BLASTX nr result

ID: Lithospermum22_contig00026889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026889
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522814.1| Chitin-inducible gibberellin-responsive prot...    65   6e-09
ref|XP_002319796.1| GRAS family transcription factor [Populus tr...    57   2e-06

>ref|XP_002522814.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus
           communis] gi|223537898|gb|EEF39512.1| Chitin-inducible
           gibberellin-responsive protein, putative [Ricinus
           communis]
          Length = 459

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 58/147 (39%), Positives = 68/147 (46%), Gaps = 34/147 (23%)
 Frame = -2

Query: 346 SPSSPFSAHRD-------SDNFEQQSSWGNLSNSSP-----LDHNYYIQQLSSPLDQHPV 203
           SP+SPFS   D       SD+ EQ S   NLS +SP     L+ N Y    S  L Q   
Sbjct: 44  SPNSPFSNQFDCDTITTLSDSTEQYSPTENLSGASPSCNSSLESNNYFHHRSPSLLQ--- 100

Query: 202 GVHNAISGQSIKHRLWELESALMAPDEED---------EVS-------------QSPQGS 89
              +A SGQ+IKHRL +LE+ALM PD+ED         E S             Q  QGS
Sbjct: 101 ---DANSGQNIKHRLLQLETALMGPDDEDISMPNNALGESSRPQTSGQRTRAWCQERQGS 157

Query: 88  TTPQRQPSHVSRIAHLDETSQSENSHQ 8
              Q QPS VSR     E S  E  H+
Sbjct: 158 RVIQPQPSFVSRQRQACEGSSVEKYHK 184


>ref|XP_002319796.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222858172|gb|EEE95719.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 583

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 52/158 (32%), Positives = 66/158 (41%), Gaps = 43/158 (27%)
 Frame = -2

Query: 346 SPSSPFSAHRDSDNF--------EQQSSWGNLSNSSP-----LDHNYYIQQLSSPLDQH- 209
           SPSSPF    D D +        E  SS  NLS  SP     L+ N Y  + S  +D   
Sbjct: 43  SPSSPFYTEFDCDTYTATLSDSQECYSSTDNLSGVSPSRNSSLESNSYFNRPSPSVDCRI 102

Query: 208 ---------PVGVHNAISGQSIKHRLWELESALMAPDEEDEVSQS--------------- 101
                       + +A S Q+IKH L ELE+ALM PD++DE++ S               
Sbjct: 103 ESLQLFSGGTSSLQDASSSQNIKHALQELETALMGPDDDDELNTSNASLGDSSTPQTSDQ 162

Query: 100 -----PQGSTTPQRQPSHVSRIAHLDETSQSENSHQRM 2
                 QGS   Q Q S VSR   L E +  E   + M
Sbjct: 163 KPRAWRQGSHVIQNQTSFVSRQRQLGEGAHVEKRQKSM 200


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