BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026879
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636929.1| Ribulose bisphosphate carboxylase small chai...   143   1e-32
sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carbox...   142   4e-32
ref|XP_003637843.1| Ribulose bisphosphate carboxylase small chai...   141   6e-32
ref|XP_003637842.1| Ribulose bisphosphate carboxylase small chai...   141   6e-32
gb|AFK48034.1| unknown [Lotus japonicus]                              140   1e-31

>ref|XP_003636929.1| Ribulose bisphosphate carboxylase small chain 3A [Medicago
           truncatula] gi|355502864|gb|AES84067.1| Ribulose
           bisphosphate carboxylase small chain 3A [Medicago
           truncatula]
          Length = 613

 Score =  143 bits (361), Expect = 1e-32
 Identities = 72/89 (80%), Positives = 78/89 (87%), Gaps = 2/89 (2%)
 Frame = +2

Query: 47  ASMISSTAVTTVNRASPAQ--AVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVW 220
           +SMISS+A+TTVNRASP Q  AVAPF GLKSMAGFP+TK N DITSI SNG RVNCMQVW
Sbjct: 3   SSMISSSAITTVNRASPVQSGAVAPFVGLKSMAGFPITKVNKDITSITSNGGRVNCMQVW 62

Query: 221 PTQGKKKFETLSYLPPLTPEQLAREVDYL 307
           P  GKKKFETLSYLPPLT EQLA+EV+YL
Sbjct: 63  PPIGKKKFETLSYLPPLTREQLAKEVEYL 91


>sp|O65194.1|RBS_MEDSA RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|3044116|gb|AAC13293.1|
           ribulose-1,5-bisphosphate carboxylase small subunit
           [Medicago sativa]
          Length = 180

 Score =  142 bits (357), Expect = 4e-32
 Identities = 75/89 (84%), Positives = 79/89 (88%), Gaps = 3/89 (3%)
 Frame = +2

Query: 50  SMISSTAVTTVNRASPAQA--VAPFTGLKSMAGFPVTKK-NNDITSIASNGSRVNCMQVW 220
           ++ISS AVTTVNRAS AQA  VAPFTGLKS AGFPVTKK NNDITSIASNG RVNCMQVW
Sbjct: 2   ALISSAAVTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVW 61

Query: 221 PTQGKKKFETLSYLPPLTPEQLAREVDYL 307
           P  GKKKFETLSYLPPLT EQLA+EV+YL
Sbjct: 62  PPVGKKKFETLSYLPPLTEEQLAKEVEYL 90


>ref|XP_003637843.1| Ribulose bisphosphate carboxylase small chain 3A [Medicago
           truncatula] gi|355503778|gb|AES84981.1| Ribulose
           bisphosphate carboxylase small chain 3A [Medicago
           truncatula]
          Length = 181

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/89 (82%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
 Frame = +2

Query: 47  ASMISSTAVTTVNRASPAQ--AVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVW 220
           +SMISS+AVTTVNRAS  Q  AVAPF GLKSMAGFPVTK N DITSI SNG RVNCMQVW
Sbjct: 3   SSMISSSAVTTVNRASSVQSGAVAPFVGLKSMAGFPVTKVNKDITSITSNGGRVNCMQVW 62

Query: 221 PTQGKKKFETLSYLPPLTPEQLAREVDYL 307
           P  GKKKFETLSYLPPLT EQLA+EV+YL
Sbjct: 63  PPIGKKKFETLSYLPPLTREQLAKEVEYL 91


>ref|XP_003637842.1| Ribulose bisphosphate carboxylase small chain 3A [Medicago
           truncatula] gi|355503777|gb|AES84980.1| Ribulose
           bisphosphate carboxylase small chain 3A [Medicago
           truncatula]
          Length = 106

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/89 (82%), Positives = 77/89 (86%), Gaps = 2/89 (2%)
 Frame = +2

Query: 47  ASMISSTAVTTVNRASPAQ--AVAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVW 220
           +SMISS+AVTTVNRAS  Q  AVAPF GLKSMAGFPVTK N DITSI SNG RVNCMQVW
Sbjct: 3   SSMISSSAVTTVNRASSVQSGAVAPFVGLKSMAGFPVTKVNKDITSITSNGGRVNCMQVW 62

Query: 221 PTQGKKKFETLSYLPPLTPEQLAREVDYL 307
           P  GKKKFETLSYLPPLT EQLA+EV+YL
Sbjct: 63  PPIGKKKFETLSYLPPLTREQLAKEVEYL 91


>gb|AFK48034.1| unknown [Lotus japonicus]
          Length = 181

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/89 (79%), Positives = 78/89 (87%), Gaps = 2/89 (2%)
 Frame = +2

Query: 47  ASMISSTAVTTVNRASPAQA--VAPFTGLKSMAGFPVTKKNNDITSIASNGSRVNCMQVW 220
           +SMI+S+AVTT+N ASPAQA  VAPFTGLKSMAGFPV K NNDITSIA+NG RV CMQVW
Sbjct: 3   SSMITSSAVTTINSASPAQANMVAPFTGLKSMAGFPVRKVNNDITSIANNGGRVQCMQVW 62

Query: 221 PTQGKKKFETLSYLPPLTPEQLAREVDYL 307
           P  GKKKFETLSYLPPLT EQL +EV+YL
Sbjct: 63  PPIGKKKFETLSYLPPLTTEQLLKEVEYL 91