BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026853
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26002.3| unnamed protein product [Vitis vinifera]              372   e-101
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   372   e-101
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   372   e-101
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi...   369   e-100
ref|NP_187294.1| pentatricopeptide repeat-containing protein [Ar...   365   5e-99

>emb|CBI26002.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  372 bits (956), Expect = e-101
 Identities = 181/249 (72%), Positives = 209/249 (83%)
 Frame = +2

Query: 2   QALEVFEMLREQPFYQPKEKTYMKLVVLLGKSGEPERARQLFVKMVEEGLEPTKELYDAL 181
           QALEVFEMLREQPFYQPKE TYMKL+VLLGKSG+P RA +LF  MVEEG EPT ELY AL
Sbjct: 126 QALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTAL 185

Query: 182 IAAYSKNNAISEAFAILEQMKTLPLCQPDVNTFNILIKACIDDWRFDLVDSLYGQMDERP 361
           +A+Y ++N I EAF+IL QMKTLP CQPDV T++ L+KAC+D  RF+LV+SLY +MD R 
Sbjct: 186 LASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRS 245

Query: 362 ITPNTFTHTIVLSGYGKAGRYEQMEKIFSGMLVSTTCMPDVWTMNTILSLFGKKGQIEMM 541
           ITPNT T  IVLSGYGKAG++++MEK+ SGML ST+  PDVWTMNTILSLFG KGQIE+M
Sbjct: 246 ITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIM 305

Query: 542 EKWYEKFCNFGIEPVSPTFDILISAYGKTHMYDKMLLVMGYMRKLSLPWTTSTYNNIIDV 721
           EKWYEKF NFGIEP + TF+ILI AYGK  MYDKM  VM YMRKL  PWTTSTYNN+I+ 
Sbjct: 306 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 365

Query: 722 FAEVGDAKN 748
           F++VGDAKN
Sbjct: 366 FSDVGDAKN 374


>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vitis vinifera]
          Length = 498

 Score =  372 bits (956), Expect = e-101
 Identities = 181/249 (72%), Positives = 209/249 (83%)
 Frame = +2

Query: 2   QALEVFEMLREQPFYQPKEKTYMKLVVLLGKSGEPERARQLFVKMVEEGLEPTKELYDAL 181
           QALEVFEMLREQPFYQPKE TYMKL+VLLGKSG+P RA +LF  MVEEG EPT ELY AL
Sbjct: 126 QALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTAL 185

Query: 182 IAAYSKNNAISEAFAILEQMKTLPLCQPDVNTFNILIKACIDDWRFDLVDSLYGQMDERP 361
           +A+Y ++N I EAF+IL QMKTLP CQPDV T++ L+KAC+D  RF+LV+SLY +MD R 
Sbjct: 186 LASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRS 245

Query: 362 ITPNTFTHTIVLSGYGKAGRYEQMEKIFSGMLVSTTCMPDVWTMNTILSLFGKKGQIEMM 541
           ITPNT T  IVLSGYGKAG++++MEK+ SGML ST+  PDVWTMNTILSLFG KGQIE+M
Sbjct: 246 ITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIM 305

Query: 542 EKWYEKFCNFGIEPVSPTFDILISAYGKTHMYDKMLLVMGYMRKLSLPWTTSTYNNIIDV 721
           EKWYEKF NFGIEP + TF+ILI AYGK  MYDKM  VM YMRKL  PWTTSTYNN+I+ 
Sbjct: 306 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 365

Query: 722 FAEVGDAKN 748
           F++VGDAKN
Sbjct: 366 FSDVGDAKN 374



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
 Frame = +2

Query: 11  EVFEMLREQPFYQPKEKTYMKLVVLLGKSGEPERARQLFVKMVEEGLEPTKELYDALIAA 190
           +V   + E    +P   T   ++ L G  G+ E   + + K    G+EP    ++ LI A
Sbjct: 271 KVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGA 330

Query: 191 YSKNNAISEAFAILEQMKTLPLCQPDVNTFNILIKACIDDWRFDLVDSLYGQMDERPITP 370
           Y K     +  +++E M+ L       +T+N +I+A  D      ++  + QM    +  
Sbjct: 331 YGKKRMYDKMSSVMEYMRKLQFPWT-TSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKA 389

