BLASTX nr result
ID: Lithospermum22_contig00026876
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00026876
(889 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 239 6e-61
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 228 1e-57
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ... 226 7e-57
ref|NP_172763.1| pentatricopeptide repeat-containing protein [Ar... 221 2e-55
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2... 220 3e-55
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 239 bits (610), Expect = 6e-61
Identities = 117/176 (66%), Positives = 146/176 (82%)
Frame = -2
Query: 879 TKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLYTT 700
TKRA+KL EEMG GI PDVVT+TIL++AFLR+G+S++AKKLLDQMT +GL PDRVLYTT
Sbjct: 340 TKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTT 399
Query: 699 IVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQSRG 520
IVDHLCK G++ +A+ +F DM+E I PD VSYNALI+G C+AS V+EAM LY++M + G
Sbjct: 400 IVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGG 459
Query: 519 LCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSALQQVDAS 352
CPD VTFKLII GLI EK +++AC VWDQMMEKGFTL+ ++ETLV+A+ DAS
Sbjct: 460 PCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAIHSNDAS 515
Score = 107 bits (268), Expect = 3e-21
Identities = 60/172 (34%), Positives = 95/172 (55%)
Frame = -2
Query: 885 GRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLY 706
G +A ++ M +NG PD+VTY +L+ + + A+ L+ +M G+EPD Y
Sbjct: 233 GWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSY 292
Query: 705 TTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQS 526
++ LCKA R+D AY + + +E + D VSYN +I C AS A +L++EM
Sbjct: 293 NELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGG 352
Query: 525 RGLCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSAL 370
+G+ PD VTF ++IK +RE + +A + DQM G ++ L T+V L
Sbjct: 353 KGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHL 404
Score = 84.7 bits (208), Expect = 3e-14
Identities = 45/135 (33%), Positives = 71/135 (52%)
Frame = -2
Query: 888 EGRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVL 709
E + A +++ M + G PD+VTYTI++ R G D A ++ M G PD
Sbjct: 127 ENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKA 186
Query: 708 YTTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQ 529
+V LC G++DLAY+L + RI YN+LI+GFC+A + +A + M+
Sbjct: 187 CRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMR 246
Query: 528 SRGLCPDGVTFKLII 484
G PD VT+ +++
Sbjct: 247 RNGCEPDLVTYNVLL 261
Score = 84.7 bits (208), Expect = 3e-14
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Frame = -2
Query: 876 KRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLL-DQMTNVGLEPDRVLYTT 700
+ A L+++M ++G+ PDV +Y L++ + D A ++ ++M GL D V Y T
Sbjct: 271 EEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGL-CDVVSYNT 329
Query: 699 IVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQSRG 520
I+ LC A AY LF +M + I PD V++ LI F + A +L D+M G
Sbjct: 330 IIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLG 389
Query: 519 LCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSAL 370
L PD V + I+ L + + +A SV+ M+E G T + L++ L
Sbjct: 390 LLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGL 439
Score = 84.7 bits (208), Expect = 3e-14
Identities = 43/138 (31%), Positives = 72/138 (52%)
Frame = -2
Query: 888 EGRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVL 709
EG + A KLL++M G++PD V YT +V+ + G MA + M G+ PD V
Sbjct: 372 EGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVS 431
Query: 708 YTTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQ 529
Y +++ LC+A R+ A L+ DM PD V++ +I G ++ A R++D+M
Sbjct: 432 YNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMM 491
Query: 528 SRGLCPDGVTFKLIIKGL 475
+G DG + ++ +
Sbjct: 492 EKGFTLDGAVSETLVNAI 509
Score = 74.3 bits (181), Expect = 3e-11
Identities = 45/172 (26%), Positives = 76/172 (44%)
Frame = -2
Query: 885 GRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLY 706
