BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00026814
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870452.1| hypothetical protein ARALYDRAFT_355577 [Arab...   103   2e-20
ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumi...   103   3e-20
ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumi...   103   3e-20
dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana]     100   3e-19
ref|NP_198440.2| exosome complex exonuclease RRP6 [Arabidopsis t...   100   3e-19

>ref|XP_002870452.1| hypothetical protein ARALYDRAFT_355577 [Arabidopsis lyrata subsp.
           lyrata] gi|297316288|gb|EFH46711.1| hypothetical protein
           ARALYDRAFT_355577 [Arabidopsis lyrata subsp. lyrata]
          Length = 867

 Score =  103 bits (258), Expect = 2e-20
 Identities = 58/139 (41%), Positives = 88/139 (63%), Gaps = 4/139 (2%)
 Frame = -2

Query: 405 IDE--ISEKAKLLQNIVSKNQLNSCVSKLSLSARGIPHGKDFHFYNNFDDFMSNVLIVDE 232
           +DE  +S K K L+ +V     +S +SKLS S+R IP  +DFHFY NFD+F   +  +  
Sbjct: 8   VDESPVSWKVKSLETLVD-GSFSSTLSKLSSSSRLIPSSRDFHFYYNFDEFKRPIDDIAG 66

Query: 231 NAEKIIKKIGEASELWPGRDLGFGVECSEMDVDGDEWLVNVNDEVFELIDSSIDEFKDVR 52
           +++ +++ IG++ ++W G+ + F  +  E  VD ++WL NVNDE  E  D S+DEF+ +R
Sbjct: 67  SSQSVLETIGDSEQVW-GKSMKFPGDVDE--VDAEDWLCNVNDEFIERFDVSVDEFQRIR 123

Query: 51  KKGEESG--VGGRGDDGFK 1
           KK EE G  V   GDDGF+
Sbjct: 124 KKEEEIGRPVAYNGDDGFQ 142


>ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumis sativus]
          Length = 935

 Score =  103 bits (256), Expect = 3e-20
 Identities = 57/138 (41%), Positives = 87/138 (63%), Gaps = 7/138 (5%)
 Frame = -2

Query: 393 SEKAKLLQNIVSKNQLNSCVSKLSLSARGIPHGKDFHFYNNFDDFMSNVLIVDENAEKII 214
           S+KA+ LQ++ +   L S +SKL+ S+R IP  KDFHFY NFD+F   +  ++  ++ ++
Sbjct: 8   SQKAQTLQSLTT-GSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIERQSQSML 66

Query: 213 KKIGEASELWPGRDLGFGVECSEMDVDGDEWLVNVNDEVFELIDSSIDEFKDVRKKGEES 34
           + IG ++E+W G+++ F     E   D  +WLVNVNDE+FE  D S+DEF+ +RK+ EE 
Sbjct: 67  ETIGSSAEVW-GKEMAF----PEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEEE 121

Query: 33  GVGGRG-------DDGFK 1
              GR        DDGF+
Sbjct: 122 --SGRALALTADPDDGFQ 137


>ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumis sativus]
          Length = 936

 Score =  103 bits (256), Expect = 3e-20
 Identities = 57/138 (41%), Positives = 87/138 (63%), Gaps = 7/138 (5%)
 Frame = -2

Query: 393 SEKAKLLQNIVSKNQLNSCVSKLSLSARGIPHGKDFHFYNNFDDFMSNVLIVDENAEKII 214
           S+KA+ LQ++ +   L S +SKL+ S+R IP  KDFHFY NFD+F   +  ++  ++ ++
Sbjct: 8   SQKAQTLQSLTT-GSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIERQSQSML 66

Query: 213 KKIGEASELWPGRDLGFGVECSEMDVDGDEWLVNVNDEVFELIDSSIDEFKDVRKKGEES 34
           + IG ++E+W G+++ F     E   D  +WLVNVNDE+FE  D S+DEF+ +RK+ EE 
Sbjct: 67  ETIGSSAEVW-GKEMAF----PEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEEE 121

Query: 33  GVGGRG-------DDGFK 1
              GR        DDGF+
Sbjct: 122 --SGRALALTADPDDGFQ 137


>dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana]
          Length = 578

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 54/140 (38%), Positives = 86/140 (61%), Gaps = 5/140 (3%)
 Frame = -2

Query: 405 IDE--ISEKAKLLQNIVSKNQLNSCVSKLSLSARGIPHGKDFHFYNNFDDFMSNVLIVDE 232
           +DE  +S K K L+ ++  +  +S +S+LS S+R IP  +DFHFY NFD+F   +  +  
Sbjct: 8   VDESPVSWKVKSLEKLIDGSSFSSTLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEITG 67

Query: 231 NAEKIIKKIGEASELWPGRDLGFGVECSEMDVDGDEWLVNVNDEVFELIDSSIDEFKDVR 52
            ++  +  IG++ ++W G+ + F  +    DV  ++WL NVNDE+ E  D S+DEF+ +R
Sbjct: 68  TSQSTLATIGDSEQVW-GKSMKFPGDVD--DVYAEDWLCNVNDELIERFDVSVDEFQRIR 124

Query: 51  KKGEESG---VGGRGDDGFK 1
           KK +E G   V   GDDGF+
Sbjct: 125 KKEKEIGRSVVADDGDDGFQ 144


>ref|NP_198440.2| exosome complex exonuclease RRP6 [Arabidopsis thaliana]
           gi|160892401|gb|ABX52080.1| RRP6-like protein 2
           [Arabidopsis thaliana] gi|332006642|gb|AED94025.1|
           exosome complex exonuclease RRP6 [Arabidopsis thaliana]
          Length = 870

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 54/140 (38%), Positives = 86/140 (61%), Gaps = 5/140 (3%)
 Frame = -2

Query: 405 IDE--ISEKAKLLQNIVSKNQLNSCVSKLSLSARGIPHGKDFHFYNNFDDFMSNVLIVDE 232
           +DE  +S K K L+ ++  +  +S +S+LS S+R IP  +DFHFY NFD+F   +  +  
Sbjct: 8   VDESPVSWKVKSLEKLIDGSSFSSTLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEITG 67

Query: 231 NAEKIIKKIGEASELWPGRDLGFGVECSEMDVDGDEWLVNVNDEVFELIDSSIDEFKDVR 52
            ++  +  IG++ ++W G+ + F  +    DV  ++WL NVNDE+ E  D S+DEF+ +R
Sbjct: 68  TSQSTLATIGDSEQVW-GKSMKFPGDVD--DVYAEDWLCNVNDELIERFDVSVDEFQRIR 124

Query: 51  KKGEESG---VGGRGDDGFK 1
           KK +E G   V   GDDGF+
Sbjct: 125 KKEKEIGRSVVADDGDDGFQ 144