Query: 371 NTFTHTIVLSGYGKAGRYEQMEKIFSGMLVSTTCMPDVWTM-NTILSLFGKKGQIEMMEK 547
           +T T   ++ GY  AG + ++  + S  L     +P+  +  N ++S   K   +  ME+
Sbjct: 390 DTKTFCCLIRGYANAGLFHKV--VSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMER 447

Query: 548 WYEKFCNFGIEPVSPTFDILISAYGKTHMYDKM 646
            + +  +   +P S T+ I++ AY K  M DK+
Sbjct: 448 VFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKI 480


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  372 bits (956), Expect = e-101
 Identities = 181/249 (72%), Positives = 209/249 (83%)
 Frame = +2

Query: 2   QALEVFEMLREQPFYQPKEKTYMKLVVLLGKSGEPERARQLFVKMVEEGLEPTKELYDAL 181
           QALEVFEMLREQPFYQPKE TYMKL+VLLGKSG+P RA +LF  MVEEG EPT ELY AL
Sbjct: 126 QALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELYTAL 185

Query: 182 IAAYSKNNAISEAFAILEQMKTLPLCQPDVNTFNILIKACIDDWRFDLVDSLYGQMDERP 361
           +A+Y ++N I EAF+IL QMKTLP CQPDV T++ L+KAC+D  RF+LV+SLY +MD R 
Sbjct: 186 LASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRS 245

Query: 362 ITPNTFTHTIVLSGYGKAGRYEQMEKIFSGMLVSTTCMPDVWTMNTILSLFGKKGQIEMM 541
           ITPNT T  IVLSGYGKAG++++MEK+ SGML ST+  PDVWTMNTILSLFG KGQIE+M
Sbjct: 246 ITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIM 305

Query: 542 EKWYEKFCNFGIEPVSPTFDILISAYGKTHMYDKMLLVMGYMRKLSLPWTTSTYNNIIDV 721
           EKWYEKF NFGIEP + TF+ILI AYGK  MYDKM  VM YMRKL  PWTTSTYNN+I+ 
Sbjct: 306 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 365

Query: 722 FAEVGDAKN 748
           F++VGDAKN
Sbjct: 366 FSDVGDAKN 374



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
 Frame = +2

Query: 11  EVFEMLREQPFYQPKEKTYMKLVVLLGKSGEPERARQLFVKMVEEGLEPTKELYDALIAA 190
           +V   + E    +P   T   ++ L G  G+ E   + + K    G+EP    ++ LI A
Sbjct: 271 KVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGA 330

Query: 191 YSKNNAISEAFAILEQMKTLPLCQPDVNTFNILIKACIDDWRFDLVDSLYGQMDERPITP 370
           Y K     +  +++E M+ L       +T+N +I+A  D      ++  + QM    +  
Sbjct: 331 YGKKRMYDKMSSVMEYMRKLQFPWT-TSTYNNVIEAFSDVGDAKNMEYTFDQMRAEGMKA 389

Query: 371 NTFTHTIVLSGYGKAGRYEQMEKIFSGMLVSTTCMPDVWTM-NTILSLFGKKGQIEMMEK 547
           +T T   ++ GY  AG + ++  + S  L     +P+  +  N ++S   K   +  ME+
Sbjct: 390 DTKTFCCLIRGYANAGLFHKV--VSSVQLAGKFEIPENTSFYNAVISACAKAEDLIEMER 447

Query: 548 WYEKFCNFGIEPVSPTFDILISAYGKTHMYDKM 646
            + +  +   +P S T+ I++ AY K  M DK+
Sbjct: 448 VFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKI 480


>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
           gi|449522692|ref|XP_004168360.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
          Length = 496

 Score =  369 bits (947), Expect = e-100
 Identities = 179/249 (71%), Positives = 205/249 (82%)
 Frame = +2

Query: 2   QALEVFEMLREQPFYQPKEKTYMKLVVLLGKSGEPERARQLFVKMVEEGLEPTKELYDAL 181
           QALEVFEMLREQPFY+PKE TYMKL+VLLG+SG+P RAR LF  MV+E  EPT ELY AL
Sbjct: 124 QALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVQERCEPTPELYTAL 183

