQFSCEPLITQSDPHLINDICRVLSDFRSPHHDIESALHPFATNISPNYVEQ 1468
            H  +Y  F  F    +     P L+N+I R+LSD R PHHD+E +L+PF+  +S N VEQ
Sbjct: 23   HKPSYHHFHSFPTSQVSGTLLPDLVNEISRLLSDHRYPHHDLELSLNPFSAQLSTNLVEQ 82

Query: 1467 VLKRCKNLGFSAHRFFIWAQNLPNFTHSKESYHILVDVLGSSKQFPLIWDFLAELKRCEF 1288
            VLKRCKNLGFSAHRFF+WA+++P F HS  S+HILV++LGS KQF ++WDFL E++    
Sbjct: 83   VLKRCKNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLTEMRESHH 142

Query: 1287 YEIESEIFWVVFRAYCRANLPNDAIRAYNKMVDFGIKSNIDDLDQLLYSLCKRGHVKHAQ 1108
            YEI SEIFW++FRAY +ANLP+ AIR++N+M +FG+K  I DLD+LL+ LCKR HVK AQ
Sbjct: 143  YEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQ 202

Query: 1107 EFFDNVKDDYAVGAKSYNILIKGWGKIGEASEARRLFDEMLERGCLVDLLAYNSVLDCLC 928
            + F   K+ +++ AK+Y+ILI GWG+IG++ +A  LF  MLE+GC VDLLAYN++L  LC
Sbjct: 203  QLFHQAKNRFSLTAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALC 262

Query: 927  KGGNVDDAYKFFMKMKSMGIKPDAYTHSIFIHAACEANDIHSAFKILDRMRRYKLVPNVF 748
            KGG VD+A   F  M S  ++PDA+T+SIFIH+ C+A+D+ SAF++LD+MRRY L+PNVF
Sbjct: 263  KGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVF 322

Query: 747  TYNNMIKNLCKSDKVDDAYKLLREMIESGVAPDVWSYNAILAFHADQSEVNGALRLISRM 568
            TYN +IK LCK++ V++AY+LL EMI  GV PD WSYNAI A+H D  EVN ALRL+ RM
Sbjct: 323  TYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRM 382

Query: 567  DEESCKPDRHTYNMVLKMLIKVGRFDRVEEVWERMEKRGFYPTVSTYAVMIHGFLKKKGK 388
            +++ C PDRHTYNMVLK+LI++GRFD+V EVWE M  + FYP+VSTY+VMIHGF KKKGK
Sbjct: 383  EKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGK 442

Query: 387  VEEACKYFEMMIDEGLPPYVSTCEVFRNKLIGLGFASQADILAAKMERSTSCSIQELANV 208
            +EEACKYFEMMIDEG+PPYV+T E+ RN+L+GLGF    +ILAAKM +STS +IQELAN+
Sbjct: 443  LEEACKYFEMMIDEGIPPYVTTVEMLRNRLLGLGFIDHIEILAAKMRQSTSYAIQELANI 502

Query: 207  MKGNRTS 187
            M GNRT+
Sbjct: 503  MIGNRTA 509