G +A K +EM ++ + Y + +R+ D+A++ D+M G + Y
Sbjct: 23 GLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTY 82
Query: 705 TTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQS 526
+ + LCK L L DM PD +YN ++ C + + A+ + M
Sbjct: 83 SRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVE 142
Query: 525 RGLCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSAL 370
+G PD VT+ ++I GL R A +W M+ KGF+ ++ LV L
Sbjct: 143 KGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGL 194
Score = 70.9 bits (172), Expect = 4e-10
Identities = 43/175 (24%), Positives = 79/175 (45%)
Frame = -2
Query: 888 EGRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVL 709
+ R A + + M G + TY+ + + N + +KLL+ M +G PD
Sbjct: 57 QSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWA 116
Query: 708 YTTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQ 529
Y ++ LC ++D+A + M+E+ PD V+Y +I+G C+A A+ ++ M
Sbjct: 117 YNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMV 176
Query: 528 SRGLCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSALQQ 364
+G PD + ++ GL + V LA + M K + +L++ Q
Sbjct: 177 RKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQ 231
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 228 bits (582), Expect = 1e-57
Identities = 107/180 (59%), Positives = 145/180 (80%)
Frame = -2
Query: 885 GRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLY 706
G T A+KL EEMGQ GI PDVVT+TI ++AFL KG+ ++AKKLLDQMT +GL PD + Y
Sbjct: 339 GDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFY 398
Query: 705 TTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQS 526
TTI+DHLCK+G++++A+ +F DM+EQ I+PD +S+NALI+GFCK S V+EAM LY+EMQ+
Sbjct: 399 TTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQN 458
Query: 525 RGLCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSALQQVDASSA 346
RG PD VT+KLII GLI EK +++AC VW QMM+KGFTL++ +A+TL+ +AS++
Sbjct: 459 RGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRGNSIENASTS 518
Score = 104 bits (259), Expect = 3e-20
Identities = 60/172 (34%), Positives = 90/172 (52%)
Frame = -2
Query: 885 GRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLY 706
GR +A + M +NG PD+VTY + + F + D AKKLL M G+EPD Y
Sbjct: 234 GRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSY 293
Query: 705 TTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQS 526
++ +CK D AY L + + + D VSYN +I FCK T A +L++EM
Sbjct: 294 NQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQ 353
Query: 525 RGLCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSAL 370
+G+ PD VTF + IK + + + +A + DQM E G + + T++ L
Sbjct: 354 KGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHL 405
Score = 88.2 bits (217), Expect = 2e-15
Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Frame = -2
Query: 888 EGRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVL 709
EGR A ++ E++ +NG PDVVTYTI++ + D A + M + G PD
Sbjct: 127 EGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKA 186
Query: 708 YTTIVDHLCKAGRIDLAYDLFHDMLEQ-RIAPDPVSYNALISGFCKASGVTEAMRLYDEM 532
IV LC ++DLAY+L D+++ R+ + YNALISGFC+A + +A + M
Sbjct: 187 CGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFM 246
Query: 531 QSRGLCPDGVTFKLII 484
+ G PD VT+ + +
Sbjct: 247 RRNGCEPDLVTYNVFL 262
Score = 78.2 bits (191), Expect = 2e-12
Identities = 36/137 (26%), Positives = 70/137 (51%)
Frame = -2
Query: 888 EGRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVL 709
+G A KLL++M + G+ PD + YT +++ + G +MA + M G+ PD +
Sbjct: 373 KGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVIS 432
Query: 708 YTTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQ 529
+ +++ CK R+ A L+ +M + PD V+Y +I G + ++ A ++ +M
Sbjct: 433 FNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMM 492
Query: 528 SRGLCPDGVTFKLIIKG 478
+G D + +I+G
Sbjct: 493 DKGFTLDRAIAQTLIRG 509
Score = 67.0 bits (162), Expect = 6e-09
Identities = 40/172 (23%), Positives = 70/172 (40%)
Frame = -2
Query: 885 GRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLY 706
G +A ++ +EM Q+ + Y + + D+A QM G Y