Query: 182 IAAYSKNNAISEAFAILEQMKTLPLCQPDVNTFNILIKACIDDWRFDLVDSLYGQMDERP 361
           +AAY +NN I +AF+ L  MKTLP CQPDV T++ILIKAC+DD RF++V+SLY +M ER 
Sbjct: 184 LAAYCRNNLIDDAFSTLNLMKTLPRCQPDVYTYSILIKACVDDSRFEIVESLYEEMAERL 243

Query: 362 ITPNTFTHTIVLSGYGKAGRYEQMEKIFSGMLVSTTCMPDVWTMNTILSLFGKKGQIEMM 541
           ITPNT T  IVLSGYGK G+Y+QMEK+  GML STTC PDVWTMN ILS+FG KG IEMM
Sbjct: 244 ITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGHIEMM 303

Query: 542 EKWYEKFCNFGIEPVSPTFDILISAYGKTHMYDKMLLVMGYMRKLSLPWTTSTYNNIIDV 721
           E+WYEKF NFGIEP + TF+ILI AYGK  MYDKM  VM YMRKL  PWTTSTYNN+I+ 
Sbjct: 304 ERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEA 363

Query: 722 FAEVGDAKN 748
           FA+VGDAKN
Sbjct: 364 FADVGDAKN 372


>ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2750; Flags: Precursor
           gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein
           [Arabidopsis thaliana] gi|20466300|gb|AAM20467.1|
           unknown protein [Arabidopsis thaliana]
           gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis
           thaliana] gi|332640870|gb|AEE74391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 486

 Score =  365 bits (937), Expect = 5e-99
 Identities = 175/249 (70%), Positives = 209/249 (83%)
 Frame = +2

Query: 2   QALEVFEMLREQPFYQPKEKTYMKLVVLLGKSGEPERARQLFVKMVEEGLEPTKELYDAL 181
           QALEVF+MLREQ FYQPKE TYMKL+VLLGKSG+P RA++LF +M+EEGLEPT ELY AL
Sbjct: 106 QALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTAL 165

Query: 182 IAAYSKNNAISEAFAILEQMKTLPLCQPDVNTFNILIKACIDDWRFDLVDSLYGQMDERP 361
           +AAY+++N I +AF+IL++MK+ P CQPDV T++ L+KAC+D  +FDLVDSLY +MDER 
Sbjct: 166 LAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERL 225

Query: 362 ITPNTFTHTIVLSGYGKAGRYEQMEKIFSGMLVSTTCMPDVWTMNTILSLFGKKGQIEMM 541
           ITPNT T  IVLSGYG+ GR++QMEK+ S MLVST C PDVWTMN ILS+FG  G+I+MM
Sbjct: 226 ITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMM 285

Query: 542 EKWYEKFCNFGIEPVSPTFDILISAYGKTHMYDKMLLVMGYMRKLSLPWTTSTYNNIIDV 721
           E WYEKF NFGIEP + TF+ILI +YGK  MYDKM  VM YMRKL  PWTTSTYNNII+ 
Sbjct: 286 ESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEA 345

Query: 722 FAEVGDAKN 748
           FA+VGDAKN
Sbjct: 346 FADVGDAKN 354



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 1/211 (0%)
 Frame = +2

Query: 47  QPKEKTYMKLVVLLGKSGEPERARQLFVKMVEEGLEPTKELYDALIAAYSKNNAISEAFA 226
           +P   T   ++ + G  G+ +     + K    G+EP    ++ LI +Y K     +  +
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSS 322

Query: 227 ILEQMKTLPLCQPDVNTFNILIKACIDDWRFDLVDSLYGQMDERPITPNTFTHTIVLSGY 406
           ++E M+ L       +T+N +I+A  D      ++  + QM    +  +T T   +++GY
Sbjct: 323 VMEYMRKLEFPWT-TSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGY 381

Query: 407 GKAGRYEQMEKIFSGMLVSTTCMPDVWTM-NTILSLFGKKGQIEMMEKWYEKFCNFGIEP 583
             AG + ++  I S  L +   +P+     N ++S   K   +  ME+ Y +        
Sbjct: 382 ANAGLFHKV--ISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVC 439

Query: 584 VSPTFDILISAYGKTHMYDKMLLVMGYMRKL 676
            S TF+I++ AY K  M DK+  +    +KL
Sbjct: 440 DSRTFEIMVEAYEKEGMNDKIYYLEQERQKL 470