BLASTX nr result
ID: Lithospermum22_contig00026844
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00026844 (800 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_201036.1| 40S ribosomal protein S20-1 [Arabidopsis thalia... 64 3e-08 ref|XP_002877555.1| 40S ribosomal protein S20 [Arabidopsis lyrat... 64 3e-08 ref|XP_002866483.1| 40S ribosomal protein S20 [Arabidopsis lyrat... 64 3e-08 ref|XP_002866482.1| 40S ribosomal protein S20 [Arabidopsis lyrat... 64 3e-08 emb|CBI24538.3| unnamed protein product [Vitis vinifera] 64 3e-08 >ref|NP_201036.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] gi|22331606|ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] gi|145334871|ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] gi|21542443|sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 gi|11762182|gb|AAG40369.1|AF325017_1 AT5g62300 [Arabidopsis thaliana] gi|13877519|gb|AAK43837.1|AF370460_1 40S ribosomal protein S20 [Arabidopsis thaliana] gi|20465624|gb|AAM20143.1| putative 40S ribsomomal protein [Arabidopsis thaliana] gi|21281054|gb|AAM45072.1| putative 40S ribsomomal protein [Arabidopsis thaliana] gi|21553799|gb|AAM62892.1| ribosomal protein S20-like protein [Arabidopsis thaliana] gi|332010210|gb|AED97593.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] gi|332010211|gb|AED97594.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] gi|332644460|gb|AEE77981.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] Length = 124 Score = 64.3 bits (155), Expect = 3e-08 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 7/47 (14%) Frame = +2 Query: 563 GTNTFYRFELCVHKRVIDLFS-------ITSITIQPGVEVEVTIADS 682 GTNT+ RFEL VHKRVIDLFS ITSITI+PGVEVEVTIADS Sbjct: 78 GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 124 >ref|XP_002877555.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata] gi|297323393|gb|EFH53814.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata] Length = 122 Score = 64.3 bits (155), Expect = 3e-08 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 7/47 (14%) Frame = +2 Query: 563 GTNTFYRFELCVHKRVIDLFS-------ITSITIQPGVEVEVTIADS 682 GTNT+ RFEL VHKRVIDLFS ITSITI+PGVEVEVTIADS Sbjct: 76 GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 122 >ref|XP_002866483.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata] gi|297312318|gb|EFH42742.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata] Length = 124 Score = 64.3 bits (155), Expect = 3e-08 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 7/47 (14%) Frame = +2 Query: 563 GTNTFYRFELCVHKRVIDLFS-------ITSITIQPGVEVEVTIADS 682 GTNT+ RFEL VHKRVIDLFS ITSITI+PGVEVEVTIADS Sbjct: 78 GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 124 >ref|XP_002866482.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata] gi|297312317|gb|EFH42741.1| 40S ribosomal protein S20 [Arabidopsis lyrata subsp. lyrata] Length = 123 Score = 64.3 bits (155), Expect = 3e-08 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 7/47 (14%) Frame = +2 Query: 563 GTNTFYRFELCVHKRVIDLFS-------ITSITIQPGVEVEVTIADS 682 GTNT+ RFEL VHKRVIDLFS ITSITI+PGVEVEVTIADS Sbjct: 77 GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 123 >emb|CBI24538.3| unnamed protein product [Vitis vinifera] Length = 117 Score = 64.3 bits (155), Expect = 3e-08 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 7/47 (14%) Frame = +2 Query: 563 GTNTFYRFELCVHKRVIDLFS-------ITSITIQPGVEVEVTIADS 682 GTNT+ RFEL VHKRVIDLFS ITSITI+PGVEVEVTIADS Sbjct: 71 GTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 117