Sbjct: 23 GLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTY 82
Query: 705 TTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQS 526
+ + LCK +L HDM PD ++N + + A+ +++++
Sbjct: 83 SRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVK 142
Query: 525 RGLCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSAL 370
G PD VT+ +II G+ + K A W M+ KGF+ + +V L
Sbjct: 143 NGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGL 194
Score = 64.3 bits (155), Expect = 4e-08
Identities = 40/146 (27%), Positives = 65/146 (44%)
Frame = -2
Query: 852 EMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLYTTIVDHLCKAG 673
+MG G TY+ + + N +LL M + PD + + L G
Sbjct: 69 QMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEG 128
Query: 672 RIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQSRGLCPDGVTFK 493
RIDLA ++F +++ PD V+Y +I G CK A++ + +M +G PD
Sbjct: 129 RIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACG 188
Query: 492 LIIKGLIREKNVALACSVWDQMMEKG 415
I+ GL + V LA + +M+ G
Sbjct: 189 AIVVGLCDGRKVDLAYELIIDVMKSG 214
>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335822|gb|EFH66239.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 517
Score = 226 bits (575), Expect = 7e-57
Identities = 102/169 (60%), Positives = 139/169 (82%)
Frame = -2
Query: 879 TKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLYTT 700
TK+A+KL EEM Q GIV +VVT+T L++AFLR+GNS +AKKLLDQMT +GL PDR+ YTT
Sbjct: 341 TKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Query: 699 IVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQSRG 520
I+DHLCK+G +D AY +F+DM+E I PD +SYN+LISG C++ VTEA++L+++M+ +
Sbjct: 401 ILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 519 LCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSA 373
CPD +TFK II GLIREK ++ A VWDQMM+KGFTL++D+++TL+ A
Sbjct: 461 CCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 96.3 bits (238), Expect = 9e-18
Identities = 53/172 (30%), Positives = 90/172 (52%)
Frame = -2
Query: 885 GRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLY 706
GR ++A L M + G PD+VTY +L+ + A+ ++ +M G++ D Y
Sbjct: 234 GRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSY 293
Query: 705 TTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQS 526
++ C+ D Y +E R D VSY+ LI FC+AS +A +L++EM+
Sbjct: 294 NQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQ 353
Query: 525 RGLCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSAL 370
+G+ + VTF +IK +RE N ++A + DQM E G + ++ T++ L
Sbjct: 354 KGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHL 405
Score = 86.3 bits (212), Expect = 9e-15
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Frame = -2
Query: 849 MGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLYTTIVDHLCKAGR 670
M Q G PDVV+YTIL+ R G A ++ + M G+ PD +V LC A +
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 669 IDLAYDLFHDMLEQ-RIAPDPVSYNALISGFCKASGVTEAMRLYDEMQSRGLCPDGVTFK 493
+DLAY++ + ++ R+ V YNALISGFCKA + +A L M G PD VT+
Sbjct: 200 VDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYN 259
Query: 492 LIIKGLIREKNVALACSVWDQMMEKGFTLE 403
+++ + A V +M+ G L+
Sbjct: 260 VLLNYYYDNNMLKRAEGVMTEMVRSGIQLD 289
Score = 77.8 bits (190), Expect = 3e-12
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Frame = -2
Query: 876 KRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKK-LLDQMTNVGLEPDRVLYTT 700
KRA ++ EM ++GI D +Y L++ R + D +L +M G D V Y+T
Sbjct: 272 KRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGF-CDVVSYST 330
Query: 699 IVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQSRG 520
+++ C+A AY LF +M ++ I + V++ +LI F + + A +L D+M G
Sbjct: 331 LIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 519 LCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSAL 370
L PD + + I+ L + NV A +++ M+E T + +L+S L
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGL 440
Score = 66.6 bits (161), Expect = 7e-09
Identities = 40/147 (27%), Positives = 68/147 (46%)
Frame = -2
Query: 888 EGRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVL 709
