BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026867
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    61   2e-15
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi...    60   3e-14
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    54   7e-14
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    60   7e-14
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...    56   9e-14

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 61.2 bits (147), Expect(3) = 2e-15
 Identities = 31/64 (48%), Positives = 41/64 (64%)
 Frame = -1

Query: 197  KAGNPRSPYLFIICTEGLISHLNGAVSRRCLSGIKVGQDGVPISHLLFVDDTVLFGEAME 18
            + G+P SPYLFIIC EGL S +  A     +SG K+ ++   ISHLLF DD  LF +A  
Sbjct: 1058 RQGDPLSPYLFIICAEGLSSLIRQAEGSGTISGAKICKNAPIISHLLFADDCFLFFKAKS 1117

Query: 17   GEAR 6
            G+A+
Sbjct: 1118 GQAQ 1121



 Score = 42.4 bits (98), Expect(3) = 2e-15
 Identities = 19/41 (46%), Positives = 27/41 (65%)
 Frame = -3

Query: 348  QIEWSFLRLMMT*LRFPEKWIWMIMLYVESVSYSLLINGNK 226
            +I W +LR +M  + F  KW   IM+ VESV YS+++NG K
Sbjct: 1007 RINWEYLRSIMGKMGFCSKWSEWIMMCVESVDYSVILNGEK 1047



 Score = 23.1 bits (48), Expect(3) = 2e-15
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 232  EQAGYFKPGRGLRRGTLVRP 173
            E+ G   PGRGLR+G  + P
Sbjct: 1046 EKIGPIIPGRGLRQGDPLSP 1065


>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
           gi|222630794|gb|EEE62926.1| hypothetical protein
           OsJ_17731 [Oryza sativa Japonica Group]
          Length = 893

 Score = 60.5 bits (145), Expect(2) = 3e-14
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = -1

Query: 197 KAGNPRSPYLFIICTEGLISHLNGAVSRRCLSGIKVGQDGVPISHLLFVDDTVLFGEAME 18
           + G+P SPYLF+IC EG  S L  A  R  LSG+KV Q    +SHLLF DD++L  +  E
Sbjct: 309 RQGDPISPYLFLICAEGFSSLLYAAEERGDLSGVKVCQQAPSVSHLLFADDSLLLFKVNE 368

Query: 17  GEAR 6
             A+
Sbjct: 369 RSAQ 372



 Score = 42.4 bits (98), Expect(2) = 3e-14
 Identities = 18/40 (45%), Positives = 27/40 (67%)
 Frame = -3

Query: 348 QIEWSFLRLMMT*LRFPEKWIWMIMLYVESVSYSLLINGN 229
           ++EWSFL  MM  L F E W+ +IM  V +V+Y + +NG+
Sbjct: 258 RVEWSFLEKMMVRLGFAEGWVKLIMRCVSTVTYRIKVNGD 297


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 53.9 bits (128), Expect(2) = 7e-14
 Identities = 27/62 (43%), Positives = 39/62 (62%)
 Frame = -1

Query: 197 KAGNPRSPYLFIICTEGLISHLNGAVSRRCLSGIKVGQDGVPISHLLFVDDTVLFGEAME 18
           + G+P SP LF++CTE LI  LN A     ++GI+     V ++HLLF DDT+L  +A +
Sbjct: 633 RQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQFQDKKVSVNHLLFADDTLLMCKATK 692

Query: 17  GE 12
            E
Sbjct: 693 QE 694



 Score = 47.8 bits (112), Expect(2) = 7e-14
 Identities = 24/39 (61%), Positives = 27/39 (69%)
 Frame = -3

Query: 348 QIEWSFLRLMMT*LRFPEKWIWMIMLYVESVSYSLLING 232
           ++EW FL  MMT L F  KWI  IM  V SVSYS+LING
Sbjct: 582 RVEWPFLETMMTALGFNNKWISWIMNCVTSVSYSVLING 620


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 59.7 bits (143), Expect(2) = 7e-14
 Identities = 29/67 (43%), Positives = 42/67 (62%)
 Frame = -1

Query: 224 GLF*TRTRTKAGNPRSPYLFIICTEGLISHLNGAVSRRCLSGIKVGQDGVPISHLLFVDD 45
           GL       + G+P SPYLFI+CTE LI+++  A  +  ++GIKV      +SHLLF DD
Sbjct: 409 GLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADD 468

Query: 44  TVLFGEA 24
           ++ F +A
Sbjct: 469 SLFFCKA 475



 Score = 42.0 bits (97), Expect(2) = 7e-14
 Identities = 17/45 (37%), Positives = 29/45 (64%)
 Frame = -3

Query: 348 QIEWSFLRLMMT*LRFPEKWIWMIMLYVESVSYSLLINGNKRVIL 214
           Q+EW+F+  ++  + F EKWI  IM  + +V Y +LING  + ++
Sbjct: 367 QVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLI 411


>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1319

 Score = 56.2 bits (134), Expect(3) = 9e-14
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = -1

Query: 197 KAGNPRSPYLFIICTEGLISHLNGAVSRRCLSGIKVGQDGVPISHLLFVDDTVLFGEAME 18
           + G+P SP+LF++CTE LI  L  A + + +SGI+    G  ++HLLFVDDT L   A +
Sbjct: 586 RQGDPISPFLFVLCTEALIHILQQAENSKKVSGIQFNGSGPSVNHLLFVDDTQLVCRATK 645

Query: 17  GE 12
            +
Sbjct: 646 SD 647



 Score = 43.9 bits (102), Expect(3) = 9e-14
 Identities = 21/39 (53%), Positives = 29/39 (74%)
 Frame = -3

Query: 348 QIEWSFLRLMMT*LRFPEKWIWMIMLYVESVSYSLLING 232
           ++EWSFL+ ++  L F +KWI  IM  V SV+YS+LING
Sbjct: 535 RVEWSFLQEILVALGFNDKWISWIMGCVTSVTYSVLING 573



 Score = 20.8 bits (42), Expect(3) = 9e-14
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 223 GYFKPGRGLRRGTLVRP 173
           G+  P RG+R+G  + P
Sbjct: 577 GHITPERGIRQGDPISP 593