BLASTX nr result

ID: Lithospermum22_contig00026834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026834
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    53   2e-11
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    53   2e-11
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    64   4e-10
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    51   5e-10
ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    68   2e-09

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 52.8 bits (125), Expect(2) = 2e-11
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = +3

Query: 216  VVLQRLPTKDRLKAWNVVQDDKCVFC-GNVESMDHLFFGCNYTKVVLRKIMMYNHKYHQP 392
            VV Q+L T+D+L  + +   ++C  C  N E  +HLFF C+YTK +   +          
Sbjct: 895  VVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMT 954

Query: 393  RSWKEELHDIVVKNGGKSLSSQVLKLSFSCAIYYI 497
            + W E +    V   GKS  +   KLSF+  +Y++
Sbjct: 955  KGWDEWIRWATVSWHGKSFINFSRKLSFAATVYHV 989



 Score = 41.6 bits (96), Expect(2) = 2e-11
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +1

Query: 73  DSLVWIN--NQQFSCTKVWHKLRDDEEKVGWFKVVWSKGNVPSHYVIMLML 219
           D ++W++  N +FS    W +LR   + V W  +VW K  VP H  ++ M+
Sbjct: 845 DEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMV 895


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 52.8 bits (125), Expect(2) = 2e-11
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = +3

Query: 216 VVLQRLPTKDRLKAWNVVQDDKCVFC-GNVESMDHLFFGCNYTKVVLRKIMMYNHKYHQP 392
           VV Q+L T+D+L  + +   ++C  C  N E  +HLFF C+YTK +   +          
Sbjct: 180 VVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMT 239

Query: 393 RSWKEELHDIVVKNGGKSLSSQVLKLSFSCAIYYI 497
           + W E +    V   GKS  +   KLSF+  +Y++
Sbjct: 240 KGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHV 274



 Score = 41.6 bits (96), Expect(2) = 2e-11
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +1

Query: 73  DSLVWIN--NQQFSCTKVWHKLRDDEEKVGWFKVVWSKGNVPSHYVIMLML 219
           D +VW++  N +FS    W +LR     V W  +VW K  VP H  ++ M+
Sbjct: 130 DEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMV 180


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 63.5 bits (153), Expect(2) = 4e-10
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = +3

Query: 225  QRLPTKDRLKAWNVVQDDKCVFCGNV-ESMDHLFFGCNYTKVVLRKIMMYNHKYHQPRSW 401
            ++L TKDRL+ + ++Q   C  C    ES++HLFF C+ T+ +   I+ +  + H PR W
Sbjct: 1188 KKLSTKDRLRRFRMIQSSDCSICNCADESINHLFFNCSGTREIWGNILDWLGRRHDPREW 1247

Query: 402  KEELHDIVVKNGGKSLSSQVLKLSFSCAIYYI 497
              EL  I+    GK   S +LK++ +  +Y +
Sbjct: 1248 DMELAWIIENTKGKGWKSALLKMATAETVYNV 1279



 Score = 26.6 bits (57), Expect(2) = 4e-10
 Identities = 9/47 (19%), Positives = 24/47 (51%)
 Frame = +1

Query: 88   INNQQFSCTKVWHKLRDDEEKVGWFKVVWSKGNVPSHYVIMLMLCFR 228
            ++ Q+F  + ++H L ++ ++V W  V+      P   + + + C +
Sbjct: 1142 LSRQKFPMSAMYHGLTEEHQRVSWRSVMCGNKARPRAVICLWLACHK 1188


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 50.8 bits (120), Expect(2) = 5e-10
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
 Frame = +3

Query: 219  VLQRLPTKDRLKAWNVVQDDKCVFC-GNVESMDHLFFGCNYTKVVLRKIMMYNHKYHQPR 395
            V Q+L T+D+L  + +   ++C  C  N E  +HLFF C+YTK +   +          +
Sbjct: 1236 VQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTK 1295

Query: 396  SWKEELHDIVVKNGGKSLSSQVLKLSFSCAIYYI 497
             W E +    V   GKS  +   KLSF+  +Y++
Sbjct: 1296 GWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHV 1329



 Score = 38.9 bits (89), Expect(2) = 5e-10
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 73   DSLVWIN--NQQFSCTKVWHKLRDDEEKVGWFKVVWSKGNVPSHYVIMLM 216
            D +VW++  N +F     W  LR   + V W  +VW K  VP H  ++ M
Sbjct: 1185 DEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWM 1234


>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 35/99 (35%), Positives = 53/99 (53%)
 Frame = +3

Query: 228 RLPTKDRLKAWNVVQDDKCVFCGNVESMDHLFFGCNYTKVVLRKIMMYNHKYHQPRSWKE 407
           RL TK+RL  + +V D +C FC  VE++ HL F C     + +K++ + +  H+P  W +
Sbjct: 275 RLATKERLYRFGIVNDARCAFCEEVETVQHLLFECGEMYAIWKKVLDWLNVDHEPAGWLQ 334

Query: 408 ELHDIVVKNGGKSLSSQVLKLSFSCAIYYI*CGCSRVWK 524
           EL  I   + GK+  S+ LK SF   +Y       R WK
Sbjct: 335 ELDWIEDTSKGKNWKSRFLKTSFVETVY-------RCWK 366


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