E R + A + +M G TY+ + + ++ LL M +G PD
Sbjct: 57 ESRFELAEAIYRDMMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWA 116
Query: 708 YTTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQ 529
+ +D LC+ ++ A F M+++ PD VSY LI+G +A VT+A+ +++ M
Sbjct: 117 FNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI 176
Query: 528 SRGLCPDGVTFKLIIKGLIREKNVALA 448
G+ PD ++ GL + V LA
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLA 203
Score = 63.2 bits (152), Expect = 8e-08
Identities = 40/172 (23%), Positives = 74/172 (43%)
Frame = -2
Query: 885 GRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLY 706
G A ++ +EM + Y + +++ ++A+ + M +G Y
Sbjct: 23 GMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMMPMGFSLIPFTY 82
Query: 705 TTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQS 526
+ + LCK + +L L DM PD ++N + C+ + V A++ + M
Sbjct: 83 SRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQ 142
Query: 525 RGLCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSAL 370
RG PD V++ ++I GL R V A +W+ M+ G + + LV L
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGL 194
>ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis
thaliana] gi|332190841|gb|AEE28962.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 221 bits (562), Expect = 2e-55
Identities = 100/177 (56%), Positives = 141/177 (79%)
Frame = -2
Query: 879 TKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLYTT 700
T++A++L EEM Q G+V +VVTYT L++AFLR+GNS +AKKLLDQMT +GL PDR+ YTT
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Query: 699 IVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQSRG 520
I+DHLCK+G +D AY +F+DM+E I PD +SYN+LISG C++ VTEA++L+++M+ +
Sbjct: 401 ILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 519 LCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSALQQVDASS 349
CPD +TFK II GLIR K ++ A VWDQMM+KGFTL++D+++TL+ A + A +
Sbjct: 461 CCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMSADA 517
Score = 96.3 bits (238), Expect = 9e-18
Identities = 53/172 (30%), Positives = 91/172 (52%)
Frame = -2
Query: 885 GRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLY 706
GR ++A L M + G PD+VTY +L+ + A+ ++ +M G++ D Y
Sbjct: 234 GRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSY 293
Query: 705 TTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQS 526
++ C+ D Y+ +E R D VSY+ LI FC+AS +A RL++EM+
Sbjct: 294 NQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQ 353
Query: 525 RGLCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSAL 370
+G+ + VT+ +IK +RE N ++A + DQM E G + ++ T++ L
Sbjct: 354 KGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHL 405
Score = 87.0 bits (214), Expect = 5e-15
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Frame = -2
Query: 849 MGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLYTTIVDHLCKAGR 670
M Q G PDVV+YTIL+ R G A ++ + M G+ PD +V LC A +
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 669 IDLAYDLFHDMLEQ-RIAPDPVSYNALISGFCKASGVTEAMRLYDEMQSRGLCPDGVTFK 493
+DLAY++ + ++ R+ V YNALISGFCKA + +A L M G PD VT+
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 492 LIIKGLIREKNVALACSVWDQMMEKGFTLE 403
+++ + A V +M+ G L+
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLD 289
Score = 76.6 bits (187), Expect = 7e-12
Identities = 48/169 (28%), Positives = 84/169 (49%)
Frame = -2
Query: 876 KRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLYTTI 697
KRA ++ EM ++GI D +Y L++ R + D + + D V Y+T+
Sbjct: 272 KRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTL 331
Query: 696 VDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQSRGL 517
++ C+A AY LF +M ++ + + V+Y +LI F + + A +L D+M GL
Sbjct: 332 IETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGL 391
Query: 516 CPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSAL 370
PD + + I+ L + NV A V++ M+E T + +L+S L
Sbjct: 392 SPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGL 440
Score = 68.6 bits (166), Expect = 2e-09
Identities = 41/147 (27%), Positives = 68/147 (46%)
Frame = -2
Query: 888 EGRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVL 709
E R + A + +M G TY+ + + D+ LL M +G PD
Sbjct: 57 ESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWA 116
Query: 708 YTTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQ 529
+ +D LC+ ++ A F M+++ PD VSY LI+G +A VT+A+ +++ M
Sbjct: 117 FNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI 176
Query: 528 SRGLCPDGVTFKLIIKGLIREKNVALA 448
G+ PD ++ GL + V LA
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLA 203
Score = 65.5 bits (158), Expect = 2e-08
Identities = 42/172 (24%), Positives = 74/172 (43%)
Frame = -2
Query: 885 GRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLY 706
G A ++ +EM + Y + +R+ ++A+ + M +G Y
Sbjct: 23 GMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTY 82
Query: 705 TTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQS 526
+ + LCK + DL L DM PD ++N + C+ + V A++ + M
Sbjct: 83 SRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQ 142
Query: 525 RGLCPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSAL 370
RG PD V++ ++I GL R V A +W+ M+ G + + LV L
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGL 194
>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 220 bits (561), Expect = 3e-55
Identities = 102/170 (60%), Positives = 137/170 (80%)
Frame = -2
Query: 876 KRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLYTTI 697
+RA+KL EEMG+ GI PDVVT+TIL++AFLR+GNSDMAKKLLD M +GL PDR+ YTTI
Sbjct: 342 RRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTI 401
Query: 696 VDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQSRGL 517
+DH CK+G++++A+ +F DM+E+ I PD VSYNALI+GFCK+ V E M LY++M RG
Sbjct: 402 IDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGS 461
Query: 516 CPDGVTFKLIIKGLIREKNVALACSVWDQMMEKGFTLEKDLAETLVSALQ 367
PD VT+KLII L+RE ++ AC VWDQMME+G TL++ ++E L++A+Q
Sbjct: 462 FPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLINAIQ 511
Score = 81.6 bits (200), Expect = 2e-13
Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Frame = -2
Query: 888 EGRTKRAFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVL 709
E R + A ++ M + G PDVVT+TI+++ + D A + M + G+ PD
Sbjct: 127 ENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKA 186
Query: 708 YTTIVDHLCKAGRIDLAYDLFHDMLEQRIAP-DPVSYNALISGFCKASGVTEAMRLYDEM 532
+ LC G++DLAY+L ++ ++ + YNALISGFC+A + +A+ + M
Sbjct: 187 CVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFM 246
Query: 531 QSRGLCPDGVTFKLII 484
G PD VT+ +++
Sbjct: 247 SRTGCKPDLVTYNVLL 262
Score = 74.3 bits (181), Expect = 3e-11
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 36/205 (17%)
Frame = -2
Query: 885 GRTKRAFKLLEEMGQNGIVP-DVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVL 709
G+ A++L+ + G+ + Y L+ F R G D A ++ M+ G +PD V
Sbjct: 198 GQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVT 257
Query: 708 YTTIVDHLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKA-------------- 571
Y ++++ C + A L M I PD SYN L+ CKA
Sbjct: 258 YNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKM 317
Query: 570 ---------------------SGVTEAMRLYDEMQSRGLCPDGVTFKLIIKGLIREKNVA 454
S A +L++EM +G+ PD VTF ++IK +RE N
Sbjct: 318 VPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSD 377
Query: 453 LACSVWDQMMEKGFTLEKDLAETLV 379
+A + D M G ++ T++
Sbjct: 378 MAKKLLDLMAGMGLLPDRIFYTTII 402
Score = 62.8 bits (151), Expect = 1e-07
Identities = 38/152 (25%), Positives = 65/152 (42%)
Frame = -2
Query: 870 AFKLLEEMGQNGIVPDVVTYTILVEAFLRKGNSDMAKKLLDQMTNVGLEPDRVLYTTIVD 691
A K+ +EM + + Y + +R D+A +M +G Y+ +
Sbjct: 28 AVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFIS 87
Query: 690 HLCKAGRIDLAYDLFHDMLEQRIAPDPVSYNALISGFCKASGVTEAMRLYDEMQSRGLCP 511
LC+ +L DM + PD ++N ++ + + A+ ++ M RG P
Sbjct: 88 GLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREP 147
Query: 510 DGVTFKLIIKGLIREKNVALACSVWDQMMEKG 415
D VTF +II GL + K A W M++KG
Sbjct: 148 DVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKG 179